G174116


Basic Information

Item Value
gene id G174116
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 9795843 ~ 9796971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235693
acgaagcgtatgaaaataaaaccacaagccaggctacccctgctgctgcaggcaaagcatagctcgttagctcagcaagcaagcaacacgtcagtaaaggatatttgccgtttgtgtaatgagaatttaggaataaaaggccccatttcaggttcccgctccatattccaaaagaaggatccaagagaaaaaagcattagggagcggctaacagaattagggctaccgcggttagctgattggataaaccatctctCTATTACCACCTACGTTGGTGatagtcgcttctcgttgcgtcacacctaaacccgcctcaaaaccaacgctgattggtcggtcgtttggcgaacggctcaaaattttctctatctcaagatgccagactgatctgcgagtggaaaactggagctcgcgagatcaggacgagGAATTAACTGGCTGTGTTCCCGAATGCTTCCAGAGTAACATGTAAATACTCAATTTGTTATTATAACTAAAATATTCATTTATGGTTGGGGTAAGGCTGTGGACCTGGCTTTGTGCACGGAGGCGTTATATATACTTAGGCTACTGCAGTATTAAGACTTCCCTTTACTGGAACTACAGGTCATAAGCCAAAGCGCCCAGATGTGTCGGGGAGCATGGAGGACAAGCAGCCAGTCGTTCCGGCCCGACAGAGGAGGGCGGGACCTGAGGAAGAGCGGACGCATTGTGAGGAAAGCCTAATAAAGACAGAAACTGTGGACACTTGCTGTAGAAGAACTTGAATGGCAGCAAACCGAGCCAAGCTAAAATCAACAGCAGAATTTGCATACTGAGTGGCGGCGAGtactgtgaatatggctctgcTGAGGTTTGGGAGCCCAATCCAGCAGATGCCCTCTGTAGATGcagatggttaaaaaaaaaaaaaacattttgcagtgaCGCTCAAATTTGTTTGTGAGTTCTTTGTCTTATAGTCCCA
>TU235695
acgaagcgtatgaaaataaaaccacaagccaggctacccctgctgctgcaggcaaagcatagctcgttagctcagcaagcaagcaacacgtcagtaaaggatatttgccgtttgtgtaatgagaatttaggaataaaaggccccatttcaggttcccgctccatattccaaaagaaggatccaagagaaaaaagcattagggagcggctaacagaattagggctaccgcggttagctgattggataaaccatctctCTATTACCACCTACGTTGGTGatagtcgcttctcgttgcgtcacacctaaacccgcctcaaaaccaacgctgattggtcggtcgtttggcgaacggctcaaaattttctctatctcaagatgccagactgatctgcgagtggaaaactggagctcgcgagatcaggacgagGAATTAACTGGCTGTGTTCCCGAATGCTTCCAGAGTAACATCGCCCAGATGTGTCGGGGAGCATGGAGGACAAGCAGCCAGTCGTTCCGGCCCGACAGAGGAGGGCGGGACCTGAGGAAGAGCGGACGCATTGTGAGGAAAGCCTAATAAAGACAGAAACTGTGGACACTTGCTGTAGAAGAACTTGAATGGCAGCAAACCGAGCCAAGCTAAAATCAACAGCAGAATTTGCATACTGAGTGGCGGCGAGtactgtgaatatggctctgcTGAGGTTTGGGAGCCCAATCCAGCAGATGCCCTCTGTAGATGcagatggttaaaaaaaaaaaaaacattttgcagtgaCGCTCAAATTTGTTTGTGAGTTCTTTGTCTTATAGTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235693 True 967 lncRNA 0.46 2 9795843 9796971
TU235695 False 815 lncRNA 0.48 2 9795843 9796971

Neighbor

gene id symbol gene type direction distance location
LOC120544929 LOC102775582,LOC102289500,LOC103364605,LOC106529419,LOC102193727,LOC108241375 coding downstream 3503 9782197 ~ 9792340 (-)
arrdc1b arrdc1 coding downstream 17663 9734455 ~ 9778180 (-)
slc31a2 slc31a2 coding downstream 62850 9721694 ~ 9732993 (-)
stxbp1a stxbp1,LOC101480228,LOC106536584 coding downstream 88918 9622425 ~ 9706925 (-)
ssna1 ssna1,LOC102792612 coding downstream 939114 8852787 ~ 8856729 (-)
mamdc4 NA coding upstream 2113 9799084 ~ 9831228 (-)
phpt1 phpt1,LOC104936327,LOC101477977,LOC106536853,LOC100711007 coding upstream 34329 9831300 ~ 9834777 (-)
LOC120545811 LOC103364603 coding upstream 38842 9835813 ~ 9857844 (-)
zgc:92275 LOC107665231,LOC107754619,LOC106565467 coding upstream 126235 9923206 ~ 9938950 (-)
LOC120544996 LOC104958126 coding upstream 145742 9942713 ~ 9948797 (-)
LOC120545476 NA non-coding downstream 457425 9337767 ~ 9338418 (-)
G173944 NA non-coding downstream 497365 9297725 ~ 9298478 (-)
G173943 NA non-coding downstream 498229 9296393 ~ 9297614 (-)
G173942 NA non-coding downstream 510510 9285076 ~ 9285333 (-)
G173941 NA non-coding downstream 511815 9283823 ~ 9284028 (-)
G174139 NA non-coding upstream 247661 10044632 ~ 10045354 (-)
G174143 NA non-coding upstream 291311 10088282 ~ 10088523 (-)
G174166 NA non-coding upstream 398105 10195076 ~ 10284037 (-)
G174168 NA non-coding upstream 439774 10236745 ~ 10239274 (-)
G174196 NA non-coding upstream 534356 10331327 ~ 10335010 (-)
G173900 NA other downstream 724635 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1161776 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 1437816 8357723 ~ 8358027 (-)
G173470 LOC103389048,LOC105418623 other downstream 2635756 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 2974977 6820812 ~ 6820866 (-)
G174120 NA other upstream 45841 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 64030 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 300280 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 581985 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 1356796 11153767 ~ 11164494 (-)

Expression


Co-expression Network