LOC120544182


Basic Information

Item Value
gene id LOC120544182
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 1383060 ~ 1405479 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636466.1
CACACCGAGAGCTGAAGGTTTTACCCTGAAAATTTTCTccagttgatccagactagaCTTCTGATAGGGAGACACTATGGCATCATGCTTCTAGCTGTCAAACAAATACAATAGTGTACCTTTGTAACTTAGTGAATCTGATCCTTTTTCTCCAGCAGGTCCTCTGATCCACCGACATGGACCCAGTTCCTCCTCCAAATTCTActgccCGGAGGGTGGTGCTGATCGGTCTTCCTGGAGCTGGAAAAAGTTCCTCTGGGAACACCATCTTAAGATCAGATCAGTTTAAATCAGGAGGTGACTTTGATTCAGTCACTACTGAGACTGTCTCTAAGTCAGCCATAGTGGAGGGTCGTCGGGTCACGGTGGTCGATACTCCAGGATTCACTGATCCGACTGGTGAACAGCTGTATGAGGGGATCATGAAGTCAGTAGTAGAGGCCAGTCCAGGACCTCATGCCTTTGTTATTGTGGTCAGAATAGGAAGAATCACAGAAACAGACATCAAACTGTTCAAGCTGCTGGAACAAATATTCACCAAGACTGCTATGAAGTACTTCATGGTGCTTTTCACTCGGCAGGCGAGCTGGGAGGTCAGTCCATTAATAATTTCATTGATTCCAACAAACATGTTGAAAGACCTGGTTGACATGTGTGGTAATAGATTCTGTGTGTTTGACAAcaaaaccataacaaacagagcCCAGGTCAGTGTCTTCCTGGAAAAAGTACATGAGATGTTCTCAGGTAACAATGGAGACCCAAACTGAACTAAAGAACGTGTCAGAAAGCAGTATAATAGGGTttcttaaaaacacatttatcaaGATAGCTAACAAAGCAGCAGGAGTAGCaatagtagcagcagtagcagctaTACCAGCAGGGACAACAGAGATAATGGCCGCGTATTGATGGAAGTATTGAAGGTAGTATTGAAGGACAAATTGAAGGAAGTATTGATGGCAGTAGTGAGTGTAGTATTGAATGTAGTAGGGAAGGCAGAAATAAATGCAGTAGAGGGGAAGTAGTGAAGGCAGCAGTGAAGAAGCAGTGAAGAAAGCAGTGAAGAAAGCAGTGAAGGAATTAGTGAATAGAGTGATGGCAGTAGTGGAGAAAGTATGGCAGTAGTGAATTAATAGTAGAAGAATTAGGACTATCAATAGTGAAAGGAGTAAACCTAGAAACGATAGCAAAAGCAATAACAACAGGAGTAACAGTAGCAAAATCtatagtagcagcagcagcggaggAAGACAATGCAGTAGTAAAAGCACTTAAACAAGTAGAAACAGTATTAGAAGGATTAGCAGCTGCGCAGCGCAACAGTAGAAAAGACAGGAGTAGCAGTGGGGGAATGGCTTGTCAGCAGCAGGAGTCGTATGAGCACGAGCACTCATGTGATGGGTTCTGTTTTATATGGCGTTATGTAATTAAAAGTTGATTTCAA
>XR_005636467.1
gagcttttattttgaaatctgaTCATGTCTGTATGCACATCTCTTCAGAGTGAGAAGCAGATCAGAAGAGTAAGAGAGATCGTTGTGTTGTTATCAGGGAgttggttttattgtttatttcttcacaccTGAGCAGCAGGTCCTCTGATCCACCGACATGGACCCAGTTCCTCCTCCAAATTCTActgccCGGAGGGTGGTGCTGATCGGTCTTCCTGGAGCTGGAAAAAGTTCCTCTGGGAACACCATCTTAAGATCAGATCAGTTTAAATCAGGAGGTGACTTTGATTCAGTCACTACTGAGACTGTCTCTAAGTCAGCCATAGTGGAGGGTCGTCGGGTCACGGTGGTCGATACTCCAGGATTCACTGATCCGACTGGTGAACAGCTGTATGAGGGGATCATGAAGTCAGTAGTAGAGGCCAGTCCAGGACCTCATGCCTTTGTTATTGTGGTCAGAATAGGAAGAATCACAGAAACAGACATCAAACTGTTCAAGCTGCTGGAACAAATATTCACCAAGACTGCTATGAAGTACTTCATGGTGCTTTTCACTCGGCAGGCGAGCTGGGAGGTCAGTCCATTAATAATTTCATTGATTCCAACAAACATGTTGAAAGACCTGGTTGACATGTGTGGTAATAGATTCTGTGTGTTTGACAAcaaaaccataacaaacagagcCCAGGTCAGTGTCTTCCTGGAAAAAGTACATGAGATGTTCTCAGGTAACAATGGAGACCCAAACTGAACTAAAGAACGTGTCAGAAAGCAGTATAATAGGGTttcttaaaaacacatttatcaaGATAGCTAACAAAGCAGCAGGAGTAGCaatagtagcagcagtagcagctaTACCAGCAGGGACAACAGAGATAATGGCCGCGTATTGATGGAAGTATTGAAGGTAGTATTGAAGGACAAATTGAAGGAAGTATTGATGGCAGTAGTGAGTGTAGTATTGAATGTAGTAGGGAAGGCAGAAATAAATGCAGTAGAGGGGAAGTAGTGAAGGCAGCAGTGAAGAAGCAGTGAAGAAAGCAGTGAAGAAAGCAGTGAAGGAATTAGTGAATAGAGTGATGGCAGTAGTGGAGAAAGTATGGCAGTAGTGAATTAATAGTAGAAGAATTAGGACTATCAATAGTGAAAGGAGTAAACCTAGAAACGATAGCAAAAGCAATAACAACAGGAGTAACAGTAGCAAAATCtatagtagcagcagcagcggaggAAGACAATGCAGTAGTAAAAGCACTTAAACAAGTAGAAACAGTATTAGAAGGATTAGCAGCTGCGCAGCGCAACAGTAGAAAAGACAGGAGTAGCAGTGGGGGAATGGCTTGTCAGCAGCAGGAGTCGTATGAGCACGAGCACTCATGTGATGGGTTCTGTTTTATATGGCGTTATGTAATTAAAAGTTGATTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636466.1 True 1450 lncRNA 0.43 3 1383060 1389821
XR_005636467.1 False 1431 lncRNA 0.43 4 1383060 1405479

Neighbor

gene id symbol gene type direction distance location
ins ins,LOC108250678,LOC103130811,LOC106937878,LOC103476384 coding downstream 136095 1244526 ~ 1246965 (-)
nipal4 NA coding downstream 139896 1222848 ~ 1243164 (-)
LOC120544169 NA coding downstream 256979 1123379 ~ 1126081 (-)
LOC120544177 NA coding downstream 399332 983394 ~ 983728 (-)
LOC120544156 NA coding downstream 567471 806151 ~ 815589 (-)
LOC120544175 NA coding upstream 12588 1418067 ~ 1422208 (-)
LOC120544170 NA coding upstream 81924 1487403 ~ 1490956 (-)
LOC120544166 NA coding upstream 296297 1701776 ~ 1724485 (-)
LOC120544161 NA coding upstream 332842 1738321 ~ 1747929 (-)
LOC120544174 NA coding upstream 407935 1813414 ~ 1820635 (-)
G162397 NA non-coding downstream 20835 1361983 ~ 1362225 (-)
G162395 NA non-coding downstream 32997 1349369 ~ 1350063 (-)
LOC120544185 NA non-coding downstream 45203 1320310 ~ 1337857 (-)
G162360 NA non-coding downstream 68768 1310662 ~ 1314292 (-)
G162372 NA non-coding downstream 93711 1284949 ~ 1289349 (-)
G162403 NA non-coding upstream 48418 1453897 ~ 1454203 (-)
G162405 NA non-coding upstream 63396 1468875 ~ 1469120 (-)
G162745 NA non-coding upstream 118498 1523977 ~ 1524530 (-)
LOC120544188 NA non-coding upstream 274419 1679898 ~ 1695688 (-)
G162774 NA non-coding upstream 307027 1712506 ~ 1730625 (-)
G162396 NA other downstream 24537 1358186 ~ 1358523 (-)
G162358 NA other downstream 72444 1192802 ~ 1310616 (-)
G162359 NA other downstream 181626 1196113 ~ 1201434 (-)
G162352 NA other downstream 264372 1117073 ~ 1118688 (-)
chm chm,LOC104936337,LOC106675663,LOC101479632,LOC108251494 other downstream 492650 859932 ~ 890410 (-)
G162399 NA other upstream 31774 1437253 ~ 1440818 (-)
G162787 NA other upstream 430490 1835969 ~ 1836502 (-)
LOC120544171 NA other upstream 482150 1887629 ~ 1891423 (-)
LOC120543939 NA other upstream 936671 2342150 ~ 2651403 (-)
G162910 NA other upstream 1421610 2827089 ~ 2829594 (-)

Expression


Co-expression Network