Gene
RNA
| Item | Value |
|---|---|
| gene id | G171893 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 1228228 ~ 1283125 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko03022 | Basal transcription factors |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU232986 | True | 880 | lncRNA | 0.43 | 2 | 1228228 | 1283125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120544936 | LOC107748254 | coding | downstream | 44325 | 1174528 ~ 1183903 (-) |
| LOC120545116 | LOC103364476 | coding | downstream | 194299 | 1012144 ~ 1033929 (-) |
| lmnb1 | lmnb1 | coding | downstream | 240347 | 966999 ~ 987881 (-) |
| slc27a6 | slc27a6 | coding | downstream | 277022 | 883869 ~ 951206 (-) |
| slc12a2 | NA | coding | downstream | 381251 | 752412 ~ 846977 (-) |
| syk | syk | coding | upstream | 109639 | 1392764 ~ 1423159 (-) |
| reep5 | reep5,LOC105917055,LOC107098485,LOC103152299 | coding | upstream | 223429 | 1506554 ~ 1522474 (-) |
| nrg1 | NA | coding | upstream | 372223 | 1655348 ~ 1715953 (-) |
| slc38a9 | slc38a9,LOC103372190,LOC103372967 | coding | upstream | 463458 | 1746583 ~ 1794896 (-) |
| purg | purg,LOC101478350 | coding | upstream | 519873 | 1802998 ~ 1813828 (-) |
| LOC120545753 | NA | non-coding | downstream | 20875 | 1204231 ~ 1207353 (-) |
| G171886 | NA | non-coding | downstream | 34316 | 1184173 ~ 1193912 (-) |
| G171848 | NA | non-coding | downstream | 189418 | 1038339 ~ 1038810 (-) |
| G171846 | NA | non-coding | downstream | 190702 | 1036831 ~ 1037526 (-) |
| G171839 | NA | non-coding | downstream | 218801 | 1008831 ~ 1009427 (-) |
| G171949 | NA | non-coding | upstream | 50698 | 1333823 ~ 1371734 (-) |
| G171960 | NA | non-coding | upstream | 86121 | 1369246 ~ 1373758 (-) |
| G171959 | NA | non-coding | upstream | 95117 | 1378242 ~ 1457614 (-) |
| G171986 | NA | non-coding | upstream | 210106 | 1493231 ~ 1494317 (-) |
| G171987 | NA | non-coding | upstream | 211710 | 1494835 ~ 1496527 (-) |
| G171868 | NA | other | downstream | 57439 | 1170203 ~ 1170789 (-) |
| megf10 | megf10 | other | downstream | 81641 | 1040798 ~ 1146587 (-) |
| prrc1 | prrc1 | other | downstream | 220040 | 994437 ~ 1008188 (-) |
| G172032 | NA | other | upstream | 313391 | 1596516 ~ 1602156 (-) |
| G172311 | NA | other | upstream | 1701697 | 2984822 ~ 2985260 (-) |
| G172620 | NA | other | upstream | 2603463 | 3886588 ~ 3943831 (-) |
| cdk9 | cdk9 | other | upstream | 2856041 | 4139166 ~ 4147813 (-) |
| dpm2 | dpm2 | other | upstream | 3269746 | 4552871 ~ 4559768 (-) |
