G173727 (LOC107687935)


Basic Information

Item Value
gene id G173727
gene name LOC107687935
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 8357723 ~ 8358027 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235162
gttccacctgcaaagcgtctcctaagcaaagaggttgagacggaccacggagtgaaaacaatgaaaagtacgctcttagagtctgtcagcacacgtttcagtgagatctattcggatcctctgcacttcatcacgactgtacttgatccgcgttataaagaccattacttggatgcggaaataaagcagggcgcacgagaaatgatccaggccgccatggatgcggagaacccgcatggagacggagacggagcagcgcccagcgcaggaggagatcagagcgcagaaaaaaagactggtctcgc

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235162 True 305 TUCP 0.52 1 8357723 8358027

Neighbor

gene id symbol gene type direction distance location
LOC120545930 LOC104928480,LOC103353414,LOC103474014,LOC105936569 coding downstream 155101 8098859 ~ 8202622 (-)
LOC120545849 NA coding downstream 284381 8060447 ~ 8073342 (-)
gadd45gb.1 LOC102786399,LOC101463858,LOC102303517 coding downstream 409119 7946862 ~ 7948604 (-)
c7b NA coding downstream 491115 7847724 ~ 7866608 (-)
htr1ab LOC103375131,LOC101466473,LOC102210591,LOC100704763,LOC104923798 coding downstream 575247 7780288 ~ 7782476 (-)
LOC120545589 NA coding upstream 25488 8383515 ~ 8388610 (-)
LOC120545024 LOC103353409 coding upstream 133079 8491106 ~ 8530029 (-)
slc30a5 slc30a5 coding upstream 200743 8558770 ~ 8575540 (-)
LOC120546028 NA coding upstream 218476 8576503 ~ 8586809 (-)
tmc2a LOC105921883,LOC107083736 coding upstream 232242 8590269 ~ 8616964 (-)
G173713 NA non-coding downstream 68593 8281685 ~ 8289130 (-)
G173704 NA non-coding downstream 126865 8230659 ~ 8230858 (-)
G173689 LOC104960898,LOC105903926 non-coding downstream 269282 8088167 ~ 8088441 (-)
G173673 LOC107375064,LOC107094677 non-coding downstream 413474 7941588 ~ 7944249 (-)
G173661 NA non-coding downstream 445422 7909371 ~ 7912301 (-)
G173744 NA non-coding upstream 74975 8433002 ~ 8438975 (-)
G173761 tjp2,LOC103353410 non-coding upstream 97737 8455764 ~ 8468380 (-)
G173765 NA non-coding upstream 120329 8478356 ~ 8479247 (-)
G173768 LOC103353410 non-coding upstream 125852 8483879 ~ 8484249 (-)
G173778 LOC103353408 non-coding upstream 180093 8538120 ~ 8548012 (-)
G173470 LOC103389048,LOC105418623 other downstream 1197636 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 1536857 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 1983234 6368307 ~ 6374489 (-)
LOC120545230 NA other downstream 2957045 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 3460366 4846279 ~ 4897357 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 267455 8625482 ~ 8634067 (-)
G173900 NA other upstream 712135 9070162 ~ 9071208 (-)
G174120 NA other upstream 1484785 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 1502974 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 1739224 10097251 ~ 10108289 (-)

Expression


Co-expression Network