G174139


Basic Information

Item Value
gene id G174139
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 10044632 ~ 10045354 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235726
TGTAGTGCAAAACATTGAAGACGATCTTTATTGTTCACAGTTAAATACAAGCCACTGCTTTAGGAACTTccttttttgccattttatcCCAGATTCTCCAGCTCTGGTCAGAGTCCTGGTTTCTTCAGTTTGTGCTGATTGTACCTTCTGTCTTTGTTTGCGGTAGTTACTACGGTTGGCATTTAAAGTGGATTGTTGAACATGCTTTAGATAGCGAGGCAAAAGGAAGTGACAGCAGGAGTTCTCGGTGGACAACAGGATTTGGACGACTGTCAATACCGGAGTTTACTTCTAATACTCGGTAGAAACGAGGTAACTGCCCGTTTATCAGACCTGCAGAAGGAAACCTGATTGGACAAgatgtttttggttttgtttcacACTTTACCAGCTGAATGTACACGCAACATGAGAAACAACACTTCTGTTAAAgcataactctcgccaaaatgcaacctggggtctttttgtgaatatacCAGAGTCAAACATTCGCTTaaaacaggggtgtcaaactgaACTTCAGTgggggccacactggaaaatgagaatcacatcaagggccagatgTAGAGTTCATTGACATggttttatttaagagaaaagtcaaatatctttgaccgTATTATCGtatgtcttataaagtcttctcagttacagtttggtcgacataaagtcctaaaaaaagttctttagccatcatagaagaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0007420 brain development biological_process
GO:0030902 hindbrain development biological_process
GO:0060322 head development biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU235726 True 723 lncRNA 0.39 1 10044632 10045354

Neighbor

gene id symbol gene type direction distance location
gfi1b gfi1b coding downstream 45065 9993598 ~ 9999567 (-)
gtf3c5 NA coding downstream 60607 9972694 ~ 9984025 (-)
LOC120544999 LOC103362077 coding downstream 72782 9966088 ~ 9971850 (-)
LOC120545003 LOC103362077 coding downstream 81016 9958707 ~ 9963616 (-)
LOC120544997 LOC103362077 coding downstream 89895 9950160 ~ 9954737 (-)
barhl1b barhl1,LOC100712077,LOC102792687 coding upstream 97716 10143070 ~ 10150003 (-)
gsna gsn coding upstream 155712 10201066 ~ 10226381 (-)
si:ch211-127i16.2 LOC103374795,LOC101469412,LOC102289489,LOC100706625,LOC102789715 coding upstream 727503 10772857 ~ 10824728 (-)
vav2 vav2 coding upstream 868360 10913714 ~ 11140925 (-)
rxraa rxra,LOC102786191,LOC102297781 coding upstream 1138508 11183862 ~ 11417652 (-)
G174116 NA non-coding downstream 247661 9795843 ~ 9796971 (-)
LOC120545476 NA non-coding downstream 706214 9337767 ~ 9338418 (-)
G173944 NA non-coding downstream 746154 9297725 ~ 9298478 (-)
G173943 NA non-coding downstream 747018 9296393 ~ 9297614 (-)
G173942 NA non-coding downstream 759299 9285076 ~ 9285333 (-)
G174143 NA non-coding upstream 42928 10088282 ~ 10088523 (-)
G174166 NA non-coding upstream 149722 10195076 ~ 10284037 (-)
G174168 NA non-coding upstream 191391 10236745 ~ 10239274 (-)
G174196 NA non-coding upstream 285973 10331327 ~ 10335010 (-)
LOC120545915 NA non-coding upstream 320170 10365524 ~ 10367785 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 141625 9861001 ~ 9903007 (-)
G174120 NA other downstream 201133 9842812 ~ 9843499 (-)
G173900 NA other downstream 973424 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1410565 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 1686605 8357723 ~ 8358027 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 51897 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 333602 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 1108413 11153767 ~ 11164494 (-)
G174439 NA other upstream 2311574 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 2345201 12390555 ~ 12391484 (-)

Expression


Co-expression Network