LOC120544187


Basic Information

Item Value
gene id LOC120544187
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 371982 ~ 378686 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636472.1
AGGGATCATTCTTCCTCCCTAAATTACCGTTTTTTCGGACCAAATGGAGCCGCTGCCCGCTGGAACTGTGGACACACTAACGGAGATATGTCGGTGTTACCATGGAGACAGAAACGGAGACGTTTCGGAAGGAGTTCCAGAAGAAGATGAACACTAAACCTGTCTGATAGAAGAAGTTCACCAGACAACAGGATGTCCTTCTTTAATCCCCTCATCAGaggtcgaccgatatggGTTTTCTCTGGCTGATGCCGGTCTTTAGAAATCAGGGTTAGCCGATAAATGCTGCAGATTAATTTTGGCCGATATGTGCTTcctctatttgaaagataaaatgtaACACTAATATACACAGAATTtctgaacaaaaacatttattgaacacttCACCAATCTACACTTGTATACttcaattaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636472.1 True 421 lncRNA 0.41 3 371982 378686

Neighbor

gene id symbol gene type direction distance location
LOC120544159 NA coding downstream 5733 362006 ~ 366249 (-)
LOC120544162 NA coding downstream 52367 312392 ~ 319615 (-)
LOC120544147 NA coding downstream 177627 185412 ~ 194355 (-)
mat2b mat2b coding upstream 13381 392067 ~ 427766 (-)
slc23a1 NA coding upstream 59265 437951 ~ 462468 (-)
oatx LOC103373994,LOC104932490 coding upstream 129451 508137 ~ 536952 (-)
pfdn1 pfdn1 coding upstream 181658 560344 ~ 568709 (-)
tmprss15 NA coding upstream 212348 591034 ~ 632939 (-)
G162242 NA non-coding downstream 15456 356211 ~ 356526 (-)
G162186 NA non-coding downstream 51164 320246 ~ 320818 (-)
G162185 NA non-coding downstream 107512 262633 ~ 264470 (-)
G162221 NA non-coding downstream 118992 250212 ~ 252990 (-)
G162218 NA non-coding downstream 122825 248672 ~ 249157 (-)
G162252 NA non-coding upstream 19137 397823 ~ 398179 (-)
G162258 NA non-coding upstream 83992 462678 ~ 462884 (-)
G162265 NA non-coding upstream 101787 480473 ~ 480767 (-)
G162269 NA non-coding upstream 155507 534193 ~ 535481 (-)
G162261 NA non-coding upstream 173712 552398 ~ 592059 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other downstream 215167 101803 ~ 156815 (-)
ndufa2 ndufa2 other downstream 271275 94635 ~ 100707 (-)
G162166 NA other downstream 348545 21716 ~ 23437 (-)
pwwp2a pwwp2a,slc23a1,LOC102781148,LOC103395589 other upstream 92406 471092 ~ 502104 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 165018 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 191549 570235 ~ 578849 (-)
G162311 rps14,RPS14,LOC100194652 other upstream 408085 786771 ~ 794731 (-)
LOC120544221 NA other upstream 450409 829095 ~ 844858 (-)

Expression


Co-expression Network