G171674



Basic Information


Item Value
gene id G171674
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 479794 ~ 480151 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU232694
tctcgagacactttacagatagagtaggtctagaccacactctataatttacaaagccccaacaattccaacaattccagtaattccctcaagagcaagcagtgcgacagtggcgaggaaaaactccctcttgggaagaaacctcggacagacccaggctcttggtaggcggtgtctgacgagccggttgggggtgtgatgaacagtggcgatagtagtcacattaataatggaacagtgactggatgtagcgggaagctgcagggttcagcaggacgcagcatgacattgcagggcattgctgagctcagcagggagtgcagcaggaccacggcgacagctgcaaccagggtcttgg

Function


GO:

id name namespace
GO:0004953 icosanoid receptor activity molecular_function
GO:0004954 prostanoid receptor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU232694 True 358 lncRNA 0.53 1 479794 480151

Neighbor


gene id symbol gene type direction distance location
LOC120545827 NA coding downstream 20518 458084 ~ 459276 (-)
mapkap1 mapkap1,LOC102781088 coding downstream 137417 302496 ~ 342377 (-)
LOC120546082 LOC103362445,LOC102082667,LOC102197263,LOC102301125,LOC101469328 coding downstream 295011 144208 ~ 184783 (-)
nek6 LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322 coding upstream 53228 533379 ~ 564782 (-)
LOC120545215 NA coding upstream 115742 595893 ~ 621737 (-)
crb2a NA coding upstream 144809 624960 ~ 659720 (-)
slc12a2 NA coding upstream 272261 752412 ~ 846977 (-)
slc27a6 slc27a6 coding upstream 403718 883869 ~ 951206 (-)
G171636 NA non-coding downstream 184509 295066 ~ 295285 (-)
LOC120546083 samd3,LOC101476819 non-coding downstream 407996 71010 ~ 71798 (-)
G171680 NA non-coding upstream 38689 518840 ~ 519070 (-)
G171718 NA non-coding upstream 86868 567019 ~ 567342 (-)
G171719 NA non-coding upstream 90150 570301 ~ 570904 (-)
G171728 NA non-coding upstream 119395 599546 ~ 600048 (-)
LOC120545599 fbxw2 non-coding upstream 192321 672472 ~ 745412 (-)
prrc1 prrc1 other upstream 514286 994437 ~ 1008188 (-)
megf10 megf10 other upstream 560647 1040798 ~ 1146587 (-)
G171868 NA other upstream 690052 1170203 ~ 1170789 (-)
G172032 NA other upstream 1116365 1596516 ~ 1602156 (-)
G172311 NA other upstream 2504671 2984822 ~ 2985260 (-)

Expression



Co-expression Network