G175640 (LOC102204295,LOC100701817,LOC103369925,LOC106514495,LOC101480226)


Basic Information

Item Value
gene id G175640
gene name LOC102204295,LOC100701817,LOC103369925,LOC106514495,LOC101480226
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18067132 ~ 18095523 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU237740
CTGTCAATCACTTTGCAAGATTGGATGTCTCATGTAAACAGTAAGTCTGTTTCTGAAGATGAAACGGCTTCATGAAAATACTCAAGCAAATTTAGTATAAATACTGGattctttatttaaatattgtacatattttaaaacatatttacataaaaGTATACCTGCATTGTTACACTGTAGACATAGTTGTATCtttcatacacacaaacattgcTTGCTGAAAAGAGGACAATCATACCATACAGACTGCAGAAGCACCTTTGAGAACAATTTCACAGGAGAGAAAGATGGGGGCAGACTGTCATTTACATCAAACACTGGGCAACATGACCGAGACGAGACAAGCTTGCAATGACAGGAAAGGCCTCTTTGTTACAGGTCTGGCTATTTGTTAAGGCTGAAATTGTGCTCACCCTCATACTGCAAGTTCACAGCATCATTACCTATCTCACCACCCCTCCTTCTGCATATGGGTAACGTAACATGTGACTGTCACACATAGGGCTATCTTTGAAGACAAGTTCAGAACCTTTATATACCACCAAACAAGAACAGATGACAACTGGGTGATACTGACTTTATAAAATTCTGCTAATAGCCGAGACAGAAATCATGCTGAAAAACAGTGCAGACAGTAGGACaaataatattcaaataatggTGTCCATTAGGTGTATGAGGAAGAAACACCATGCTATCGTAACAGCAGGGCTTACAGAGAAGTGCCCTAatcatgtgtttttatatgGCTTTCCTTCTTTGGTTTCATAAAATCGGTCGTATACTGTGTTGCAACCAGTCACATATAACTTAAACCAAGAATATAATACAGCTTTTGCTTTGATAGAACAACTTTAGGCATAGAAAAGACATTTTAATGTCCCTCTGAACATTTCCACCAAAACACCTGGCCATCACACAAGATTCAGAGCACAAGCGATTTACAGTATTGCTGTATGATGTTTCTAACAACGTGTTGTGTATGACATACACAGACAGTCTTTGGTGCACCTGCTTTAAACTGTAAAGACATTGTCCAAACCACTTGGATGAGCTGTTAGACAAAAGGACAGACTATCAATGAGTAGAACAGTATTATCAaacacacacattacaatcaTGGAGACTATGTTCATATAAATCATGTCAAGTCATATACAGACATCTGagaagcagcaaacaaatgtAAAGGGAAATAAGGAACTGAGAaatcaaaatacacacacacacacacacacacattctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtttaaagtATGGTGTTTAAAGTATACTTACCCCTTACATTCAGACCATTGTCACACGCAAACTGTGCAAAAGGGGACATATAATTGGGGTCGTAGGCAAGGTCGTGAGCTTGCCTTGCAATACTCTGTGCAGTCTGCAGGATGCTGTCATAGTTGGTAGTCTGAAATTATCGAAAGTAAACAGCATTACATTTGAAAGACGTAAAAATAATTTGCACCTATGTTTACATACAACTGGCTACGGTATGTGTAACACCTTGAGTTTTTTGAGCTCCTGAAGAATCATGTAGTCTGGCATGTTGTCAAACAGGCCGTCGGTTGCCGTCAAGATGATGTCACCGAGCTGCACGTCAAAGGAGGAGCTGTCAGCTGCTTCAGGACTGTCACTGAGCACCACCCCTTCAGCTCCAGGAGGAGCGATTGACAGTTGGAAGGGCGTGTTAAAATAGTGCTGTTGCTCATCTGAGCGATGAACCACCTCTCCTCCCCGAACCACCAGGAAACCTGAGTCACCGAGGTTACACGTGTGCAGCCGGTGACTCCGTCGATCCAGAACCACAATACAGGCTGTGCTGCTCCCTACAAAATGAGGAGAGCAAGTCAACAATAAGGTTATGGATAGACTTGACAAGCGAACAGTGAAAAAGAAATGGAGTTCAGTTGTGAAAATGCAAACGTATATCTTTTCAAGTTTGGATAGACAGGCAGAAAATAAGCACGGGCTGAATTTGTTTTTCTAGAGGGGTAGAATGCTGTTCAACCAATACATC
>TU237741
CTGTCAATCACTTTGCAAGATTGGATGTCTCATGTAAACAGTAAGTCTGTTTCTGAAGATGAAACGGCTTCATGAAAATACTCAAGCAAATTTAGTATAAATACTGGattctttatttaaatattgtacatattttaaaacatatttacataaaaGTATACCTGCATTGTTACACTGTAGACATAGTTGTATCtttcatacacacaaacattgcTTGCTGAAAAGAGGACAATCATACCATACAGACTGCAGAAGCACCTTTGAGAACAATTTCACAGGAGAGAAAGATGGGGGCAGACTGTCATTTACATCAAACACTGGGCAACATGACCGAGACGAGACAAGCTTGCAATGACAGGAAAGGCCTCTTTGTTACAGGTCTGGCTATTTGTTAAGGCTGAAATTGTGCTCACCCTCATACTGCAAGTTCACAGCATCATTACCTATCTCACCACCCCTCCTTCTGCATATGGGTAACGTAACATGTGACTGTCACACATAGGGCTATCTTTGAAGACAAGTTCAGAACCTTTATATACCACCAAACAAGAACAGATGACAACTGGGTGATACTGACTTTATAAAATTCTGCTAATAGCCGAGACAGAAATCATGCTGAAAAACAGTGCAGACAGTAGGACaaataatattcaaataatggTGTCCATTAGGTGTATGAGGAAGAAACACCATGCTATCGTAACAGCAGGGCTTACAGAGAAGTGCCCTAatcatgtgtttttatatgGCTTTCCTTCTTTGGTTTCATAAAATCGGTCGTATACTGTGTTGCAACCAGTCACATATAACTTAAACCAAGAATATAATACAGCTTTTGCTTTGATAGAACAACTTTAGGCATAGAAAAGACATTTTAATGTCCCTCTGAACATTTCCACCAAAACACCTGGCCATCACACAAGATTCAGAGCACAAGCGATTTACAGTATTGCTGTATGATGTTTCTAACAACGTGTTGTGTATGACATACACAGACAGTCTTTGGTGCACCTGCTTTAAACTGTAAAGACATTGTCCAAACCACTTGGATGAGCTGTTAGACAAAAGGACAGACTATCAATGAGTAGAACAGTATTATCAaacacacacattacaatcaTGGAGACTATGTTCATATAAATCATGTCAAGTCATATACAGACATCTGagaagcagcaaacaaatgtAAAGGGAAATAAGGAACTGAGAaatcaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacttaagatTGTTAAGTAATCAATCACAAATATTTCATGTCAGCAGCCACTCCAAATTCTTacttttaaaactaaataacgttaaaaaaatacatattttcctTTAAACTCATGCCTGACCTATCATTGCAATTGTAAGCATTCCCAGATGCTAGCTTTAGATGTGTGAGATAACAAAtaattaacattaaaaacaccacGCATTCCAATAACCAATTCTCATGTATACTACACTCGCACATTTTTAACATCCTCTCTACCACACAACTGTTGCAGCGATCAATCTCAGCAAAGATCTTCTTGTTCATTTCCGCGAGTGGAAGTGTGGGATTGATAAAGCTCACTTCAAGATTAACATCTAtacaagaaaatatatttatgaCTGCATGTGTACACCATCCACAATAGTAACGAAATTGCTCTTTGCTCCAACAACCAATGAAGAGACAACAGAAAAGCCAAAATGAAGCCCTACAAACACAAAAGTATTTACAACTTATTGGGATGTGTGCACCAACAGATCCTCTAGCCAAGTGACAAAAACGGATTCACCTTCACATGTAAGCTCTAACAAGTGTTATGGTTTCCCTTTACAGGTTCATTGATCTGCACAATTACTAGTCAGCTCTTCGATCGTTTACAGTCCCAAACCCAATTCTTAAATCCCATTCTCTAATAACACCCATCCATTCCCAACATCAGCTTCTTCAGTCAATCTATATGCATTgttcaaacacatttacaacaaGGAACAGACTAAAAACTGGAACAACAGACAGCTAGCTGGGTTCAATAGTCAACTCTATAACTACTCTCCCAAGAATCCAAAACCATGGCATACTCCTCTTATGATATCACGTTTTATACACAAGAGCTACCAGGTTTTAAAGCCCTAAGTCAATCCAAACTGTTTGACTGAAGGCTCTGAACTGTCTCTCAGTCACatcacctatacacacacacacacacacacacacacacata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237740 False 2143 TUCP 0.41 4 18067132 18073061
TU237741 True 2252 lncRNA 0.38 4 18067132 18095523

Neighbor

gene id symbol gene type direction distance location
LOC120545636 NA coding upstream 104627 17955092 ~ 17962505 (+)
ggcx ggcx coding upstream 152450 17908044 ~ 17914682 (+)
fam136a fam136a,LOC102792467 coding upstream 170313 17894989 ~ 17896819 (+)
slc20a1b LOC103372752,LOC104961022 coding upstream 192417 17864272 ~ 17874715 (+)
drg1 drg1 coding upstream 220717 17840135 ~ 17846415 (+)
trim69 LOC103369922,LOC104923159,LOC104948156 coding downstream 7116 18102639 ~ 18106880 (+)
anxa4 anxa4 coding downstream 80597 18176120 ~ 18184887 (+)
LOC120544962 LOC104923128,LOC100702751,LOC101476754,LOC102201716 coding downstream 97651 18193174 ~ 18199694 (+)
ggt5b NA coding downstream 165748 18261271 ~ 18270389 (+)
rnf34b LOC102198247,LOC101472476,LOC102778596,LOC102300128,LOC100691293,LOC108232543 coding downstream 247196 18342719 ~ 18360587 (+)
G175660 NA non-coding upstream 1618 18065221 ~ 18065514 (+)
G175656 NA non-coding upstream 10819 18054460 ~ 18056313 (+)
G175637 LOC103369931,LOC102795461,LOC100696878 non-coding upstream 57892 18007739 ~ 18009240 (+)
G175547 NA non-coding upstream 183301 17876999 ~ 17883831 (+)
G175445 rnf208 non-coding upstream 427801 17631346 ~ 17639331 (+)
G175670 NA non-coding downstream 52019 18147542 ~ 18148547 (+)
G175687 NA non-coding downstream 112251 18207774 ~ 18209059 (+)
G175695 LOC103473718,LOC103148770,LOC106925514,LOC101169050,LOC106514486 non-coding downstream 135510 18231033 ~ 18234162 (+)
G175696 NA non-coding downstream 139713 18235236 ~ 18238947 (+)
G175772 NA non-coding downstream 326006 18421529 ~ 18422678 (+)
lhx6a lhx6,LOC103363386 other upstream 810668 17241997 ~ 17256464 (+)
rbm18 rbm18 other upstream 826753 17223586 ~ 17240379 (+)
LOC120545445 strbp,LOC102791526 other upstream 1074618 16904375 ~ 16992514 (+)
LOC120545594 camkk2,LOC101480815,LOC100704955,LOC102799510,LOC104945421 other upstream 1823043 16220410 ~ 16244089 (+)
snrpd3l snrpd3,LOC105014836 other upstream 1847419 16216949 ~ 16219713 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other downstream 29319 18124842 ~ 18145450 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other downstream 200313 18295836 ~ 18328825 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other downstream 296216 18391739 ~ 18400446 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other downstream 441108 18536631 ~ 18548141 (+)
cabp7b cabp7,LOC104925332 other downstream 539503 18635026 ~ 18651069 (+)

Expression


Co-expression Network