Gene
RNA
| Item | Value |
|---|---|
| gene id | G172313 |
| gene name | LOC104947167 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 2987937 ~ 2988216 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104947167, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU233475 | True | 280 | lncRNA | 0.52 | 1 | 2987937 | 2988216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dcc | dcc,LOC102787302 | coding | downstream | 180473 | 2469175 ~ 2807464 (-) |
| dcp2 | dcp2 | coding | downstream | 708126 | 2253897 ~ 2279811 (-) |
| LOC120545833 | NA | coding | downstream | 734982 | 2179488 ~ 2252955 (-) |
| hmgcs1 | hmgcs1,LOC107394923,LOC105917111,LOC102790295 | coding | downstream | 828886 | 2145367 ~ 2159051 (-) |
| tln1 | tln1,LOC100711808 | coding | downstream | 914831 | 1948903 ~ 2073106 (-) |
| mbd2 | mbd2,LOC100708236,LOC103373628 | coding | upstream | 180410 | 3168626 ~ 3246890 (-) |
| LOC120545955 | NA | coding | upstream | 289333 | 3277549 ~ 3281952 (-) |
| june | LOC100707786,LOC102781123,LOC101463670,LOC102205300,LOC105936581 | coding | upstream | 475686 | 3463902 ~ 3475242 (-) |
| LOC120544885 | NA | coding | upstream | 495509 | 3483725 ~ 3505303 (-) |
| LOC120546063 | NA | coding | upstream | 564222 | 3552438 ~ 3582804 (-) |
| G172312 | NA | non-coding | downstream | 331 | 2987209 ~ 2987606 (-) |
| G172295 | NA | non-coding | downstream | 114825 | 2872856 ~ 2873112 (-) |
| LOC120545025 | NA | non-coding | downstream | 178407 | 2808974 ~ 2809530 (-) |
| G172283 | NA | non-coding | downstream | 258763 | 2649458 ~ 2729174 (-) |
| LOC120544955 | NA | non-coding | downstream | 581069 | 2405775 ~ 2406868 (-) |
| G172342 | NA | non-coding | upstream | 163845 | 3152061 ~ 3152756 (-) |
| LOC120545949 | NA | non-coding | upstream | 171055 | 3159271 ~ 3167356 (-) |
| G172432 | NA | non-coding | upstream | 337550 | 3325766 ~ 3327234 (-) |
| G172439 | NA | non-coding | upstream | 369909 | 3358125 ~ 3358520 (-) |
| G172443 | NA | non-coding | upstream | 374531 | 3362747 ~ 3363219 (-) |
| G172311 | NA | other | downstream | 2677 | 2984822 ~ 2985260 (-) |
| G172032 | NA | other | downstream | 1385781 | 1596516 ~ 1602156 (-) |
| G171868 | NA | other | downstream | 1817148 | 1170203 ~ 1170789 (-) |
| megf10 | megf10 | other | downstream | 1841350 | 1040798 ~ 1146587 (-) |
| prrc1 | prrc1 | other | downstream | 1979749 | 994437 ~ 1008188 (-) |
| G172620 | NA | other | upstream | 898372 | 3886588 ~ 3943831 (-) |
| cdk9 | cdk9 | other | upstream | 1150950 | 4139166 ~ 4147813 (-) |
| dpm2 | dpm2 | other | upstream | 1564655 | 4552871 ~ 4559768 (-) |
| G172920 | NA | other | upstream | 1782601 | 4770817 ~ 4771303 (-) |
| odf2a | LOC103374699 | other | upstream | 1858063 | 4846279 ~ 4897357 (-) |
