trnag-gcc_10


Basic Information

Item Value
gene id trnag-gcc_10
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4792659 ~ 4792729 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_936
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGaggcccgggttcgattcccggcCAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_936 True 71 tRNA 0.62 1 4792659 4792729

Neighbor

gene id symbol gene type direction distance location
LOC120544564 NA coding downstream 42264 4717020 ~ 4750395 (-)
LOC120544566 si:ch1073-153i20.5,LOC103462478,LOC102204254,LOC107386469,LOC101485372,LOC103381127,LOC103379246 coding downstream 164277 4627154 ~ 4628382 (-)
LOC120544576 LOC107723971,LOC107375340,LOC107690788,LOC107579420 coding downstream 188016 4604055 ~ 4604643 (-)
LOC120544567 si:ch1073-153i20.5,si:ch73-368j24.13,LOC103462478,LOC107386469,LOC102204254,LOC103381127 coding downstream 189664 4601695 ~ 4602995 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding downstream 297772 4494519 ~ 4494887 (-)
LOC120544239 LOC104943257 coding upstream 187690 4980419 ~ 4981366 (-)
LOC120544283 NA coding upstream 260626 5053355 ~ 5054317 (-)
LOC120544284 NA coding upstream 269306 5062035 ~ 5062985 (-)
LOC120544286 NA coding upstream 281027 5073756 ~ 5074691 (-)
LOC120544289 NA coding upstream 289781 5082510 ~ 5083454 (-)
trnad-guc_12 NA non-coding downstream 5330 4787258 ~ 4787329 (-)
trnag-gcc_9 NA non-coding downstream 6403 4786186 ~ 4786256 (-)
trnad-guc_11 NA non-coding downstream 8557 4784031 ~ 4784102 (-)
trnag-gcc_8 NA non-coding downstream 9632 4782958 ~ 4783027 (-)
trnag-gcc_7 NA non-coding downstream 16069 4776520 ~ 4776590 (-)
trnad-guc_13 NA non-coding upstream 7018 4799747 ~ 4799818 (-)
trnag-gcc_11 NA non-coding upstream 8122 4800851 ~ 4800921 (-)
G163422 NA non-coding upstream 9980 4802709 ~ 4815755 (-)
trnad-guc_14 NA non-coding upstream 10162 4802891 ~ 4802962 (-)
trnad-guc_15 NA non-coding upstream 10841 4803570 ~ 4803641 (-)
LOC120544563 NA other downstream 42229 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 98043 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 299308 4491005 ~ 4493351 (-)
taf9 NA other downstream 349097 4441989 ~ 4443562 (-)
G163334 NA other downstream 488611 4302566 ~ 4304048 (-)
G163767 NA other upstream 2464409 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2538185 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 3068724 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3554099 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3575766 8368495 ~ 8380575 (-)

Expression


Co-expression Network