LOC120575705


Basic Information

Item Value
gene id LOC120575705
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3347620 ~ 3354553 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826535.1
ATGAAGATCTTTGTGAGTTTTACGCTGTGGCTGCTGCTCGGCTGCGTCTCCGCAAATGAAAGGGTTGAAAGCCAGCTGACTTTTCCTCAAGACATCTACACTGCGCTGAGAGAGATGACCGCTTCGTTGGTTCAACTGAAGGCGGACATGACGCTGCAGACTCAAGaacaagtacagctgaagacTGAAGTGGAGAATCTGAAGCAACAACAGAGAGAACAAGCAGCACAGCAGAAGACTGAAGTGGACGAGCTGAAGCGACAACAGATAGtccgaCAGGTTGCATTCACAGCCTCACTGGTGGTTGCAGGTGAAACAACTTTAGGACCCTTTCCCTCGGACACTACCCTGATCTACAAACACGTGCCCACCAACATTGGAAATGCCTACAACTCAAACACAGGTGTGTTCACTGCCCCGGTGAGAGGAGCGTACAACTTTGAGTGGTCGGTCGGTGCACGTGGAGATGGCAGCCACGGTTCAGGTGCTTGGTTGGTCAAGAACTCCGAGAATGTTTTCATGGCATGGGAGCGACAGATTCAATATCATGGGACTGCTTCTAAAGGCGTTACGCTGCTCCTGGAGGTGGGAGACGTCGTGTTTGTGCGTCTGGTGGCTAACACTTTGGCGTTTGACGACAAAGATCACCACGCCACCTTCAGTGGGCATCTGCTGTTCCCCATGTGAGACAgaaacagcagctctgtgataGTTACGCAGGATTTTGTTGTCTTAAACAAGTCTTCATAGCACTTCATAGATTTTCTCTGATTTCATCTGCATCCAAATATTAATGAGTAActagaaaatgcgtgggaatgctgaacagctgaattgctaaagctaactggttgaatagcttaaatacgtAAAATGAAgatgaagtagtgaaaatagttgaaaaagtaggaatggttttaattaacTTAAATTTCATATCATAGTACCACTAATGTACAAAATATGTGGAATAATTCCAAGTTTTTTTGAAAAGCTTATgttaaagctaaactggattgctggtaAAAATGTATAAGAAAAAGGTGAAGTTGTCAGacagacggacggacggacagaggaaagaggaaagagagaggacagagaaagaggacagataacagagaaagagaacagaaagagaaagaagacagagaaagaggacagagaacagaaagaggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826535.1 True 1180 mRNA 0.45 5 3347620 3354553

Neighbor

gene id symbol gene type direction distance location
ncbp3 LOC102780188 coding downstream 261403 3070070 ~ 3086217 (-)
LOC120543768 NA coding downstream 409868 2924482 ~ 2937752 (-)
LOC120543771 NA coding downstream 449158 2873229 ~ 2898462 (-)
LOC120543770 NA coding downstream 463051 2882355 ~ 2884569 (-)
LOC120544248 NA coding downstream 479290 2855026 ~ 2868330 (-)
trnad-guc_8 NA coding upstream 50634 3405187 ~ 3405258 (-)
trnav-aac_3 NA coding upstream 51477 3406030 ~ 3406102 (-)
trnav-cac NA coding upstream 55253 3409806 ~ 3409878 (-)
trnav-cac_1 NA coding upstream 61813 3416366 ~ 3416438 (-)
trnai-aau_27 NA coding upstream 70060 3424613 ~ 3424685 (-)
G162913 NA non-coding downstream 712 3344675 ~ 3346908 (-)
G162981 NA non-coding downstream 8510 3336511 ~ 3339110 (-)
G162970 NA non-coding downstream 39668 3289059 ~ 3307952 (-)
G162967 NA non-coding downstream 61942 3283343 ~ 3285678 (-)
G162951 NA non-coding downstream 125525 3165285 ~ 3222095 (-)
LOC120543535 NA non-coding upstream 8473 3363026 ~ 3365172 (-)
trnav-aac_5 NA non-coding upstream 98216 3452769 ~ 3452841 (-)
trnav-cac_2 NA non-coding upstream 99971 3454524 ~ 3454596 (-)
trnav-aac_6 NA non-coding upstream 104370 3458923 ~ 3458995 (-)
trnav-cac_3 NA non-coding upstream 104989 3459542 ~ 3459614 (-)
LOC120544249 alg8 other downstream 114338 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 149372 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 252146 3037923 ~ 3095474 (-)
G162910 NA other downstream 518026 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 696217 2342150 ~ 2651403 (-)
G163259 NA other upstream 515772 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 793310 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 927220 4281773 ~ 4821872 (-)
G163334 NA other upstream 948013 4302566 ~ 4304048 (-)
G163315 NA other upstream 980290 4334843 ~ 4820499 (-)

Expression


Co-expression Network