G174442 (lpar1)


Basic Information

Item Value
gene id G174442
gene name lpar1
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12390555 ~ 12391484 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU236126
AACACTACCACCACGGTTTTCAGCAGAGACATCATGGTATCTCTGTTGCGTCGTGGTCCAGAGCTGTGCCGCGACATCCTCATGGTCCTCTGTCGCACATAGACAAAGATGTGGGCATATAGCGTCACCATGACAACAAAAGTCACTAGGTTAAACACCGCCCAGAAGATCAGGTAGGAGTCGCTGTAAAGCGGCGCCATGTTGGAGCAAGACTTAATACTACAGATACAGTTCCAGCCCACGCTGGGGATGGCCCCCATGACAATGGACAAGGTCCAGATTATGAcaatcaccaccaccacacgGCGGTTACTCATGCGCGTGTGTAGCTGCATGCGGAACACGGTGATGTGGCGCTCGATGGCGATGGCGAGCAGGTTGGCCACAGACGCCGTCAGGCTGGTATCGATCAAGCCCTGGCGCAGCAGCCACGTGGAAACAGTCAGACGCCTCGTGTTGGGCCCCGTGTTGAACATCAAGTAGAAGTAGGCCAGTCCAGCGAAGAAGTCAGCAGCTGCCAGGTTGGCCATCAGGTAGTAGATGGGGAAGTGGAATCTCCTGTTGACGTAGATGGCGACCATCACCAGAAGGTTGGCGAGCATGATGAAGATGCACACGGTGATGCCCAGGCCCATCACCAGCCTGCTGACGGTGTCCCAGTCAGTAGCAAGGTACTTGCCACTGCGGTTGTAGAAGAAGGCGATGGTCTCGTTGTAGTAACACTGTTCCTCATCCATGGTGGCAGCGGTGCTTTCTGAAAGGAGAAAATATTCGAAATGTAAAGAACAATTGAGCAATTTTTGTGAAGGTTGTTACACTTGTCATTGGAAAGGTGATGCTCTAAGCAGAGCAGTGTTCCCCCTGTAATCTGTTGGTATATGTAGAATACACATGGGGCCATTATATGCCTAAAAGCATACTTTAACTACC

Function

symbol description
lpar1 Enables lysophosphatidic acid receptor activity. Acts upstream of or within cartilage development; hemangioblast cell differentiation; and vasculature development. Predicted to be located in cell surface; endosome; and membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including cardiovascular system; mesoderm; musculature system; nervous system; and pleuroperitoneal region. Orthologous to human LPAR1 (lysophosphatidic acid receptor 1).

NR:

description
PREDICTED: lysophosphatidic acid receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236126 True 930 TUCP 0.52 1 12390555 12391484

Neighbor

gene id symbol gene type direction distance location
stbd1 NA coding downstream 71760 12312236 ~ 12318795 (-)
LOC120546050 stoml2 coding downstream 206072 12175383 ~ 12184483 (-)
pigo pigo coding downstream 217171 12162293 ~ 12173384 (-)
phf24 phf24 coding downstream 276490 12077578 ~ 12114065 (-)
prkab1a prkab1,LOC103357303 coding downstream 322136 12057731 ~ 12068419 (-)
musk musk coding upstream 31350 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 98767 12490251 ~ 12497952 (-)
galt galt,LOC102780609 coding upstream 963704 13355188 ~ 13386974 (-)
hdhd2 hdhd2 coding upstream 1040125 13431609 ~ 13439708 (-)
skor2 skor2 coding upstream 1053222 13444706 ~ 13457895 (-)
G174430 NA non-coding downstream 48267 12287414 ~ 12342288 (-)
G174403 unc13b,LOC102798935 non-coding downstream 135280 12254818 ~ 12255275 (-)
G174341 NA non-coding downstream 624095 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 644135 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 729693 11660525 ~ 11660862 (-)
G174443 lpar1 non-coding upstream 17840 12409324 ~ 12416934 (-)
G174481 NA non-coding upstream 174218 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 235723 12627207 ~ 12627427 (-)
G174500 NA non-coding upstream 588342 12979826 ~ 12980285 (-)
G174501 NA non-coding upstream 620700 13012184 ~ 13012817 (-)
G174439 NA other downstream 32665 12356928 ~ 12357890 (-)
LOC120545042 NA other downstream 1226061 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 1994811 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 2282266 10097251 ~ 10108289 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 2487548 9861001 ~ 9903007 (-)
tmem267 tmem267 other upstream 239741 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 254802 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1049796 13441280 ~ 13444079 (-)
smad2 smad2,LOC102778427 other upstream 1192133 13583617 ~ 13606140 (-)
G174799 dusp4,LOC103390320,LOC107396907,LOC107092021,LOC103473566,LOC102218109 other upstream 2088978 14480462 ~ 14483417 (-)

Expression


Co-expression Network