dpm2 (dpm2)


Basic Information

Item Value
gene id dpm2
gene name dpm2
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 4552871 ~ 4559768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU234080
CGGATTTCTCAACAGGAGGAAGAACAGCAGGAAGCGTCAGCAAACAGAAATGgCTACAGGAGTGGATCAAGCAGTTGGCATGAGTCTTGTTGTCTTCAGCCTCCTGTTGTTCACCTACTACTCAGTCTGGGTCATCATCCTGCCTTTCGTGGACAGTGATCACGTACTGCACAAGTATTTTCTTCCTCGGGAATACTCAGTCATTCTGCCCGGCATTGCAGCAGTAATACTGCTCCTCTGTATAGGGGCCTTCACTGCAGTTATCATGTGGAAGAATCGCAAGCCCAAAAAAGTGGACTAATCTCAGGATGTTGGACTGCTGTGGATTTTGGGAAAATAGCCTTGATGCTAAACCGTCTCTAGTGGCCCTGACGTTAATGCTCACAGAATGAGAATTGTACAAAAGAAAGTTTCCtgatatttattctatattttggtttatttttccAGTTCAGTTCAAGTTGATAATTAGAAATCAGCTACTGTGTTTTAAAGCTGCTATGTGTCGAATTTGAAAACCTTCGACTTCAGTGAGTGGTAGATTATAAAAAGACACTGAGAATGAatattgtgaaaacaaaatatagACTGCAACAATGAGAATAACTTAAAGatcccattaaaaaaaaaaaaaaaaaatgacacaaaattacttttgaatgtGTCCAAAGCTTATGAGATTGCTCAGTGAATCACTGTTACTATGACTCGACTGTAGTGTTCAGATCAGTCACAATGTTCTCTCCTTTAGTAGGCAGTACACAGTGTTAACAGGAATTCATTTAGCTGAAGGGTTTATGTCAATGTCATATTTAATAGACCATTAGGATTTCATTGGGATCGGGTAGATAATGCCTCATATAAACAAACTACTGCAAAAGGGAGAGCTTATGTCCGTATCTTGAATTTCACAGGCGTCTCAATAGTCTGATGTTACTTTTACCTAATCAGACCAAATTTTTGAAAACCCTGATTATAAGAAGAAAGTCCCCTTGACAGTGAACATTAAGGCTTCAAACAACCCATAATGCATCACTCTCTGTAGGAGCCGGTGTTACACCAGTACTGAAACTAAAACAATCTGATGCAAATACATAAATGTCTTGTCctcaatatatataatatgaccCTCCCTATTTAAAACGTACTTTCCAGAATTGATTATGTTTGGGCTAATATGACAATTGACAGTAACATGGCAGGATGGAAGGAGGTGGAATATATGTCACTGtgtaaagaaatgacaaaattcCGACTTTATTGAAAGCAGCATGGGTCTTAAATTCTGTAAATACTGTGACAatgtgtcaatttttttttaagtatgaaTGATgttaattgtaatttttttttttggatgcaAACCAGAATTTTATTTGATACAAACCAATTGGTATATAATAAAGGCTGGTAATGGGGCCAGTGGTCCATtttctttgataaataaattgGTGATGCTGGgaaacagtttttttatttattacaaatGCTTTGTTTATCTTGATAATTGCAGATCTGCAGTACAGTAGATGCTGTAGTTCTAATAGCAACACTCATTGTGATAGTAACACTAGCAAATAATACATatgttagtagtagtagtagtagtaggctTATAAGTAACTAGTAGCCGTAGACTAGTTTTACTGATGGGAGTAGTGGCTTATCCAAGTACTGTATGTTTCCTCCTGACTGCTGCCCTCTGTGGAAAATAACTACTGAATaactaccaagagcctgggtctgtcccaggtttcttcccaagagggagtttttcctcgccactgtcgcactgcttgctcttgagggaattactgtaattgctggaattgttggggct
>XM_039780759.1
ACaggctactgtacatgtgttttgCAGGTCAACCAGTAGGGGGCAGCAGAGACCCTCCGATCCATCTTGTCAGCCGGATTTCTCAACAGGAGGAAGAACAGCAGGAAGCGTCAGCAAACAGAAATGgCTACAGGAGTGGATCAAGCAGTTGGCATGAGTCTTGTTGTCTTCAGCCTCCTGTTGTTCACCTACTACTCAGTCTGGGTCATCATCCTGCCTTTCGTGGACAGTGATCACGTACTGCACAAGTATTTTCTTCCTCGGGAATACTCAGTCATTCTGCCCGGCATTGCAGCAGTAATACTGCTCCTCTGTATAGGGGCCTTCACTGCAGTTATCATGTGGAAGAATCGCAAGCCCAAAAAAGTGGACTAATCTCAGGATGTTGGACTGCTGTGGATTTTGGGAAAATAGCCTTGATGCTAAACCGTCTCTAGTGGCCCTGACGTTAATGCTCACAGAATGAGAATTGTACAAAAGAAAGTTTCCtgatatttattctatattttggtttatttttccAGTTCAGTTCAAGTTGATAATTAGAAATCAGCTACTGTGTTTTAAAGCTGCTATGTGTCGAATTTGAAAACCTTCGACTTCAGTGAGTGGTAGATTATAAAAAGACACTGAGAATGAatattgtgaaaacaaaatatagACTGCAACAATGAGAATAACTTAAAGatcccattaaaaaaaaaaaaaaaaaatgacacaaaattacttttgaatgtGTCCAAAGCTTATGAGATTGCTCAGTGAATCACTGTTACTATGACTCGACTGTAGTGTTCAGATCAGTCACAATGTTCTCTCCTTTAGTAGGCAGTACACAGTGTTAACAGGAATTCATTTAGCTGAAGGGTTTATGTCAATGTCATATTTAATAGACCATTAGGATTTCATTGGGATCGGGTAGATAATGCCTCATATAAACAAACTACTGCAAAAGGGAGAGCTTATGTCCGTATCTTGAATTTCACAGGCGTCTCAATAGTCTGATGTTACTTTTACCTAATCAGACCAAATTTTTGAAAACCCTGATTATAAGAAGAAAGTCCCCTTGACAGTGAACATTAAGGCTTCAAACAACCCATAATGCATCACTCTCTGTAGGAGCCGGTGTTACACCAGTACTGAAACTAAAACAATCTGATGCAAATACATAAATGTCTTGTCctcaatatatataatatgaccCTCCCTATTTAAAACGTACTTTCCAGAATTGATTATGTTTGGGCTAATATGACAATTGACAGTAACATGGCAGGATGGAAGGAGGTGGAATATATGTCACTGtgtaaagaaatgacaaaattcCGACTTTATTGAAAGCAGCATGGGTCTTAAATTCTGTAAATACTGTGACAatgtgtcaatttttttttaagtatgaaTGATgttaattgtaatttttttttttggatgcaAACCAGAATTTTATTTGATACAAACCAATTGGTATATAATAAAGGCTGGTAATGGGGCCAGTGGTCCATtttctttgataaataaattgGTGATGCTGGgaaa

Function

symbol description
dpm2 Predicted to enable enzyme regulator activity. Acts upstream of or within muscle structure development. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of endoplasmic reticulum membrane. Predicted to be part of dolichol-phosphate-mannose synthase complex. Is expressed in brain; cloaca; pronephric duct; solid lens vesicle; and vertical myoseptum. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Iu. Orthologous to human DPM2 (dolichyl-phosphate mannosyltransferase subunit 2, regulatory).

NR:

description
dolichol phosphate-mannose biosynthesis regulatory protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234080 True 1840 lncRNA 0.38 4 4552871 4559694
XM_039780759.1 False 1539 mRNA 0.38 4 4553246 4559768

Neighbor

gene id symbol gene type direction distance location
pip5kl1 pip5kl1 coding downstream 10081 4511110 ~ 4542790 (-)
LOC120546073 NA coding downstream 81713 4465940 ~ 4471158 (-)
tbc1d13 tbc1d13,LOC102788004 coding downstream 195617 4340194 ~ 4357254 (-)
thnsl2 thnsl2,LOC102788563 coding downstream 220716 4307976 ~ 4332155 (-)
dqx1 dqx1 coding downstream 246387 4270984 ~ 4306484 (-)
fam102ab fam102a,LOC102785250,LOC100701617,LOC101484077 coding upstream 3589 4563357 ~ 4599232 (-)
naif1 naif1 coding upstream 47956 4607724 ~ 4612536 (-)
pkn3 LOC103374969 coding upstream 118138 4677906 ~ 4732313 (-)
sptan1 sptan1 coding upstream 211981 4771749 ~ 4832171 (-)
scai scai coding upstream 349815 4909583 ~ 4997957 (-)
G172787 NA non-coding downstream 43788 4508239 ~ 4509083 (-)
G172777 NA non-coding downstream 78010 4474239 ~ 4474861 (-)
G172768 NA non-coding downstream 87036 4464827 ~ 4465835 (-)
G172755 NA non-coding downstream 150847 4401811 ~ 4402024 (-)
G172743 NA non-coding downstream 212973 4336089 ~ 4339898 (-)
G172914 NA non-coding upstream 193398 4753166 ~ 4753459 (-)
G172915 NA non-coding upstream 194685 4754453 ~ 4754782 (-)
G172916 NA non-coding upstream 196928 4756696 ~ 4757095 (-)
G172917 NA non-coding upstream 201946 4761714 ~ 4762109 (-)
G172929 NA non-coding upstream 346120 4905888 ~ 4908580 (-)
cdk9 cdk9 other downstream 405058 4139166 ~ 4147813 (-)
G172620 NA other downstream 609040 3886588 ~ 3943831 (-)
G172311 NA other downstream 1567611 2984822 ~ 2985260 (-)
G172032 NA other downstream 2950715 1596516 ~ 1602156 (-)
G171868 NA other downstream 3382082 1170203 ~ 1170789 (-)
G172920 NA other upstream 211049 4770817 ~ 4771303 (-)
odf2a LOC103374699 other upstream 286511 4846279 ~ 4897357 (-)
LOC120545230 NA other upstream 836865 5396633 ~ 5400678 (-)
LOC120544971 NA other upstream 1808539 6368307 ~ 6374489 (-)
LOC120546140 NA other upstream 2261044 6820812 ~ 6820866 (-)

Expression


Co-expression Network