G174166


Basic Information

Item Value
gene id G174166
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 10195076 ~ 10284037 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU235759
AGCTTCATTCAGGTCATCTttaatgacaaaatgttttaTCAATTCTTCCAAGGTAatggggaaaaagaaaatcaaagcaAATGCATTATTACAATAACTACTGTTAGACCATCACAGCCTGAGGGAAGTCTCTTTCCACACTTCACACTCCTATATTCACATCAGGTCCTGCCATCAACAATAGAGGTTCTATTTTCACACTTTAAAACTTGACTTCCGCTCTGTGCGTTCACAATCTTTTTGCAACATcacggggaaaaaaaacaacaacttaaaaACAGACTACTTGAAACAAACCAAACAGGAAAGAACAATCCAAAATGCCGCTGTCAAACACTGCATGTACAAACACAGGCACCTCTGTGGCTGAAACAGAGACAAAACCCCAGTCATTGTTGGTAGTTAATGAGTCGTACGAGGGAAAACAAAAAGGTAACGCGTCCTGAGTCGACCTGCTGGGTCAAATAGCATTTgcagcttttatttatttaaaaataaaataaaaaggaggcCAATTCTACTTTAActtcaagtagatttttcagatattttcaCATCTATGCCTTCAAGTGGGGTCGACGAAAGCTAAACTAAAATCTTCCTCACAGTTGTGACATACATTGATTTTAAAGACTGTCAGAGCTCATAGAAGTTACTTCTTTAAGTTAAGTTTTTCTCTCCGGGAAATGTAACACTGAAATGGAAGTTAtcagaaaataattttttgaaaAGGCAACAAAGTAACGTCAGGCGGTGTAATGCTCACCTTTAAAACTGAAACTCAATGTGTCATCCTATAAGTAAAAACCTGTACATTTGTCAAAGTAGTTAGcaacaagaaaaataaaaaagcagaaaaaaaccctCACTTCTAAATCAAATATTACTTGACCCAGGACTGGCTGTGGAAGGTCCACTTGGGACAAAACTGACCACAGTCGATGTCTGATATCAAGCTTTTTAATCATGCTGTGGACCTTACTGAACATGCTAGCCAAGTACCTGGTGTTTACACCTAAAGTAGTAAACCTCCCTGCAGTCGATTAGAAGTCGCTGCACATCTGCAAAGGTCAAACTGAGGACCACGTTTGGCCTGTCAAAACCCTGGAATCAGTTCCCTTCATCTGCAGCTTGATGAAGTATTTCTGTGGAAATTTTGGCAAATGTGTTGGAGTGTTAAGGGAGCAGGGCTGGCTATCACtggacattttttaacaaagaTAGTGGCGTTAAAAACAATTCTCCTGATCCAACCAATATCTTTAAAGTCAAAGTCAATGATTTCAAGCTTAATATTTAACTCATCTTTCagaaaatagtttaaaaaattaaaaaaaaaaaaaatgtatataagcagcattttcctaaaaaaaaaacaatttatggtctaatacacaaataatccctctcaatcattACTTATGACCCACTAGAAGTGTGTGGCGATGTCTGTATCTGCCCTCTCTTGTTATTTTGCTGCATGTGGGATGTTTCTGGGCATCAACCATAGTCTTTGGGCCCCACGTAAGTGTGTAACGCCCAGCCAATAACAGCACGCAGAGTGTGCAGCCCGGTCACCTCGCTGTCGCTGTGCTGTtcgacagacacagacacacatgcagcgACAGGATGAATCTCTGCATTCACACAAACCTTCCCGCTGAGGTGTGCggaggtgcaggtgtgtttagttGCGCTTTAGAATGTAATTGCCGTGAAACAAACAATCAGAAAACAACGAGTTATTCCCCCGATTCACGACTTTGTTCTCGCTGGTGCCACTCCCTTTCTCCATTCACTCTCTAGCTTGCTCGTCCGCcgctgctttctctctctcccctagaGGAGGGGAACGCTGTGTCTCTACAAACCGACCAACCGACAAATCCTGCTTAGTATACCTtaacttttaaataaatctACTCAAACATCCTTGAAACAAATGTCAATAAAGCAAGTTCTCTTTATTTCAAATCTCACGTTTTTAAGCTTTTTGGTCGGAAGCCTTCTGGATATGACCACAGTGGCGTGTCATAGCCAGCCCAATCTGGAGTAAAAGTAAGTGGGACCTGAGCCGTAAGGATCAAACCAGCTCTACAATATGTTGCAGACATACCAGGAAGCTCACTGGAAGAACAACGTGGACGCTGAACATTTCTGGACCGTACAGTGGCGTTACACTAGCCTGGCTCCACCCTCCTACGTAATGCCGCTCAATTTTAATTTTCCTttagtactccgtctgggtttgcggtatattcgcgggttttctccggccaatctttaccggtccaatcagcgaacagagggagtggctgagaacgatggcATTGAGactgtgcgctagtttgagttgtagttccgtaatggcggcggagaaagatgcgagcgaagccattcggccCGTTGTGGCAACATTgcagaatatccagaagttaaagcccgagcaagaacaatcattgctgagttgtgttggtggccatgatgttgtggccctcctccccacggggttcgggaaaagttagattttcctgctcgctccgttagtggtgaaggagttggctaaggcaaACGCTaccgatgctaagccgacgtcacgaccaaacgttagcgattggttatggcagatccagagtggctctgggcagatccaatagttttaaacttcaacagagtacccgccttcaaggaagttaacacttgtcaatggagagtggccagactctctggacaaagGAAATgtcccagagtctggtaggaccaggctagcgtTACCCAAGGCCCAACCACAAAATACTGTTAGTGTACACGCTGAGAAGGACgcactgcctgcctgcctccacAGCACACATCTACACTCTGGTTTCCAGTTATTGTCACTTTGCAAAATATTCATTTGGATGCAGAATTGAATAGATTTTCATATCTATAGTTTCCATCACAGAAAAGTCACATAAATCTCTCTTTATAAGCCAGAGACTTCCCCAGTGCAAATCACGAGCGTTTGTGGTTTAGGATGGCCACTATGGTAACCCCTGTCATCGTTACACCTTCTCAATAAACCACTGTTGTAaaataacaatacaaaaaactatattaaaagaaaattaacaaAATGGCTACTTTCAAAAAGGCATGATTACAATTCCAGTTTGCGAAGCTAACTCTGAATTTGGTTGAATCCTTTTAGAGATCTGAGTGTTGGGCTACTCATGTAGGTGGCACAATCTGTGGTCATTTCTAAAACTGGACAGTCCTCCCTTGTTGTCAGATGATCAAGGGGTAGTGTGTAGTAGAAGAGTTTGGTTTGATGCTGCAACCCTCCCTGAAAACCCACCCGTTATAAACATTAAACCCAAATCGCTGGGGAAAAGGAAATATGGGACCTTATTCATTTTTTGAAAAGCTTACATAAATGAGTGAAGGATATAAggcaggaggagggggggagggggggggtatCTACAGAGAGTCAGAGAACAGCCAGTCAAGAAATAAAGGGTGGGGAAGGATGCATTTCTCCTGAGAACATGTCATATCTCAGGGACGAGGAGGGGAAGTGGGGGGCAGGCGGGACAGAGGGAGAAGACACGGGCGTTTTTTCTTCTCACGACAGCAAAACTTTCTTCGACAATTCGTGGCCACTTCTCAGGCACTTTTTCTTCCGTTTCAGGCTCAGAAGGAGCTGGCGGGTGGCGTGGTCAGCCTCTTCCCGATTAGCCTGAAAACTGACCCACGAAGATGTCAACTGTGTGATTACAGTTGATATCCAAATAGCTTATCAATTCAGCCAGATGCCAGGGGCCAGATGATGGCAGCAATGCACACTTTGCCATTTGAGTTTTGGGCAAACTGGCTCTAAGCAAGGTGGCACTGTAATCCTGCATTCTGTTTTCCCTCAGTCTGTGTTTTTGGAGTCTCGTATTATTgcctacatttatttttactgaCTACATAATGTGTTTTCTGCATAATGCTTTAGAGTGCATTATTTCAGGGTTCCAGCCTTTTAGTTTCTCTCAAAAACAGCACATTTACAATCTAATATCTGCCTTTCTAACAATCATAGAAGTGTATAACAGTGAAGGAATGTCAGCACATTGACCTAATGACTCAGAACTGTAGAAGGATTGGCATCATGCCATGTAAGAGACTAGGTTTTAGCAAGACGGATCATTTTTTTAGTGTGATTGCAGAGTTGGGTGATCGTtttctgtgggtttgtcacctTAAGAGACACCTTTGAAATTacataatattaaatatttatcagtgcagctttaaattatACTTCAACttatataatatgtattattattct
>TU235760
TGTGTTACTAATCATATTAAGCTATTCAGTAATAATAATGCCTCTTTAAATGACTGAAGTATTAAACACACTCAGTGAAAAGCTTCATTCAGGTCATCTttaatgacaaaatgttttaTCAATTCTTCCAAGGTAatggggaaaaagaaaatcaaagcaAATGCATTATTACAATAACTACTGTTAGACCATCACAGCCTGAGGGAAGTCTCTTTCCACACTTCACACTCCTATATTCACATCAGGTCCTGCCATCAACAATAGAGGTTCTATTTTCACACTTTAAAACTTGACTTCCGCTCTGTGCGTTCACAATCTTTTTGCAACATcacggggaaaaaaaacaacaacttaaaaACAGACTACTTGAAACAAACCAAACAGGAAAGAACAATCCAAAATGCCGCTGTCAAACACTGCATGTACAAACACAGGCACCTCTGTGGCTGAAACAGAGACAAAACCCCAGTCATTGTTGGTAGTTAATGAGTCGTACGAGGGAAAACAAAAAGGTAACGCGTCCTGAGTCGACCTGCTGGGTCAAATAGCATTTgcagcttttatttatttaaaaataaaataaaaaggaggcCAATTCTACTTTAActtcaagtagatttttcagatattttcaCATCTATGCCTTCAAGTGGGGTCGACGAAAGCTAAACTAAAATCTTCCTCACAGTTGTGACATACATTGATTTTAAAGACTGTCAGAGCTCATAGAAGTTACTTCTTTAAGTTAAGTTTTTCTCTCCGGGAAATGTAACACTGAAATGGAAGTTAtcagaaaataattttttgaaaAGGCAACAAAGTAACGTCAGGCGGTGTAATGCTCACCTTTAAAACTGAAACTCAATGTGTCATCCTATAAGTAAAAACCTGTACATTTGTCAAAGTAGTTAGcaacaagaaaaataaaaaagcagaaaaaaaccctCACTTCTAAATCAAATATTACTTGACCCAGGACTGGCTGTGGAAGGTCCACTTGGGACAAAACTGACCACAGTCGATGTCTGATATCAAGCTTTTTAATCATGCTGTGGACCTTACTGAACATGCTAGCCAAGTACCTGGTGTTTACACCTAAAGTAGTAAACCTCCCTGCAGTCGATTAGAAGTCGCTGCACATCTGCAAAGGTCAAACTGAGGACCACGTTTGGCCTGTCAAAACCCTGGAATCAGTTCCCTTCATCTGCAGCTTGATGAAGTATTTCTGTGGAAATTTTGGCAAATGTGTTGGAGTGTTAAGGGAGCAGGGCTGGCTATCACtggacattttttaacaaagaTAGTGGCGTTAAAAACAATTCTCCTGATCCAACCAATATCTTTAAAGTCAAAGTCAATGATTTCAAGCTTAATATTTAACTCATCTTTCagaaaatagtttaaaaaaaaaaaaaaaaaagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235759 True 4321 lncRNA 0.42 2 10195076 10283957
TU235760 False 1422 lncRNA 0.37 2 10243727 10284037

Neighbor

gene id symbol gene type direction distance location
barhl1b barhl1,LOC100712077,LOC102792687 coding downstream 45073 10143070 ~ 10150003 (-)
gfi1b gfi1b coding downstream 195509 9993598 ~ 9999567 (-)
gtf3c5 NA coding downstream 211051 9972694 ~ 9984025 (-)
LOC120544999 LOC103362077 coding downstream 223226 9966088 ~ 9971850 (-)
LOC120545003 LOC103362077 coding downstream 231460 9958707 ~ 9963616 (-)
si:ch211-127i16.2 LOC103374795,LOC101469412,LOC102289489,LOC100706625,LOC102789715 coding upstream 488820 10772857 ~ 10824728 (-)
vav2 vav2 coding upstream 629677 10913714 ~ 11140925 (-)
rxraa rxra,LOC102786191,LOC102297781 coding upstream 899825 11183862 ~ 11417652 (-)
LOC120544994 LOC103357302 coding upstream 1768598 12052635 ~ 12053579 (-)
LOC120544995 LOC103357302,LOC104927697 coding upstream 1770647 12054684 ~ 12056612 (-)
G174143 NA non-coding downstream 106553 10088282 ~ 10088523 (-)
G174139 NA non-coding downstream 149722 10044632 ~ 10045354 (-)
G174116 NA non-coding downstream 398105 9795843 ~ 9796971 (-)
LOC120545476 NA non-coding downstream 856658 9337767 ~ 9338418 (-)
G173944 NA non-coding downstream 896598 9297725 ~ 9298478 (-)
G174196 NA non-coding upstream 47290 10331327 ~ 10335010 (-)
LOC120545915 NA non-coding upstream 81487 10365524 ~ 10367785 (-)
G174210 NA non-coding upstream 94557 10378594 ~ 10378853 (-)
G174233 NA non-coding upstream 218940 10502977 ~ 10504576 (-)
G174245 NA non-coding upstream 226549 10510586 ~ 10513636 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 86787 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 292069 9861001 ~ 9903007 (-)
G174120 NA other downstream 351577 9842812 ~ 9843499 (-)
G173900 NA other downstream 1123868 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1561009 8625482 ~ 8634067 (-)
adra1ab LOC104947653,LOC100705829 other upstream 94919 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 869730 11153767 ~ 11164494 (-)
G174439 NA other upstream 2072891 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 2106518 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 2347188 12631225 ~ 12637494 (-)

Expression


Co-expression Network