trnag-gcc_5


Basic Information

Item Value
gene id trnag-gcc_5
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4766508 ~ 4766578 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_929
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGaggcccgggttcgattcccggcCAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_929 True 71 tRNA 0.62 1 4766508 4766578

Neighbor

gene id symbol gene type direction distance location
LOC120544564 NA coding downstream 16113 4717020 ~ 4750395 (-)
LOC120544566 si:ch1073-153i20.5,LOC103462478,LOC102204254,LOC107386469,LOC101485372,LOC103381127,LOC103379246 coding downstream 138126 4627154 ~ 4628382 (-)
LOC120544576 LOC107723971,LOC107375340,LOC107690788,LOC107579420 coding downstream 161865 4604055 ~ 4604643 (-)
LOC120544567 si:ch1073-153i20.5,si:ch73-368j24.13,LOC103462478,LOC107386469,LOC102204254,LOC103381127 coding downstream 163513 4601695 ~ 4602995 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding downstream 271621 4494519 ~ 4494887 (-)
LOC120544239 LOC104943257 coding upstream 213841 4980419 ~ 4981366 (-)
LOC120544283 NA coding upstream 286777 5053355 ~ 5054317 (-)
LOC120544284 NA coding upstream 295457 5062035 ~ 5062985 (-)
LOC120544286 NA coding upstream 307178 5073756 ~ 5074691 (-)
LOC120544289 NA coding upstream 315932 5082510 ~ 5083454 (-)
trnag-gcc_4 NA non-coding downstream 3806 4762632 ~ 4762702 (-)
trnag-gcc_3 NA non-coding downstream 4376 4762062 ~ 4762132 (-)
trnag-gcc_2 NA non-coding downstream 5012 4761426 ~ 4761496 (-)
trnad-guc_10 NA non-coding downstream 7999 4758438 ~ 4758509 (-)
trnad-guc_9 NA non-coding downstream 9776 4756661 ~ 4756732 (-)
trnag-gcc_6 NA non-coding upstream 3458 4770036 ~ 4770106 (-)
trnag-gcc_7 NA non-coding upstream 9942 4776520 ~ 4776590 (-)
trnag-gcc_8 NA non-coding upstream 16380 4782958 ~ 4783027 (-)
trnad-guc_11 NA non-coding upstream 17453 4784031 ~ 4784102 (-)
trnag-gcc_9 NA non-coding upstream 19608 4786186 ~ 4786256 (-)
LOC120544563 NA other downstream 16078 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 71892 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 273157 4491005 ~ 4493351 (-)
taf9 NA other downstream 322946 4441989 ~ 4443562 (-)
G163334 NA other downstream 462460 4302566 ~ 4304048 (-)
G163767 NA other upstream 2490560 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2564336 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 3094875 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3580250 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3601917 8368495 ~ 8380575 (-)

Expression


Co-expression Network