G172231


Basic Information

Item Value
gene id G172231
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 2329685 ~ 2329970 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU233382
tgacagtagctaggtaaggactactagccagtcagaagcagagtatgagggcatgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtagctaggtaaggactactagccagtcagaagcagagtatgagggcatgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcatgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU233382 True 286 lncRNA 0.52 1 2329685 2329970

Neighbor

gene id symbol gene type direction distance location
dcp2 dcp2 coding downstream 49874 2253897 ~ 2279811 (-)
LOC120545833 NA coding downstream 76730 2179488 ~ 2252955 (-)
hmgcs1 hmgcs1,LOC107394923,LOC105917111,LOC102790295 coding downstream 170634 2145367 ~ 2159051 (-)
tln1 tln1,LOC100711808 coding downstream 256579 1948903 ~ 2073106 (-)
tpm2 tpm2,LOC106571564,LOC107394912,LOC103389160,LOC108276716,LOC108427282,LOC107737084,LOC108242564,LOC103044350,LOC107670037,LOC107102752,LOC102218310,LOC107572193 coding downstream 386175 1887537 ~ 1943510 (-)
dcc dcc,LOC102787302 coding upstream 139205 2469175 ~ 2807464 (-)
mbd2 mbd2,LOC100708236,LOC103373628 coding upstream 838656 3168626 ~ 3246890 (-)
LOC120545955 NA coding upstream 947579 3277549 ~ 3281952 (-)
june LOC100707786,LOC102781123,LOC101463670,LOC102205300,LOC105936581 coding upstream 1133932 3463902 ~ 3475242 (-)
LOC120544885 NA coding upstream 1153755 3483725 ~ 3505303 (-)
G172180 NA non-coding downstream 232521 2090423 ~ 2097164 (-)
G172151 NA non-coding downstream 239706 2089713 ~ 2089979 (-)
G172150 NA non-coding downstream 246443 2082808 ~ 2083242 (-)
G172111 NA non-coding downstream 382780 1946644 ~ 1946905 (-)
G172053 NA non-coding downstream 588255 1741024 ~ 1741430 (-)
G172235 NA non-coding upstream 11656 2341626 ~ 2342031 (-)
LOC120544955 NA non-coding upstream 75805 2405775 ~ 2406868 (-)
G172283 NA non-coding upstream 319488 2649458 ~ 2729174 (-)
LOC120545025 NA non-coding upstream 479004 2808974 ~ 2809530 (-)
G172295 NA non-coding upstream 542886 2872856 ~ 2873112 (-)
G172032 NA other downstream 727529 1596516 ~ 1602156 (-)
G171868 NA other downstream 1158896 1170203 ~ 1170789 (-)
megf10 megf10 other downstream 1183098 1040798 ~ 1146587 (-)
prrc1 prrc1 other downstream 1321497 994437 ~ 1008188 (-)
G172311 NA other upstream 654852 2984822 ~ 2985260 (-)
G172620 NA other upstream 1556618 3886588 ~ 3943831 (-)
cdk9 cdk9 other upstream 1809196 4139166 ~ 4147813 (-)
dpm2 dpm2 other upstream 2222901 4552871 ~ 4559768 (-)
G172920 NA other upstream 2440847 4770817 ~ 4771303 (-)

Expression


Co-expression Network