G173840



Basic Information


Item Value
gene id G173840
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 8635736 ~ 8636254 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU235324
CTTCTTCTGTAACGTGACTTCTTTGTTAACTGCGAGATTTCCGATTTCGCCCAGCGCCGCTCGAGGCTTCGTGGGACCAGCGACCGAGCAGGCCTTACCACCGAGGTCAGTCCTGGTGGAAGCCAAGCGGTTCTGGTTACTCGTAGAGCCATTTCGAAATATGCGTTGCTTCTACACAAACCACGGACAATCGTAATGGAGAATGATGCAGGGTAGTTTTTAGGGTTCGGCGTCCTGGTTTAAATCCTCGCTCGCTACAAGCTGATTCGCT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU235324 True 271 lncRNA 0.52 2 8635736 8636254

Neighbor


gene id symbol gene type direction distance location
tmc2a LOC105921883,LOC107083736 coding downstream 18772 8590269 ~ 8616964 (-)
LOC120546028 NA coding downstream 48927 8576503 ~ 8586809 (-)
slc30a5 slc30a5 coding downstream 60196 8558770 ~ 8575540 (-)
LOC120545024 LOC103353409 coding downstream 105707 8491106 ~ 8530029 (-)
LOC120545589 NA coding downstream 247126 8383515 ~ 8388610 (-)
pmchl NA coding upstream 28571 8664825 ~ 8665456 (-)
LOC120545257 npr2,LOC102310518 coding upstream 63705 8699959 ~ 8784342 (-)
alad alad,LOC102791750 coding upstream 159576 8795830 ~ 8812094 (-)
ssna1 ssna1,LOC102792612 coding upstream 216533 8852787 ~ 8856729 (-)
stxbp1a stxbp1,LOC101480228,LOC106536584 coding upstream 986171 9622425 ~ 9706925 (-)
G173778 LOC103353408 non-coding downstream 87724 8538120 ~ 8548012 (-)
G173768 LOC103353410 non-coding downstream 151487 8483879 ~ 8484249 (-)
G173765 NA non-coding downstream 156489 8478356 ~ 8479247 (-)
G173761 tjp2,LOC103353410 non-coding downstream 167356 8455764 ~ 8468380 (-)
G173744 NA non-coding downstream 196761 8433002 ~ 8438975 (-)
G173848 NA non-coding upstream 56131 8692385 ~ 8692745 (-)
G173865 NA non-coding upstream 240427 8876681 ~ 8877345 (-)
G173874 NA non-coding upstream 263099 8899353 ~ 8903114 (-)
G173895 NA non-coding upstream 298893 8935147 ~ 8935592 (-)
G173906 NA non-coding upstream 467698 9103952 ~ 9104183 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1669 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 277709 8357723 ~ 8358027 (-)
G173470 LOC103389048,LOC105418623 other downstream 1475649 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 1814870 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 2261247 6368307 ~ 6374489 (-)
G173900 NA other upstream 433908 9070162 ~ 9071208 (-)
G174120 NA other upstream 1206558 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 1224747 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 1460997 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 1742702 10378956 ~ 10395744 (-)

Expression



Co-expression Network