G173924


Basic Information

Item Value
gene id G173924
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 9275174 ~ 9276352 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235433
CAACATTtggttatgtattttttttttattcagctgACAAAATTCTTTGAATGAGCTAATGGCGGGATCACACGAGAAAGATGTCCAGCATGTCATTTCAGATTTTTTAAAATGATACTTTACTTGTTTAGTACAAATTAACAATGATCAGTCTCAGCCAGCTAAGGCAATCATATGGAATGATGATATGACAAAtctaaatataaaaagaaaacacgGAATATTAAACACCAGGCTAGAATTGCCAACCCATGGCAAACATGCTTGAACATTTATCCAATTCCTCTAGTTAAGATTAAGTACATTTCTTTCCGGTTATATATCAGTGGCACGCCTCATCTCTACCGGTGAGAATTTTGTTTAAGAAAGAAAACGAGTTTTGGTGTTTTCCAGCTGCTGAGCCGACATAACTCCCTGAGATCTCACTCAAATGAATCCTCTACTCCCTGCAGACAGTGCACACTGCACACCACTCATCACGCACTGCTGACCGACTCGGAGACGCAAACACCAAATCCTCATTCTGCTGAGAAGCTACAGGGTTTGCTTCTTTTCTCTGGACTCAAGCACTTCTCAGATCGAATGAAGCAGAAATTAAGGTTGACAGCAATTACTAACTGCTAAGTGGGTGGTAATAGgcactttatttttcaccagGGGGCCAAAGAAGCTCTGCTGGGCCGGGGGCAATATTCTTGCACTTACTCTACAGCCAAACCTATGCACGTCTTTACAGTGAAAGAAATTAGAGTATTGTTCTGGGAGGAAATAGATGGATCTGTAGACTCTGGCCGCTTAGCTTCAGTCTTTGGTTTGCATGAGAATAACCGAACATGAGAGAATCTCCTTAAACACACTTGAATTTAACATTTCTACTGTTGAAACAGTAAACAGTCCAATGAGATCTAATGAAAATGTGGTAAAGTAATAAGTACAATCATCACAAACTGTTGAAGCAGCAGCAACGTTTCTATCACAGACCTTCAGGGAAATTGGGGCTTAACGGAAGCCTGATAATCAGACTGAATTACCATTTTGTGTCACTTCATTTTTTAGTCTTACATTGTGTTTATGATTTTTGTTTGAAAGGCAATACTTTCCCCCCCATTTTTTTCCTAATCCGTAATCTTTGTGATGGGTTGATGCAGCCTGCTGCTGTATTATAAACATGCTTAGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235433 True 1179 lncRNA 0.39 1 9275174 9276352

Neighbor

gene id symbol gene type direction distance location
ssna1 ssna1,LOC102792612 coding downstream 418445 8852787 ~ 8856729 (-)
alad alad,LOC102791750 coding downstream 463080 8795830 ~ 8812094 (-)
LOC120545257 npr2,LOC102310518 coding downstream 490832 8699959 ~ 8784342 (-)
pmchl NA coding downstream 609718 8664825 ~ 8665456 (-)
tmc2a LOC105921883,LOC107083736 coding downstream 658210 8590269 ~ 8616964 (-)
stxbp1a stxbp1,LOC101480228,LOC106536584 coding upstream 346073 9622425 ~ 9706925 (-)
slc31a2 slc31a2 coding upstream 445342 9721694 ~ 9732993 (-)
arrdc1b arrdc1 coding upstream 458103 9734455 ~ 9778180 (-)
LOC120544929 LOC102775582,LOC102289500,LOC103364605,LOC106529419,LOC102193727,LOC108241375 coding upstream 505845 9782197 ~ 9792340 (-)
mamdc4 NA coding upstream 522732 9799084 ~ 9831228 (-)
G173912 NA non-coding downstream 144230 9127305 ~ 9130944 (-)
G173911 NA non-coding downstream 149995 9124882 ~ 9125179 (-)
G173910 NA non-coding downstream 154572 9120314 ~ 9120602 (-)
G173907 NA non-coding downstream 161611 9113364 ~ 9113563 (-)
G173906 NA non-coding downstream 170991 9103952 ~ 9104183 (-)
G173938 NA non-coding upstream 498 9276850 ~ 9277283 (-)
G173940 NA non-coding upstream 6765 9283117 ~ 9283390 (-)
G173941 NA non-coding upstream 7471 9283823 ~ 9284028 (-)
G173942 NA non-coding upstream 8724 9285076 ~ 9285333 (-)
G173943 NA non-coding upstream 20041 9296393 ~ 9297614 (-)
G173900 NA other downstream 203966 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 641107 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 917147 8357723 ~ 8358027 (-)
G173470 LOC103389048,LOC105418623 other downstream 2115087 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 2454308 6820812 ~ 6820866 (-)
G174120 NA other upstream 566460 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 584649 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 820899 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 1102604 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 1877415 11153767 ~ 11164494 (-)

Expression


Co-expression Network