G173638


Basic Information

Item Value
gene id G173638
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 7824687 ~ 7825279 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235059
CACATGTACTGACGTCCTCTTCAGCAGATAGGAATGCGTACAGTTCTAGCTTCTGTGTATTTGTGCAGTTAAGAGTCCTCTCGCTGAGTTGACTCTGCACTGCAGGCAGAGCCGAGTCTGACTGGAGCTATGTAGCCGCAATGTAAAACCTCCCTCTGGGTTTTCTCATGGGAATccagtagtttttttttgtacttacaTTGCTCAATCGGTGTGCGAAAACAACTACTTTTTGTAGTaatctgaaaaaataaataatcagaagatagtgttgtcctttgggtcttactttacaagaaacagggtttagaaagcaattctcaacaaagtaaacggaagtacataatccttgtgttgtccttcgggtcccagtgacccgaaggacaacacaagggatagCAGCACTTCTTACACAACTCTTTTGTCCCACCTTGTTACGGGAAGTAAAGAGCTCTGGAGTTTCCCGGCTACAGAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235059 True 478 lncRNA 0.44 2 7824687 7825279

Neighbor

gene id symbol gene type direction distance location
htr1ab LOC103375131,LOC101466473,LOC102210591,LOC100704763,LOC104923798 coding downstream 42211 7780288 ~ 7782476 (-)
parm1 NA coding downstream 144535 7664258 ~ 7680152 (-)
scpp8 NA coding downstream 184198 7635420 ~ 7640489 (-)
sh3bp2 sh3bp2 coding downstream 302596 7479129 ~ 7522091 (-)
vldlr vldlr coding downstream 358626 7397054 ~ 7466061 (-)
c7b NA coding upstream 22445 7847724 ~ 7866608 (-)
gadd45gb.1 LOC102786399,LOC101463858,LOC102303517 coding upstream 121583 7946862 ~ 7948604 (-)
LOC120545849 NA coding upstream 235168 8060447 ~ 8073342 (-)
LOC120545930 LOC104928480,LOC103353414,LOC103474014,LOC105936569 coding upstream 273580 8098859 ~ 8202622 (-)
LOC120545589 NA coding upstream 558236 8383515 ~ 8388610 (-)
G173573 NA non-coding downstream 195934 7628541 ~ 7628753 (-)
G173564 NA non-coding downstream 288071 7536365 ~ 7536616 (-)
G173561 NA non-coding downstream 336782 7487597 ~ 7487905 (-)
G173554 NA non-coding downstream 347682 7476541 ~ 7477005 (-)
G173550 NA non-coding downstream 446313 7377127 ~ 7378374 (-)
G173661 NA non-coding upstream 84092 7909371 ~ 7912301 (-)
G173673 LOC107375064,LOC107094677 non-coding upstream 116309 7941588 ~ 7944249 (-)
G173689 LOC104960898,LOC105903926 non-coding upstream 262888 8088167 ~ 8088441 (-)
G173704 NA non-coding upstream 405380 8230659 ~ 8230858 (-)
G173713 NA non-coding upstream 456406 8281685 ~ 8289130 (-)
G173470 LOC103389048,LOC105418623 other downstream 664600 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 1003821 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 1450198 6368307 ~ 6374489 (-)
LOC120545230 NA other downstream 2424009 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 2927330 4846279 ~ 4897357 (-)
G173727 LOC107687935 other upstream 532444 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 800203 8625482 ~ 8634067 (-)
G173900 NA other upstream 1244883 9070162 ~ 9071208 (-)
G174120 NA other upstream 2017533 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 2035722 9861001 ~ 9903007 (-)

Expression


Co-expression Network