LOC120544582


Basic Information

Item Value
gene id LOC120544582
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4267381 ~ 4272158 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636515.1
CGGCCGACAGCAGCCGATTGGCCGAGCGGAAACATCTGGAGCGCCGGGAGCTGCTGGAGCgatcagagcagcagctcaTCAGCCTGAGAGCTTCACTTCAACAGGCAGTCCACGCTCTGAGCTCCGAGCTGGTGACCCACCTGTTGGTCCGAGACCAGCTGAGGACCAAGCAGGACGCCATGCTGCTGGACGTCCAGGACCTGACATaacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctacACCAGGACCTGACATaacaccaggaccagacctacACCAGGACCTGATGTAACACCAGGACCTGACATaacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctataacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctatAACACCAGGACCTGATGTaacaccaggaccagacctatAACACCAGGACCAGACCAATGACACCAGGACCAGACATAACACCAGGACCTGACCTACACCAGGACCTGACATAACACCAGGACCTGACCTATaacaccaggaccagacctacACCAGGACCTGACATAACACCAGGACCTGACCTATaacaccaggaccagacctacACCAGGACCTGACATAACACCAGGACCTGACCTATaacaccaggaccagacctacACCAGGACCTGACATAACACCAGGACCTGACCTACACCAGGACCTGACATAACACCAGGACCTGACCTACACCAGGACCTGACATaacaccaggaccagacctataacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctataacaccaggaccagacctatAACACCAGGACCTGACCTACACCAGGACCTGATGTaacaccaggaccagacctataacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctataacaccaggaccagacctacACCAGGACCTGATGTaacaccaggaccagacctataacaccaggaccagacctatAACACCAGGACCAGACATATGacaccaggaccagacctacACCAGGACCAGACCAATGACAGCAGGACCTGACAtacaccaggaccagacctacACCAGAACCAGAACTACACCAGGACCTGACATaacaccaggaccagacctacAGCAGGACCTGACAtacaccaggaccagacctacACCAGGACCAGAACTACACCAGGACCTGACATGCATCAGGACCAGACCTACACCAGGACCTGAACCTATAACACCAGAACCAGACATTACACCAGGACCTGATGTAACACCAGAACCTGAACCTATAACACCAGGACCTGAAGTAACACCAGGACCTGAACCTATAACACCAGGACCTGAAGTAACACCAGGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAAGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAGGACCTGAACCTATaacaccaggaccagacctacACCAGGACAAGACCTATAACACCAGGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAGGACCTGAACATCTAACACCAGAACCTGAACCTATAACACCAAAACCTGAACCTATAACACCAGGACTTGAAGTAACACCAGGACCTGAACCTATAACACCAGGACTTGAAGTAACACCAGGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAGGACCTGAACCTATaacaccaggaccagacctatACCAGGACCAGACCTATAACACCAGGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAGGACCTGAACCTATaacaccaggaccagacctacACCAGGACAAGACCTATAACACCAGGACCTGAACCTATaacaccaggaccagacctacaccaggaccagacctatAACACCAGGACCTGAACCTATAACACCAGGACCTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636515.1 True 2109 lncRNA 0.53 2 4267381 4272158

Neighbor

gene id symbol gene type direction distance location
LOC120544550 LOC101067509,LOC102791768 coding downstream 7222 4249126 ~ 4260159 (-)
LOC120544557 LOC104931097,LOC103374139,LOC102075861 coding downstream 59388 4198358 ~ 4207993 (-)
LOC120543691 NA coding downstream 130347 4127789 ~ 4137034 (-)
LOC120543692 NA coding downstream 142568 4112869 ~ 4124813 (-)
LOC120543678 NA coding downstream 381508 3868758 ~ 3885873 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding upstream 32768 4304926 ~ 4309915 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding upstream 193686 4465844 ~ 4466381 (-)
LOC120544559 NA coding upstream 196042 4468200 ~ 4468934 (-)
LOC120544570 LOC104935308,LOC104932967 coding upstream 201099 4473257 ~ 4474025 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding upstream 222361 4494519 ~ 4494887 (-)
G163326 NA non-coding downstream 31862 4233868 ~ 4235519 (-)
G163333 NA non-coding downstream 48881 4218122 ~ 4218500 (-)
G163332 NA non-coding downstream 54350 4208478 ~ 4213031 (-)
G163312 NA non-coding downstream 65664 4165496 ~ 4201717 (-)
G163297 NA non-coding downstream 65781 4145799 ~ 4201600 (-)
LOC120544588 NA non-coding upstream 13318 4285476 ~ 4285761 (-)
G163317 NA non-coding upstream 69402 4341560 ~ 4420569 (-)
G163328 NA non-coding upstream 73415 4345573 ~ 4411771 (-)
G163377 NA non-coding upstream 287346 4559504 ~ 4580903 (-)
G163390 LOC104935308,LOC104932967 non-coding upstream 291871 4564029 ~ 4583587 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 109757 4147863 ~ 4157624 (-)
G163259 NA other downstream 393266 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 1034099 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 1069133 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 1171907 3037923 ~ 3095474 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 9615 4281773 ~ 4821872 (-)
G163334 NA other upstream 30408 4302566 ~ 4304048 (-)
G163315 NA other upstream 62685 4334843 ~ 4820499 (-)
taf9 NA other upstream 169831 4441989 ~ 4443562 (-)
LOC120544568 LOC104932967,LOC104935308 other upstream 218847 4491005 ~ 4493351 (-)

Expression


Co-expression Network