ier3ip1 (ier3ip1,LOC106633120,LOC102779563,LOC104954869)


Basic Information

Item Value
gene id ier3ip1
gene name ier3ip1,LOC106633120,LOC102779563,LOC104954869
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 13441280 ~ 13444079 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU236275
gaagaagaagacgaagacgaagacgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagttgccAGCATGGCGTTTACGTTGTACTCTCTCATCCAGACTGCCATTCTATGCACTAATGCAATCGCTGTGTTGCATGAAGAAAGGTTTCTAAGCAAGTTCGGCTGGGGTGTTGACCACGGAGTTGGAGGTTTTGGGGATGATCCAGGAATCAAAGCCCAGATTCTCACCCTCATTCGCTCGGTCCGGACTGTCATGAGAGTGCCTTTGATAATAGTGAATTCGGCCTGCATCGTCCTGTTGTTACTGTTTGGTTGACAGCGGGGACACCCGAGTGCCACTGTGAAATGAAGCCAGAGGACTAGACATGTGCCAAGGaaaaaccacaaacacacccagTAATATCCGTCATTCAGAGACTTCTGCCTTTGCCAGTCATCCGCAGGGGGGAGATGTCTGGCATGGAAAGAGAGAAACTTAAAAATCACCATGCAGCTGCTCGCATCCAAAGAGAAGGAGAGTTGACCCGTCACTCGGTTGAAAGTATGGCTGGTGTGGACTTAACACCAGGACTAACACTAACCTAACCTGCGTAACACTACACTTGATGGTGATTCTGTTATCATCCAAAAGCGTTGTGCTGTGCTTGCGTTTTTGTCCTCATTTTCACACATTGAGACACAAGGATTTGATGATATGTGTCAGTATTATCGCGTTACAAATGAGAAACTTGTTAAAGAAGTGTTGTCAGCAGTAGGGCTGGACAATATGGAAGTATTTATTACATGCTATTACACTTCTGTCCAGGGGTATAGCtaccttttttatatatacatttgGGAGTTTCCTAAACCaggtaaaaaaatacacaatgtttattttttatttttttaaggctgTTAATTTGTATTTTAGACTTCAGTGTGATTGTGTATTATTTTGTCCTGAAATGTACAAGGATATACTCTAAAACAACATTGCGACCATTGGGTAGGGAAATGACATTTACGGAAAATGTAATCAACCAGTTCCATAACTGCAGTTTAATATAATGAACAATGTCTTCTGTACCAAAACAGCTAAATTGCTAAAATTCTTCACTTTAAACTGGTCAGTAAGCCATACACACCTGGGATTGGGTCAGATGTGTGTAATCTAGACTTTAAGCAATATTGCTAAACGGCTCAAAACAATGCACCTTTTTACCGTTTACACATCAATACCCTCTCAATGCCACAAACATCACTGTAATG
>XM_039780693.1
TGGTGCtgctggaagaagaagaagacgaagacgaagacgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagttgccAGCATGGCGTTTACGTTGTACTCTCTCATCCAGACTGCCATTCTATGCACTAATGCAATCGCTGTGTTGCATGAAGAAAGGTTTCTAAGCAAGTTCGGCTGGGGTGTTGACCACGGAGTTGGAGGTTTTGGGGATGATCCAGGAATCAAAGCCCAGATTCTCACCCTCATTCGCTCGGTCCGGACTGTCATGAGAGTGCCTTTGATAATAGTGAATTCGGCCTGCATCGTCCTGTTGTTACTGTTTGGTTGACAGCGGGGACACCCGAGTGCCACTGTGAAATGAAGCCAGAGGACTAGACATGTGCCAAGGaaaaaccacaaacacacccagTAATATCCGTCATTCAGAGACTTCTGCCTTTGCCAGTCATCCGCAGGGGGGAGATGTCTGGCATGGAAAGAGAGAAACTTAAAAATCACCATGCAGCTGCTCGCATCCAAAGAGAAGGAGAGTTGACCCGTCACTCGGTTGAAAGTATGGCTGGTGTGGACTTAACACCAGGACTAACACTAACCTAACCTGCGTAACACTACACTTGATGGTGATTCTGTTATCATCCAAAAGCGTTGTGCTGTGCTTGCGTTTTTGTCCTCATTTTCACACATTGAGACACAAGGATTTGATGATATGTGTCAGTATTATCGCGTTACAAATGAGAAACTTGTTAAAGAAGTGTTGTCAGCAGTAGGGCTGGACAATATGGAAGTATTTATTACATGCTATTACACTTCTGTCCAGGGGTATAGCtaccttttttatatatacatttgGGAGTTTCCTAAACCaggtaaaaaaatacacaatgtttattttttatttttttaaggctgTTAATTTGTATTTTAGACTTCAGTGTGATTGTGTATTATTTTGTCCTGAAATGTACAAGGATATACTCTAAAACAACATTGCGACCATTGGGTAGGGAAATGACATTTACGGAAAATGTAATCAACCAGTTCCATAACTGCAGTTTAATATAATGAACAATGTCTTCTGTACCAAAACAGCTAAATTGCTAAAATTCTTCACTTTAAACTGGTCAGTAAGCCATACACACCTGGGATTGGGTCAGATGTGTGTAATCTAGACTTTAAGCAATATTGCTAAACGGCTCAAAACAATGCACCTTTTTACCGTTTACACATCAATACCCTCTCAATGCCACAAACATCACTGTAATGGTATTGGGATGGTTTGTTGTcttgaaataaatgtattagTCAATAATA

Function

symbol description
ier3ip1 Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; organ growth; and positive regulation of secretion by cell. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in COPII-coated ER to Golgi transport vesicle and endoplasmic reticulum membrane. Predicted to be integral component of Golgi membrane. Orthologous to human IER3IP1 (immediate early response 3 interacting protein 1).

NR:

description
PREDICTED: muscle M-line assembly protein unc-89-like

GO: NA

KEGG:

id description
K22939 IER3IP1, YOS1; immediate early response 3-interacting protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU236275 False 1271 lncRNA 0.41 3 13441328 13444065
XM_039780693.1 True 1333 mRNA 0.41 3 13441280 13444079

Neighbor

gene id symbol gene type direction distance location
hdhd2 hdhd2 coding downstream 1572 13431609 ~ 13439708 (-)
galt galt,LOC102780609 coding downstream 54306 13355188 ~ 13386974 (-)
si:busm1-57f23.1 NA coding downstream 943328 12490251 ~ 12497952 (-)
musk musk coding downstream 974115 12422834 ~ 12467165 (-)
stbd1 NA coding downstream 1122485 12312236 ~ 12318795 (-)
skor2 skor2 coding upstream 627 13444706 ~ 13457895 (-)
LOC120545744 hspb9 coding upstream 169201 13613280 ~ 13614293 (-)
LOC120545595 epha5,LOC102777475,LOC102204755,LOC102304993 coding upstream 188022 13632101 ~ 13706928 (-)
plppr1 plppr1 coding upstream 515223 13959302 ~ 14020451 (-)
snx30 snx30 coding upstream 717583 14161662 ~ 14179566 (-)
G174546 NA non-coding downstream 13197 13427855 ~ 13428083 (-)
G174537 NA non-coding downstream 49346 13390053 ~ 13391934 (-)
G174536 NA non-coding downstream 51310 13389585 ~ 13389970 (-)
G174512 NA non-coding downstream 164212 13271456 ~ 13277068 (-)
LOC120546049 NA non-coding downstream 307268 13117480 ~ 13134012 (-)
G174563 NA non-coding upstream 137311 13581390 ~ 13582508 (-)
G174565 NA non-coding upstream 153021 13597100 ~ 13597358 (-)
G174568 NA non-coding upstream 155273 13599352 ~ 13599635 (-)
G174592 NA non-coding upstream 410236 13854315 ~ 13854727 (-)
G174590 NA non-coding upstream 415873 13859952 ~ 13863997 (-)
cntfr cntfr,LOC108232720,LOC103473535 other downstream 522720 12646286 ~ 12918560 (-)
tmem267 tmem267 other downstream 803786 12631225 ~ 12637494 (-)
G174442 lpar1 other downstream 1049796 12390555 ~ 12391484 (-)
G174439 NA other downstream 1083390 12356928 ~ 12357890 (-)
LOC120545042 NA other downstream 2276786 11153767 ~ 11164494 (-)
smad2 smad2,LOC102778427 other upstream 139538 13583617 ~ 13606140 (-)
G174799 dusp4,LOC103390320,LOC107396907,LOC107092021,LOC103473566,LOC102218109 other upstream 1036383 14480462 ~ 14483417 (-)
G174827 NA other upstream 1140620 14584699 ~ 14589020 (-)
G175000 arpc3 other upstream 2206658 15650737 ~ 15654486 (-)
LOC120545627 LOC102205042,LOC104934790,LOC102798225,LOC102289738,LOC100705220,LOC101481478 other upstream 2809768 16253847 ~ 16298146 (-)

Expression


Co-expression Network