Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-cac |
| gene name | NA |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 3409806 ~ 3409878 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| unassigned_transcript_893 | True | 73 | tRNA | 0.56 | 1 | 3409806 | 3409878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnav-aac_3 | NA | coding | downstream | 3704 | 3406030 ~ 3406102 (-) |
| trnad-guc_8 | NA | coding | downstream | 4548 | 3405187 ~ 3405258 (-) |
| LOC120575705 | NA | coding | downstream | 55253 | 3347620 ~ 3354553 (-) |
| ncbp3 | LOC102780188 | coding | downstream | 323589 | 3070070 ~ 3086217 (-) |
| LOC120543768 | NA | coding | downstream | 472054 | 2924482 ~ 2937752 (-) |
| trnav-cac_1 | NA | coding | upstream | 6488 | 3416366 ~ 3416438 (-) |
| trnai-aau_27 | NA | coding | upstream | 14735 | 3424613 ~ 3424685 (-) |
| trnav-aac_4 | NA | coding | upstream | 22628 | 3432506 ~ 3432578 (-) |
| trnaa-agc_20 | NA | coding | upstream | 33968 | 3443846 ~ 3443918 (-) |
| LOC120543677 | NA | coding | upstream | 180433 | 3590311 ~ 3592122 (-) |
| LOC120543535 | NA | non-coding | downstream | 44634 | 3363026 ~ 3365172 (-) |
| G162913 | NA | non-coding | downstream | 62898 | 3344675 ~ 3346908 (-) |
| G162981 | NA | non-coding | downstream | 70696 | 3336511 ~ 3339110 (-) |
| G162970 | NA | non-coding | downstream | 101854 | 3289059 ~ 3307952 (-) |
| G162967 | NA | non-coding | downstream | 124128 | 3283343 ~ 3285678 (-) |
| trnav-aac_5 | NA | non-coding | upstream | 42891 | 3452769 ~ 3452841 (-) |
| trnav-cac_2 | NA | non-coding | upstream | 44646 | 3454524 ~ 3454596 (-) |
| trnav-aac_6 | NA | non-coding | upstream | 49045 | 3458923 ~ 3458995 (-) |
| trnav-cac_3 | NA | non-coding | upstream | 49664 | 3459542 ~ 3459614 (-) |
| trnav-cac_4 | NA | non-coding | upstream | 50777 | 3460655 ~ 3460727 (-) |
| LOC120544249 | alg8 | other | downstream | 176524 | 3178767 ~ 3233282 (-) |
| LOC120544311 | LOC101470105,LOC107380983,LOC102214284 | other | downstream | 211558 | 3185970 ~ 3198248 (-) |
| LOC120543772 | NA | other | downstream | 314332 | 3037923 ~ 3095474 (-) |
| G162910 | NA | other | downstream | 580212 | 2827089 ~ 2829594 (-) |
| LOC120543939 | NA | other | downstream | 758403 | 2342150 ~ 2651403 (-) |
| G163259 | NA | other | upstream | 460447 | 3870325 ~ 3874115 (-) |
| rnasekb | rnasek,LOC107554319,LOC101475670 | other | upstream | 737985 | 4147863 ~ 4157624 (-) |
| LOC120544555 | siah2,LOC101471392,LOC102786130 | other | upstream | 871895 | 4281773 ~ 4821872 (-) |
| G163334 | NA | other | upstream | 892688 | 4302566 ~ 4304048 (-) |
| G163315 | NA | other | upstream | 924965 | 4334843 ~ 4820499 (-) |
