G174341



Basic Information


Item Value
gene id G174341
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 11766230 ~ 11766460 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU235976
TTATCTGTCAGCTCCAGCCTACAGGTTTTAATGGCTTGTGGTGCGCGACATCCGAGTCCGCATGACGCGCTCTCCACAGACAGGTACCGTCCTAATCCACTATAGCCCGGTCTCTCCGCGCAGCCGCCGACTCCAAAGCGCACCTGCCCTTTACTCTCCCGGACCTGGATGTGCTATCCGGTTAAGTTCTGCATCTATAACCGTACAGCTGAAACGGGGCGAATGTCATTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU235976 True 231 lncRNA 0.55 1 11766230 11766460

Neighbor


gene id symbol gene type direction distance location
rxraa rxra,LOC102786191,LOC102297781 coding downstream 348578 11183862 ~ 11417652 (-)
vav2 vav2 coding downstream 625305 10913714 ~ 11140925 (-)
si:ch211-127i16.2 LOC103374795,LOC101469412,LOC102289489,LOC100706625,LOC102789715 coding downstream 941502 10772857 ~ 10824728 (-)
gsna gsn coding downstream 1539849 10201066 ~ 10226381 (-)
barhl1b barhl1,LOC100712077,LOC102792687 coding downstream 1616227 10143070 ~ 10150003 (-)
LOC120544994 LOC103357302 coding upstream 286175 12052635 ~ 12053579 (-)
LOC120544995 LOC103357302,LOC104927697 coding upstream 288224 12054684 ~ 12056612 (-)
prkab1a prkab1,LOC103357303 coding upstream 291271 12057731 ~ 12068419 (-)
phf24 phf24 coding upstream 311118 12077578 ~ 12114065 (-)
pigo pigo coding upstream 395833 12162293 ~ 12173384 (-)
G174335 NA non-coding downstream 19810 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 105368 11660525 ~ 11660862 (-)
G174325 NA non-coding downstream 106406 11659436 ~ 11659824 (-)
G174324 NA non-coding downstream 144570 11621447 ~ 11621660 (-)
G174309 NA non-coding downstream 586721 11177513 ~ 11179509 (-)
G174403 unc13b,LOC102798935 non-coding upstream 488358 12254818 ~ 12255275 (-)
G174430 NA non-coding upstream 520954 12287414 ~ 12342288 (-)
G174443 lpar1 non-coding upstream 642864 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 799242 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 860747 12627207 ~ 12627427 (-)
LOC120545042 NA other downstream 601736 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1370486 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 1657941 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 1863223 9861001 ~ 9903007 (-)
G174120 NA other downstream 1922731 9842812 ~ 9843499 (-)
G174439 NA other upstream 590468 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 624095 12390555 ~ 12391484 (-)
tmem267 tmem267 other upstream 864765 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 879826 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1674820 13441280 ~ 13444079 (-)

Expression



Co-expression Network