G173470 (LOC103389048,LOC105418623)


Basic Information

Item Value
gene id G173470
gene name LOC103389048,LOC105418623
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 7152870 ~ 7160087 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU234856
TTCACAGTGGAGAAgaatttatttgcattttgtaCTAAGAAACTTCTCACCAAAAGAGAgaatgtgaaaaataaatacagagagAACAGCAGAACCGGTAGAATTTGAAGTTATAAAAATAAGTCAATGAAATCTATTTCTTTTTACATATCTGTAGACACCGTCACTTTTTGTTATGAGAAAGATGAACTCAAAAAAACACCAGTGACACTGTAGTACACATTCCCAACAGCTAACATGAAAATGTCATGTGATTTATGTTCCTGTttccaaaaaaaagcaaaatacaccaacaaatgtaaacataacaGAGAAGTCAAACTGTATCTGAATATTAGCTACATGCATTTGACCGACCTTCTTCAAGCAGGGAACATGCAGAGGACTGTTAGAACAGGGCTGGGTTCAATTTACTCCCAACTCAATCAGAAGGGAGAATTTTCCTTCAAATTAAAGTATTGAACTTTTTGGCCATACTCAATATTTGAGAATAATTTCTAATTCTTTTTTACTGATTATTGAAATTTAACAACCCAGCCATGTTTATATTccgtctgtttttttcttcaaaaacaaGAGTATACAGAACATTTAACAGAGGATGGTACAGAAAACCACATAGCATATAAACTTTGCCTCTTTCTCACTTTGCATTAACACACATCTTTGAACCCAACtgtattcattatttattttacttctgAGAGCTAAAACGTCTTAGCGGTTGCACTTTTAAACATTCAAAAACTATTTAAGTAAACATTCTTTATTATTTGTGTTAATTTCGATAAAATACAATTAACAAAGATGCACATTAACGCCATTTGTGAAGTGAGATTTTCTTTTTGGTCTTCTTTACCGACACTTAAAATCTTATCCCTTAAAGCTTAACTCATGAACAGATACTGTATGTGAGAGGCACAGTAAGTTCCTCAATACAGCAGCAAGCCTCCTAAATACCAGAAACTAAACTCTAAAATCATACATTTCATTCTCTAAAATAGTTTTTTGCCCCACAAGTAATtggaaaaatacagaaaattcaACAAATCTTTGaatcataaaaataacaaacacaaaaatataaataatctcTTACTTTTCTTAACTCTTAatcgttttttttgtgtatgaatCAAAAACGGCTAAAATCACATCCAAAGATCCCTCCTCTGCAGTTATGTGTCATTACCGTGTAATATGTCAACAACCAGCGTGAAATATGTTCAAATACTGCAGATAAATGCGTTACAAACACGCTAAACCAAACATGGGAAATCCCTCCTTATAAAAAGCACTAAAACCAAAGCTCcagcaaataaaaacaaacgctGCAAAATCAGAGAAGTTTGTCAAATTTACCAAGAACCAGCGATTCTTTGAGTGTCTGACTTTCTTTTCTAAAATGAAGTGTGTCGGAGTTAAAGTATCCGTTCAGACTTTAAGGCCATAGCGCTTTTTGTGCAATTGGAAATTCACGCTCCAAAATGTACATCAGGCTGTTTAAAGCTCATTTTAACAGCAACTACAagaacacataaaaaaaactacaatgcaCCTTAATGCAAATCCTAATCACGTAACTATAAGTTCACGAATTTAAGTCACTAGTACATTTTTCTGTTATGTCTGTCAGCATCTGACTGCACCAAACTTCTGTACATTAACTTTCTTTGGCAAACAAGCCGAATATGATTGTATGTAATATTCTATGTAATAGAAAAGAAGAGCGGTGACGTTCAACATGTCAAAAGAGGCATTTGACTTCAGCGTTGGAAGGTGCAACGATGTGTCACACTGACAACGGGCCTGAGTCCACCAGGAGATCTCTCTACACTGCTCTTTGGCATTTGTAATTCCTAATTATAGAGAATATATAGAGAATATACTGTAGATCAGTATGCCTCACAGATTTGGTAAAATATCATGTTTTTAGTTTAAAATTCAAATCCGTTTCTCGAACTGTCTGCGAGTGACCCCAAAGCCTAATAGTGAGGATCATAGATATGCTATTTTCAATTTTTAAATAAGCTTGTTTGtacatttaaacattattagttgtttttcaGCAATGCAGCCGACCGTTTTGCGACTCTGCCTCTAATTTACATCACACATGATCAGTGTGACATTGTGACAAAAAACAATACGGAGGAATAAAGTTTACGGTTACTGTCCACTGACAAGATGGCTCTCCTGCTATCTCAGCATAAGCAGCACCGTTCTTTCCTTTGAGATGGCAACAGAGACAATGAGTGAGAAAGCGATTTGTAGAAAACTGCCACAGTCTGCCTTGCCTTCAAACATTTGTTTAGACAAGTAATCAAAAAGTAATCAATTGTAATATGTTACATTACTTTATTAAAGTAATTCAAATAGTAACGGTACCTATTACCAGACCCAAACGGaatctgcttctttttttattagattttttttttttttacagttttcagcggagatccagaatgaaaatctgcagaatttaGCAGACTGTTTTTCTGCAGGgggtggagatgtgttaacattctgagttgtattttatctttttaaaaatgtgtaattCGGTGGGAATTCTGTGTCCACAAATTCAGGTTAACTAGTCATCTTTAAACCTATTACATTTCAAAAGGTAACCTTCCCAACACTGAGCATTTATGCTTCTTTTCTGTCAGAATGGATGTAGTCTTGTTCAACCTGCAGATGCCTCCGGTCTATGACTGTAGTAAAGTGGGTGTGCCAGGTTTAGAGAAAGTCCCACATGTCACCACACGCCCTAACTGCACTGTCAGTGTAAAGAAGGCGTGGAGTGTGAGGGTTTACACTTTGGAGACATTGTTTGTGAGATGATCGTCATCTTCGTCGTCGATGCTCAGGTCCAACTTCAGGTTGTCCAGAGTCTGACGGATCGTCAGAGTCTCCTTACGCTTTGTCTGCAGGTGTTGGTCGAGCAGCTGCCTCTGCAGCCGGCTGTTGGTCTCCCTCTCCTCGGCCAGCTCTCTCTGGGTGTGGCGGTACTGCGCCTCCCTCCTGCTCGTCTCCTCCTCCGCCTCGTTCAGCTGGCGCTTCAGAGAGCGCATCCTCTGGGTCATCAGGTCTTTCTGCTCTGTAGCTATCCGGTGTTCCTCTTCCATCTGATCGCTCAGCTCGTTGATCCTCCTCTCCAGTTTACTGATGGTGTTTGTCAGAACAGACTTGTTCctctcctctgtcctcagaGTGTTCTCCAGCTCTTTGACTCTGCTCTCCGCCCGGGAGATGACGTCCTCCTGAACTCTGGAGCTGTGAAGCTCCTCCACCTCCAGACGCAGCTCACGCAGCTACACACCGG

Function

NR:

description
PREDICTED: EH domain-containing and endocytosis protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234856 True 3331 TUCP 0.38 4 7152870 7160087

Neighbor

gene id symbol gene type direction distance location
txnl1 txnl1,LOC102796010 coding downstream 790767 6353213 ~ 6362103 (-)
nars1 nars coding downstream 805220 6328407 ~ 6347650 (-)
fech fech coding downstream 830717 6297741 ~ 6322153 (-)
LOC120545633 NA coding downstream 1233398 5907359 ~ 5919472 (-)
LOC120545631 NA coding downstream 1246170 5900452 ~ 5906700 (-)
LOC120545786 rab27b,LOC104935727,LOC103374166,LOC104963949,LOC108228659 coding upstream 28108 7188195 ~ 7274967 (-)
LOC120544992 NA coding upstream 135422 7295509 ~ 7297921 (-)
LOC120545581 NA coding upstream 164455 7324542 ~ 7361945 (-)
kcnv2a kcnv2,LOC102778926 coding upstream 220357 7380444 ~ 7393965 (-)
vldlr vldlr coding upstream 236967 7397054 ~ 7466061 (-)
G173418 NA non-coding downstream 653723 6498867 ~ 6499147 (-)
G173410 NA non-coding downstream 656971 6455597 ~ 6495899 (-)
G173361 NA non-coding downstream 781133 6371031 ~ 6371737 (-)
G173335 NA non-coding downstream 824755 6327187 ~ 6328115 (-)
G173324 NA non-coding downstream 868670 6270430 ~ 6284200 (-)
G173467 NA non-coding upstream 1637 7161724 ~ 7162217 (-)
G173526 NA non-coding upstream 133943 7294030 ~ 7294426 (-)
G173550 NA non-coding upstream 217040 7377127 ~ 7378374 (-)
G173554 NA non-coding upstream 316454 7476541 ~ 7477005 (-)
G173561 NA non-coding upstream 327510 7487597 ~ 7487905 (-)
LOC120546140 NA other downstream 332004 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 778381 6368307 ~ 6374489 (-)
LOC120545230 NA other downstream 1752192 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 2255513 4846279 ~ 4897357 (-)
G172920 NA other downstream 2381567 4770817 ~ 4771303 (-)
G173727 LOC107687935 other upstream 1197636 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 1465395 8625482 ~ 8634067 (-)
G173900 NA other upstream 1910075 9070162 ~ 9071208 (-)
G174120 NA other upstream 2682725 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 2700914 9861001 ~ 9903007 (-)

Expression


Co-expression Network