LOC120544971


Basic Information

Item Value
gene id LOC120544971
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 6368307 ~ 6374489 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU234726
AAACAACTCAAGCGCCGTGGAGCATGTCAAAGAGCATGTTCAACCGCAACACCGTTTCGCTACGGTTTCTTGATTGGACGACATGTTTCCTTGCAACGGTGTTTAACGGCTTTgagttatgttttctctcgtttggtgctTGCGTCCCAGGTGACACACAATCAGCAAaaacgtgtctgtaaactcgtggtaataatAAGGCACAGCCCTTGCGCACATCGGGGTGTTCAACGCACGCccgtttcagttaaaaaaaacaacaacagcgtgttgctacgttttgtc
>XM_039778878.1
CTCAAGCGCCGTGGAGCATGTCAAAGAGCATGTTCAACCGCAACACCGTTTCGCTACGGTTTCTTGATTGGACGACATGTTTCCTTGCAACGGTGTTTAACGGCTTTgagttatgttttctctcgtttggtgctTGCGTCCCAGGTGACACACAATCAGCAAaaacgtgtctgtaaactcgtggtaataatAAGGCACAGCCCTTGCGCACATCGGGGTGTTCAACGCACGCccgtttcagttaaaaaaaacaacaacagcgtgttgctacgttttgtccgggctgaacgtggccctgGTGTAGAATAAACTGCAAGACGTGTAAACGTAGCTAGTGCTGATTAATTAAGCAACAATGTCCTCAGTTGAGTATTTGAGAGAGTTTGTCAACGAGCGACTAGTtgctgctgctgaagaaatATTCAACGTTTTTGAAAAAACTATCGTTGAGTACGAGGGAGAACTCTATCGTCAGCGTAGACTGTTGGACGTCGTTTGTAAACCCGAAATAAAGTTACACAGAATAGAGCTCCCACAGCAACAGGTCtgtaaggaggaggaggttcaAGCTTACCAGCAGCTTTGTGTGCTGGAGAGGATCTCCAGTCCTGACCAAGAGGACCCAGAGTCTCTGCAGAATAAAGACAAACAGAAGGAACTGTGCACCAGTCAGGAGGGACAGCAGCATGTACTGAAGCAGGAGACTGGTACCTTTATGTTGACTCCTACTGATGAGGAAAAGGACCACAGTGAAGGTCATCCTTATGCCACTCTAAGTGCAGCAGAGAAAGAGTCTGTAGCCTACATGCCAGTTATAACCTCTGTGGTATCAGAAGCAAACAGTGACCACCAGCTCCTCTCTCACAACTCTCATGCAGCCGAAAGCCAAGATCAGAAAGGAGGCAAGCATGGAGACGCGGGATTAACTCGAAATGTAGAGCCAGAACCAAAGAAGAGACATCATAAGAGCAGAAGTCACAGTAACAATGTAAACAACCCTAACTTGTCAGTGATTCAATGTATAACTCAAGAAGGTAAAACGCCTTTCATATGTGGCGCATGTGGGAAAGACTTTAGGAGAAATTCAGGTTTACAGAAACATCTGAGAGTCCACGCAGGTGAGAAGCGATGCGTTTGCAAGATCTGCGGAAAAAGATTAAGTGATGCCTCGGTGCTAAAAAACCATATGAAaatccacacaggtgagaagcctcATTCTTGCAAGACATGTGGAAAAGATTTCAAACGTAAAGGTGGCTTGTTGAtccacatgagaatccacacagctgAGAAGCAGTATTCATGCAAAACGTGTGGGAAAGATTTCAGACGTAATGGTGACTTGTTGGTCCACATGAGAACCCATACAGGTGAAAAGCCGTATTCTTGCAAAACATGTGGAAAAGATTTTGCACGTAATGGTAGCTTGTTGAACCACATGAGAACCCATACAGGTGAAAAGCCGTATTCTTGCAAAACATGTGGAAAAGATTACACGCGTAATAGTGGCTTGTTGGTCCACATGAGAACTCATACAGGTGAAAAGCCGTATTCTTGCAAAATGTGCGGGAAAGATTTTGGAAGTAAGGATGTTTTCCGACTCCATATGAGAgtccacacaggtgagaagccatATTCTTGCAAAACATGCGGAAAAGATTTCATACGAAAATGTGACTTGTTGGTCCACATGAGAACCCATACAGGTGAAAAGCCGTATTCTTGCAAAACGTGTGGGAAAAATTTTGGACGTAAGGATGTTTTCCGAATCCatatgagaatccacacaggtgagaagccgtaTTCTTGCAAAACATGTGGAAAAGATTTCACACGTAATGGTGGCTTGTTGGTCCACATGAGAATCCATACAGGTGAAAAGCCGTATTCTTGCAAAATGTGTGGGAAAGATTTTAGAAGTAAAGATGTTTTCCGAATGCatatgagaatccacacaggtgagaagtagggctgggcgataaatcgattttatcgattaactcgaatgtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234726 False 285 lncRNA 0.47 1 6374205 6374489
XM_039778878.1 True 2012 mRNA 0.44 2 6368307 6374483

Neighbor

gene id symbol gene type direction distance location
txnl1 txnl1,LOC102796010 coding downstream 6204 6353213 ~ 6362103 (-)
nars1 nars coding downstream 20657 6328407 ~ 6347650 (-)
fech fech coding downstream 46154 6297741 ~ 6322153 (-)
LOC120545633 NA coding downstream 448835 5907359 ~ 5919472 (-)
LOC120545631 NA coding downstream 461607 5900452 ~ 5906700 (-)
LOC120545786 rab27b,LOC104935727,LOC103374166,LOC104963949,LOC108228659 coding upstream 813706 7188195 ~ 7274967 (-)
LOC120544992 NA coding upstream 921020 7295509 ~ 7297921 (-)
LOC120545581 NA coding upstream 950053 7324542 ~ 7361945 (-)
kcnv2a kcnv2,LOC102778926 coding upstream 1005955 7380444 ~ 7393965 (-)
vldlr vldlr coding upstream 1022565 7397054 ~ 7466061 (-)
G173335 NA non-coding downstream 40192 6327187 ~ 6328115 (-)
G173324 NA non-coding downstream 84107 6270430 ~ 6284200 (-)
G173336 onecut2 non-coding downstream 97930 6270079 ~ 6270377 (-)
LOC120545015 NA non-coding downstream 146600 6219459 ~ 6221707 (-)
G173290 NA non-coding downstream 150755 6216568 ~ 6217552 (-)
G173410 NA non-coding upstream 81108 6455597 ~ 6495899 (-)
G173418 NA non-coding upstream 124378 6498867 ~ 6499147 (-)
G173467 NA non-coding upstream 787235 7161724 ~ 7162217 (-)
G173526 NA non-coding upstream 919541 7294030 ~ 7294426 (-)
G173550 NA non-coding upstream 1002638 7377127 ~ 7378374 (-)
LOC120545230 NA other downstream 967629 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 1470950 4846279 ~ 4897357 (-)
G172920 NA other downstream 1597004 4770817 ~ 4771303 (-)
dpm2 dpm2 other downstream 1808539 4552871 ~ 4559768 (-)
cdk9 cdk9 other downstream 2220494 4139166 ~ 4147813 (-)
LOC120546140 NA other upstream 446323 6820812 ~ 6820866 (-)
G173470 LOC103389048,LOC105418623 other upstream 778381 7152870 ~ 7160087 (-)
G173727 LOC107687935 other upstream 1983234 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 2250993 8625482 ~ 8634067 (-)
G173900 NA other upstream 2695673 9070162 ~ 9071208 (-)

Expression


Co-expression Network