G174443 (lpar1)


Basic Information

Item Value
gene id G174443
gene name lpar1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 12409324 ~ 12416934 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU236127
aaaacaaaaaaaaaaaaaaaaaaaaaaaaccaaaaaaataccCTACTACTGTCTGCTACTGTCAATGAATTAAGTGTCATTACAACTCTTTTCCAATATTTATTCCAGAAAAGCCttaatttcacattttaaaaaccaCACCGACACAAGAATTCAGACTTTTctcatgtttttattgttgctgGGATATCAACACTATGACTCTGGGTGGACATTCATCGATATTGGCCCGTACAGTATAGATAGTATGGAAATCACATTCACAGGATGTCTGTGTCACAATTACTTTCTTACAAACTACTGGTACATTGGTTGTTAAATCTGAGGCTTGGCAACATTTTCCTCCAAAACATTTCTTAAAGCATTGTTTCACTTTGGAAGAACAAACTGTTTCAGAGCTACAGTTAGGACGATCAGACATTACTCCTAATTATGGACATATAATTATTCTATGTATAAACTTTGGGATGAATGGTTTTTGGTATTAACATGACAACATTTCTAAAGTGCAACACACACCGCTTGTGTCGTGTAATGTCAATTGGCGAACATTGGATGCACTATTCAGACAAAAGAAGAAGCAGTCAGGGTATGATGGCCGTGATGTGCTAATCTGAGGTGATAATGTGATAAAACGGTTGTTTTTTTCAGGAAAGTTTACGCATCTTAAAGCTGGGAAAGGAACATTGGCGCATCCTGACATGCATAATAGCATGTGGacttacattaaaaaaaaacaatgggtgCGAGTGTTTTGACATACCGCCAGTGCGTGTTGCTCTTAAgaatgatttattttgtctccttgttaaacaaaaagactcAATTTAGATCTCAGTTAGTGGCCCCACATCAGATTATTTGAACTTGTTTAGACCTCAGTTTAAATCATGAAATCAGatctctattttattttattttttcttaaatcATATTCAAAACCAAATTTGTATTTGTGAGCGCTTACTTATTTAACCTCTTTTGCGGCTGTGTTGTGTATCAAACATGCAAAAATTAAATATCGCTCTAACACTGACATTAATCTTTGTTGTACTTTACGGCCATTGTAAAACGACGGTGTtagccacacacacgcacacaaaaaacagaaaaacaaacttaaAGTGTAGGTTAACACCTTCTGAAGATCTAGTTTTGGCTGACCTCCATTGGTCTAACTTCTCTccttgctgcagtgatgtacAAGTGTACTCCAGgacactgtgacatcactgttgggtgTGGTTACAGGTGCAACAAAGCACACTTCCAAACAGAGAGGGCGGTCAAACACTGCTTTTCAACCTGGTGTTAAGTGACTCTTTAAGGAGGAGGACTGGAAGGCACTGCACACTTTGGCCGCATTTCCACCTGGTATCAAAATCTGATCCGAGGGATCCGATCACAAGTGTTCAGCTCTAAGTACGTGTGTTCCCACATGAGTCCTGAGTGaccacttgtgatcggatctcACTTTCCCGCGCTACatgcaaataaatacataaatcatTTCGGGTTGCACATAGTAGGCTGGTTGTTACTCTCACAAAAATCCTACATTAGAAACGTGCGATGACTGATAAAAAGGCGCTGCCTACAGTCTGTTAGGCAGGAGAGAAAGatgttttaaaaaggtatttttaCGTTTCATGTTCGCTTATAGGAGTCGTGTTAAGTTAATGCTGATAAAGACCAAACATTTccagattttgctgcttcataataaaagctttaaaaaaacctaaataaCGAAGAACTGTTGTTGTGAAGAATTTATTGTTGTGaagaatttaatttattttcaattaCCGTTTTTCTCATTCTAACAGGAGACATACTTTGAATGATTACGTAGTTCTGCTGACTGTTAAGTAGGCGGTCCCTAATGTGGCCCAGGACAAATGTGCATGCACACTGCTAAAAGAATGTGGTCACAGCTGGCCTAAACCATCTCCGAATGTGGTCTGAGTAATTGGACCTCAATGCATCTTCAATGCGTCCTGGGTGCATTTACAGCTGTACATAGAGTTGTCCACTAGTGATCGGATCACTCAGATTggattttaataccaggtgGAAATGGGGTCATATCTAGTTCTGGGTCACAAATGAGTTAATATAGTTTACAGGCAATGCATTAATTAGGGTCACAATACAAAAGAGCTCATGACATAAAAACCATAAGCAAAATCCTACAGTACATTTGGACAGATTATACACACTTAAatttacaaacacaaaaaatcttTCCCTTTGGTGATTAACTttgaataatatattttatatacatacatactgtacacataaACTTACAATGGTGTGCAAAGAGTGACACACTGGTAAACAGAGACATACAAAGACAGAAAGTTTAGTTGGTTTGCTATATAACCTGAATCAATACTTTGTTAGAAAAATTGTTACAGTGAATGTCAAATGTGGAGGGTTGGGTCCAGAGCCGTAGGCTGACAAAGTTTGGTCAATGAAACAATAAAtggcactgctgctgctgccactaCTCTTGCAAGGCCTGTTGTGAAGTTTACAGAAGTTAAGGATGGACAAATCAAAGAATGAAGAATACAAATATCTAAGGTTGTTTCCTTAGAATTCAGACTTTTCTcaaattgtgtatttttttttgtaaaggcaCAATCTGGAAATTTAAAAGCAAAAACTGTAACGGTAATCTAGATGGGGAAAAGACCATAAGAAATCCACTCCCCACTCTAAACAGCTAgggcacactgtaaaaaataaatccaaaaacTGGATAAAAGAACTTATGTTGCCTCATAAACAGGGAAACATTTTGGCCAACTTCGACAGGCAACAGTACCAGCTGACTTCATTTCAGTACTGCAGCTAAAATCCCTGACAAACATCTGGCTTCCTGGAAAACATTTGACTGTGTTTTTGGCCGTGGTTCTCACTTTTCTGTCAGCTTGTTTGGAGTGTTGTCTATGTGTTTTGGCCAAAATGTGTTTTGATTCAAGTCACGACAAAACGTTCAGCTGGTGATTTTTAACAATGTACGTCATAGCATCACCAGGCGGACTATTATTTTGGCTTTGAGTCTCGAGTTAATAGCAGAAGGTGGTGGAGTGCACTTGTGGAAATAAGATATCAACATTCAACACTGCATTGGCTCAACTCTGCTTGACTTTCGAGTATTATCATAAGAGTAAACTGTGATAGGTCATTGTTGTCGGTACCCCTTTAAAAAGAGTAGACCGTCACAAATGCCTAATGATACATTCCATTAAGTTGGTATAGTAAAGATTAACATTATCAGAACCCCACTATATGCCTGACACCAGGTTTCGCATGAGACAATCTGTAATATGTGCCAACCTAATTCACTGGGAAGCTTTAAACACATGACGACGTGATCTCCGTTCAAGACACCATGCCATGCGGGGGCAcgatgagggagggagggagggagggagggaggcagagatATGCAAAACATTTGAATTATTCTTATTTCCAGCCTTTGCAAATAAagacacaacaaaaaacattatcaTCATAACCCCAACCATCTCATATAATGACATAAACACAACATCATATATTTTGGATGGACATCTGTAATACTTCATATCACCAGTAACACTGCAATAAAAAGTGTATATGACATTTAGTTTCTTATTAATACGAAAGATATGTTCATTCTTTCCTTGGAGTGTTAAAAACCGAGCTGACTTATCAGGCTGTGGCACTGTAGGAGTTAACTTCAACTTTTTTCCAAATACTGCCATAAAAGATGCACGTTTAAGATTTTGGGGATTTTAAGCTAAGATTTATCAGAGGCTAAGCTGAAATGGAGCTcataagtagggctgggcatgatatgagactagatatcatcttcatttttggatattgtaatgtCATTATTTGAGTAAGTAATAtgataagtgttgtcttttcctggttttaaaggctgcattacagtaaagtgaaggtcatttctgaacttaccagactgttctagctgttctattatttgcctttacccattaATTactatatccacattactgatgattatttatcacaaatctcattgtgtaaatatttttgggaaagcaccaattgtcaacccaaCAATGTCGTCGCAATAtcaatattgaggtatttggtttaaaaaatattgtgatctTTGATTTTCGTGAAATCGCCCTGCCCTACTCATAAGCTAAGCATTGCTACAGCAGCGATTGGTCCAGACCAGAAAATTTTGGAGAAATAAGGGTAATACAATGAAATCAGTGGATATGCTCCTGGGGACCAAGTAAATCTGAGCTATGCATTAGCTTTTGGTAAACTCTGACACAATTTTGCACCACTGACAAACTTGTGACATAAACACAACATCATATATTTTGGATGGACATTTGTAATACTGCAAACTGGATTTTTAGTTGCCAAGCTAGCGGTGTGGCTCTACAGATGGCAATTCCATTGGTCGGTTCAGTCTATGGGTCACTCCACCTCTGTGGTCCAGACTAAAATGTAACTATTTAAGAGCCCCTATTACACTcattttcagcatcatattGGGGTCTGCTAGAGTAgttttacatgctttgatgttctaaaaaacatgtttctcatactgcccattgctgcagctcctctgcctgaaacactctgggccctatcttgcacccggcgcagtgcgacgcaaagcccgacgcaaagctcgacgcaagtgtcttcgctattttaagaccgtccagagtccacgtcgtttaaatagcaaatacacctgcgcccatctgtgagcccatgggtgtgctggccttacagggaggtgtgttcaggtgcatgcttggcgtattgctatcttgaggtaacggaaagtgatcgcgccattgaccaacaaaaacctggtctaaagtcaatagcgcagcatttcttttttattttaacagagaaTTACTAAAATGCatctaggctcgtgcacagcgagcacactatgcttgttagaCACGcagggacgcgcagcagcacacaaacgcaaaagattacaaatgaaaatattactgttcaaatccgccatcataatagcaatgcgccaattgacaaatgcgcctggcttttaaagggaattgGAGatgactctgattggtttattgcatgttccGACCAAAACACActtatgaattaatgaagacactaagtacaacccttttgaaccatgctcCCATCGcatggacccttttttccaccgtcaaaccagcaaaagtggatttggacacgccctaaacgcacctgcgcgcttagattgttaaaatagggccccatgTCTGACTTCTCTGCCCGGCTTTCTGAAAAGCCaggtcagctggcccactctgttgtgattggtcaaccaaattcaaacaatCCACTGCGAACCCCTGGGTGGGCTGTGgttgctcaggcagcacctatAGGCAGCACATGTGAAAAACCGGGCTGACCTTCGCAATCAGTGATTTTTGCAATCACTAATTGAAGAATTTTAAACAGGAATGTTGGCGAGGTGTTtcaggcagttgagaaaaagtctgtgggagagaaagctccattttgagtgatgtttttttttttgtactttatacatctatcacatacacacaaaactatAAAACACACTTAAAGATGGGAAAAATCCCCCAAAACATAAAAGGGGCTCTTAAAATAGAATGCTATGACATTTGCAGGTCAGTGTTTGCAGTCAAAACTGTTACTGCTGGCAAAATTGCATTTGTAAACTACAAATTTAGGCAAGCATTCATTAACATCTATTTTATCTTCATGTGCTATGAAGACAGAACGGCCTATCTTGTCACCTCTTACAGTGAGGGCAATTTAACACTGATTATAAGTTCCACATTCACTTACCCCTAACCCCTTTTCCTCAGTCGGCCTCATGGTTAAAACCATGAGAGGCAGAAAGCTCAGCACATTTCATCTCATGACCTGAAGTCTGTTAACGCTCACCAGAAATGACCTTCACCTTGTCTCCACATAACACTGTGGCACAGAGCCTGTTCTAAAACCGcaaacatcctcctcctctttttggTAAGATCCCTAGAACAACTTGTCTCTTAATTCCTTAGAGGGAATAAACAACAGATCCTGGACCCTTCATGTATTTACGTTGGATGGAAGAAAGATACTGGAACTGGAGTAGAACATCAACAGAATAATGAGTCTTAAGCTTGTAAGGTCACTTTAAAAGATGAATGATGGATCTGCTGCGGTAATGAATAGTGGCTGCGGTTACTTAAACAATCCATAATGGGTACAACAGCATTTTTTGGTAAGTCGCTAAACATGTCAAACATGtcagtatttatatatttgtttattatatAAGCATCAGCAGCATGTCCCATAAAAGTTTCAATATGACGTCTATATTTAAGAAAAGATAAAACCCTGGAAAAAATACTATCAAGAAAATCAGCCTCAAGTCTCCACGAGCTCATATTAAAGTTAAAGCTGCTGGAGATAACTTCTATTAACATTCAGTTACACGTATGAGCATAAATCAGCATGTGTTTCCTCCCAAAacaaggagaaagaaagaatagtGTTCTAAATGTGCGTCCAAAATGCGTCCTCAAATGGATGTGAAGGAAACTCACGCTGTCTGTATGTGACGGGTGCGTATGATGTTATGTGACCTTTCTTAAGAATTGGGGATTGAGGGGGGGGAAAAGTCTGAAACCCACGACTACAGGATACAAAGTTAGAGAAGACTACTGGCATTACCTTCATTTCACAGATTACTTTTAAATAGTTCATATCAGCGTTCTCCATAACACATTTCAAACAaatagaaaataatcaacaactAAACAAAAATACTAACAGCCTATCAGAGTCCTTGAACATCGGACTCCACCTCCCCGTTCTTCCTCCACACGGCGATAAAAGTCTTGTCGTCTTTCTTCATAGTCACATCCTGTTCTCACGCAGCTCTACTCTGTCTACCTAATCTTCATTCTTCAATTTCTTACGTTTCTGTCTTTCGGTCGTGTCGTGTTCGCGGTCCCTCTCCACCTTTTCCTTGCTGCCAATTACCTCCTTTCAGTCAGTATCTTCCAAAACAGACCAACCCCACCAAGCAGTTGAATTAATGGCCGCAATCCCcagccctctttttttttttcttttttttttataccactGAGTGTTCGTtgttgtggtggtgggggtggtggtggtggtgttgttgttgtgtaccGCCGCTAAGCACCGTGTGGTTGATGGACGACGCCGACCTGTCAGATCCCTCCGCCACCGTCCCGTTGACGTTCTCCTGCCGCTGACAGCACAGGATCTGCCTGAAGGTGGCGCTCATCTCCTTGTCGCGGTAGGAGTAGATGATGGGGTTCATGGCCGAGTTGAACTCGGCGAGAAGCAGGAAGAACTTTTCATAGGTGAGGACGTTGCAGTTGGCGCAGAAGACGTCGAGGAGGAGGATGACCAGGCCGGGGGTCCAGCAGATGATGAACGCACCTTGAGGAGACACATAGCAGATGGACAAAATATTGAAATTGGTgctaaggaaataaaaaaaaaaactatacaggaattaaaaaa

Function

symbol description
lpar1 Enables lysophosphatidic acid receptor activity. Acts upstream of or within cartilage development; hemangioblast cell differentiation; and vasculature development. Predicted to be located in cell surface; endosome; and membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including cardiovascular system; mesoderm; musculature system; nervous system; and pleuroperitoneal region. Orthologous to human LPAR1 (lysophosphatidic acid receptor 1).

NR:

description
PREDICTED: lysophosphatidic acid receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236127 True 7611 lncRNA 0.40 1 12409324 12416934

Neighbor

gene id symbol gene type direction distance location
stbd1 NA coding downstream 90529 12312236 ~ 12318795 (-)
LOC120546050 stoml2 coding downstream 224841 12175383 ~ 12184483 (-)
pigo pigo coding downstream 235940 12162293 ~ 12173384 (-)
phf24 phf24 coding downstream 295259 12077578 ~ 12114065 (-)
prkab1a prkab1,LOC103357303 coding downstream 340905 12057731 ~ 12068419 (-)
musk musk coding upstream 5900 12422834 ~ 12467165 (-)
si:busm1-57f23.1 NA coding upstream 73317 12490251 ~ 12497952 (-)
galt galt,LOC102780609 coding upstream 938254 13355188 ~ 13386974 (-)
hdhd2 hdhd2 coding upstream 1014675 13431609 ~ 13439708 (-)
skor2 skor2 coding upstream 1027772 13444706 ~ 13457895 (-)
G174430 NA non-coding downstream 67036 12287414 ~ 12342288 (-)
G174403 unc13b,LOC102798935 non-coding downstream 154049 12254818 ~ 12255275 (-)
G174341 NA non-coding downstream 642864 11766230 ~ 11766460 (-)
G174335 NA non-coding downstream 662904 11746071 ~ 11746420 (-)
G174327 NA non-coding downstream 748462 11660525 ~ 11660862 (-)
G174481 NA non-coding upstream 148768 12565702 ~ 12569571 (-)
G174482 NA non-coding upstream 210273 12627207 ~ 12627427 (-)
G174500 NA non-coding upstream 562892 12979826 ~ 12980285 (-)
G174501 NA non-coding upstream 595250 13012184 ~ 13012817 (-)
G174507 NA non-coding upstream 646810 13063744 ~ 13063943 (-)
G174442 lpar1 other downstream 17840 12390555 ~ 12391484 (-)
G174439 NA other downstream 51434 12356928 ~ 12357890 (-)
LOC120545042 NA other downstream 1244830 11153767 ~ 11164494 (-)
adra1ab LOC104947653,LOC100705829 other downstream 2013580 10378956 ~ 10395744 (-)
gtf3c4 gtf3c4,LOC102793669 other downstream 2301035 10097251 ~ 10108289 (-)
tmem267 tmem267 other upstream 214291 12631225 ~ 12637494 (-)
cntfr cntfr,LOC108232720,LOC103473535 other upstream 229352 12646286 ~ 12918560 (-)
ier3ip1 ier3ip1,LOC106633120,LOC102779563,LOC104954869 other upstream 1024346 13441280 ~ 13444079 (-)
smad2 smad2,LOC102778427 other upstream 1166683 13583617 ~ 13606140 (-)
G174799 dusp4,LOC103390320,LOC107396907,LOC107092021,LOC103473566,LOC102218109 other upstream 2063528 14480462 ~ 14483417 (-)

Expression


Co-expression Network