G173104


Basic Information

Item Value
gene id G173104
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 5434217 ~ 5442206 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU234418
CGCTTTGCTGACCAAATGACTTATGTTCCTATAATACACTGCCTAATCATTACAGCAAGCTGCCTAGACTTAACGAGCTAAAAGTATGCTGCACGAGAACAGAACCAAGGCTGCACACAGGTGGCCTGCATCGTGCAAATGAGGAAATGTTCCTCTGTGGAATGCAGTAAGCAAGGACGGAGGACACCAGACCTTGCTCAGTCACAATCCATCAAAAGCAACAGCCCACCTTGTAGAGACAGATGTTCGTGTGTGATATGTAACTGCCCTTGTGAAACTTCAATAAAAGACaggcaaaagaggaagagagtcagAGCTCACTGGTGAGAGACAGACTGCGGAGTCTGCCTACGGAGTGATGCTCTCCTCCTATAGGAGCCTATTGTGTGAACTTTAACTTGTGTTTGTGAAGTTATTACTATCTATTGCAGTGAAGAAGTCCTCACCTGGGAGTGCACCTTGGAAGCACGACAATTGGGGGACTCGTCCGGgatgagaggaaaagaggattCTTCAAATTGATTGACAAAGGTTCGGTCCAAGGGTGAAAAGTCGCGTTGAACATCTGGCGCCATAAATAAGGTGACCGCAGCACACCCAGACGCAGAAACCAAAACTCCTCCAGACGCTGAGTGGGTGCTCCTGAAAGCAATTAAGAGGAAGTGGTCTGAACCTCGCTGGCAGGGGCCCTTCAGAGTGACGGCGAGAACATCCCACGCAGTGCAGCTCgagggaaaaggtaaacagtggtACCACTGGAGCCAGTGTGCTGCTGCCCAGGAGCCAGGCCGCTCCACCAAGGAAGTAGCCAGAGATCTGGCTGCCAGCG

Function

GO: NA

KEGG:

id description
ko00030 Pentose phosphate pathway
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
TU234418 True 829 lncRNA 0.50 2 5434217 5442206

Neighbor

gene id symbol gene type direction distance location
pam pam coding downstream 120784 5177157 ~ 5313433 (-)
derl2 derl2 coding downstream 308780 5100579 ~ 5125437 (-)
LOC120545498 smarcb1b,LOC104928041,LOC103358289,LOC106535110,LOC100704669,LOC101070741 coding downstream 334153 5043560 ~ 5100064 (-)
ppp6c ppp6c,LOC102313764,LOC102783418,LOC100701794,LOC104928043,LOC103372694,LOC101475652,LOC108228845 coding downstream 422907 5002320 ~ 5011310 (-)
scai scai coding downstream 436260 4909583 ~ 4997957 (-)
LOC120545938 LOC101480421,LOC106530361 coding upstream 90179 5532385 ~ 5557976 (-)
LOC120545046 LOC101480421 coding upstream 123833 5566039 ~ 5573779 (-)
ccni ccni,LOC106529109,LOC106925549,LOC106963610 coding upstream 416767 5858973 ~ 5885428 (-)
LOC120545631 NA coding upstream 458246 5900452 ~ 5906700 (-)
LOC120545633 NA coding upstream 465153 5907359 ~ 5919472 (-)
G173093 NA non-coding downstream 53480 5378877 ~ 5380737 (-)
G173055 NA non-coding downstream 71991 5361595 ~ 5362226 (-)
G173050 NA non-coding downstream 80154 5353702 ~ 5354063 (-)
G172982 NA non-coding downstream 299604 5134330 ~ 5134613 (-)
G172981 NA non-coding downstream 304094 5129819 ~ 5130123 (-)
G173112 NA non-coding upstream 20445 5462651 ~ 5465246 (-)
LOC120545002 NA non-coding upstream 52024 5494230 ~ 5498387 (-)
G173131 NA non-coding upstream 81317 5523523 ~ 5523760 (-)
G173136 NA non-coding upstream 143890 5586096 ~ 5586533 (-)
G173165 NA non-coding upstream 239231 5681437 ~ 5681934 (-)
LOC120545230 NA other downstream 33539 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 536860 4846279 ~ 4897357 (-)
G172920 NA other downstream 662914 4770817 ~ 4771303 (-)
dpm2 dpm2 other downstream 874449 4552871 ~ 4559768 (-)
cdk9 cdk9 other downstream 1286404 4139166 ~ 4147813 (-)
LOC120544971 NA other upstream 926101 6368307 ~ 6374489 (-)
LOC120546140 NA other upstream 1378606 6820812 ~ 6820866 (-)
G173470 LOC103389048,LOC105418623 other upstream 1710664 7152870 ~ 7160087 (-)
G173727 LOC107687935 other upstream 2915517 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 3183276 8625482 ~ 8634067 (-)

Expression


Co-expression Network