LOC120545364


Basic Information

Item Value
gene id LOC120545364
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18075032 ~ 18080451 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU237773
CAGCTAGAAAGAATCCACCCCGAGCCATAACGGAGccgacagagggagagaaaacaaCGACAACAACACATTATCGCCGAATTATCATCTAAGATCACATACAACATTAGTTCACGGGTCATGATGAGGAAGTTGTGTGAGGTGGCTCTTGTGTCCCTTCTTATTGGGTTTCTACTGAACACTGAATCAACATGGGCtaaaaaaagcagcagcagcagcaagaaaaCATCATCTTCTAGCAACAAGGGTGGGACACAATCAAAACCATCCTCTCAGCCAGGATACCCCCGACAGCCACAGAGTCCCAATCGAAACCCCAATCCTTATCCTCCTGGTGGAAGTTACCCAGGAGCAGGCAACACTAATCCAGGAGGAATTCCCAGACAAAATCCACCAAGTTATCCAGGAGCTGGTAGTAACCCCAACCAGTATCCTGGCAGAGCCAATCCTGCAGGTTATCCAAACCAGAACCCCGCAGGTGGATATCCAGCAGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCACCTAACCAGTACCCTGCTGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCAGGAGGATATCCTAACCAGTACCCAGCTGCAGGAGGCTACCCAGCTGCAGGTGGCTACCCAGCTGCAGGTGGCTACCCAGTCAGAGGAGGAAATACAGGACAGGG
>TU237776
AAAACATCGGCGTTCCTGTTCCGCGCAATGAAGCAGGCATCATCTCCGTAGCACATCCCTTTCTTCAGGATCCCTTTGCGAAAGTCTTTACCGAAGCCATAACTGGCGGTGATCAGGCTGTAGTCCCGACCGTCCGTCTGAGAGAGTCCGCCAAGGACAGCCCTGGCTACCAGTCTTCCATAAGACAGTACGGATAACATCCCCTAGCAAGCAGCTACCCCGTCTTGTGAGCACGCACACGCTGTCTCCCCTTTCTCTACCCGACCCCTCTGCCGCCTTCCTACTTTCTTCTGATCAATCCCCGGCTGTCTGTCTTTATCCGTCCATTCGCTCCCGACTGGTCCGCTCCCGTGAAATAGTAACGTGGCCCCAGCAGTTGCTAACTCGGCTAAAACGCCACCGTGCGCACGGACTGATTAACGGTCACTTTATGTCTGAAGTGTACATTTAATAAACGAAGTTCCTCCGCTGGGCTCTCTCCTTCCCGACATGTTTCCACTGTGTGCTGTGCACCGGTCcggaccgttctcttaatacgtCCATGATCCAGACAGAAAGCTGCGATCACATACGGGTGTTTACACTATGACGTCACGGCACACCGACATCATCCAATGACAACGCAGCCCGCAGTTGCTGTCGAGAGCTCAGATAACTGTGACATAACACCACTCGGCAAGTCGGCCCACAGGCGTACGCCGGCGTAGTAAATGGTGCGGACCCACTTAAAAGTAAACTGCGCAGGCTTCGGGTGTGCACTTTCTCCAATGGTTATAACTGGACATAACCGGACGTAACAGTTGGGCCGAACCATCGTTGGCACCATTTTTAGCCGgttattttataatttaacCAGAAAACCAACTGCAAACTCAATTTAAATTGATCAAGTTAATTAATTGTTATAAAATACAGCTCACGGTGAGCTGGGGTCAGAAACCTATGTAGCTTgtatctagctagctacatgtcaGAAACGGAGCTAggttaagctagctagctagttgtagTTTctgtccatatatatatatacactagaaTAAATGCATTGACTTCTTAAAGTAAAACACATCTGAAAATatcacatatttgtttttattggtgGTGTTTGGCTTCATGGTGGTCACCGCATGGACGTCACAGCAAACAGTTCCCACCCCTATTCTAGGCTACAGGGTACTAGCTGCGCCTCAAAACGAGCGTACCCCAGCTAGAAAGAATCCACCCCGAGCCATAACGGAGccgacagagggagagaaaacaaCGACAACAACACATTATCGCCGAATTATCATCTAAGATCACATACAACATTAGTTCACGGGTCATGATGAGGAAGTTGTGTGAGGTGGCTCTTGTGTCCCTTCTTATTGGGTTTCTACTGAACACTGAATCAACATGGGCtaaaaaaagcagcagcagcagcaagaaaaCATCATCTTCTAGCAACAAGGGTGGGACACAATCAAAACCATCCTCTCAGCCAGGATACCCCCGACAGCCACAGAGTCCCAATCGAAACCCCAATCCTTATCCTCCTGGTGGAAGTTACCCAGGAGCAGGCAACACTAATCCAGGAGGAATTCCCAGACAAAATCCACCAAGTTATCCAGGAGCTGGTAGTAACCCCAACCAGTATCCTGGCAGAGCCAATCCTGCAGGTTATCCAAACCAGAACCCCGCAGGTGGATATCCAGCAGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCAGGAGGATATCCTAACCAGTACCCAGCTGCAGGAGGCTACCCAGCTGCAGGTGGCTACCCAGCTGCAGGTGGCTACCCAGTCAGAGGAGGAAATACAGGACAGGG
>TU237777
CAGCTAGAAAGAATCCACCCCGAGCCATAACGGAGccgacagagggagagaaaacaaCGACAACAACACATTATCGCCGAATTATCATCTAAGATCACATACAACATTAGTTCACGGGTCATGATGAGGAAGTTGTGTGAGGTGGCTCTTGTGTCCCTTCTTATTGGGTTTCTACTGAACACTGAATCAACATGGGCtaaaaaaagcagcagcagcagcaagaaaaCATCATCTTCTAGCAACAAGGGTGGGACACAATCAAAACCATCCTCTCAGCCAGGATACCCCCGACAGCCACAGAGTCCCAATCGAAACCCCAATCCTTATCCTCCTGGTGGAAGTTACCCAGGAGCAGGCAACACTAATCCAGGAGGAATTCCCAGACAAAATCCACCAAGTTATCCAGGAGCTGGTAGTAACCCCAACCAGTATCCTGGCAGAGCCAATCCTGCAGGTTATCCAAACCAGAACCCCGCAGGTGGATATCCAGCAGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCAGGAGGATATCCTAACCAGTACCCAGCTGCAGGAGGCTACCCAGCTGCAGGTGGCTACCCAGCTGCAGGTGGCTACCCAGTCAGAGGAGGAAATACAGGACAGGG
>XM_039779604.1
agaaTAAATGCATTGACTTCTTAAAGTAAAACACATCTGAAAATatcacatatttgtttttattggtgGTGTTTGGCTTCATGGTGGTCACCGCATGGACGTCACAGCAAACAGTTCCCACCCCTATTCTAGGCTACAGGGTACTAGCTGCGCCTCAAAACGAGCGTACCCCAGCTAGAAAGAATCCACCCCGAGCCATAACGGAGccgacagagggagagaaaacaaCGACAACAACACATTATCGCCGAATTATCATCTAAGATCACATACAACATTAGTTCACGGGTCATGATGAGGAAGTTGTGTGAGGTGGCTCTTGTGTCCCTTCTTATTGGGTTTCTACTGAACACTGAATCAACATGGGCtaaaaaaagcagcagcagcagcaagaaaaCATCATCTTCTAGCAACAAGGGTGGGACACAATCAAAACCATCCTCTCAGCCAGGATACCCCCGACAGCCACAGAGTCCCAATCGAAACCCCAATCCTTATCCTCCTGGTGGAAGTTACCCAGGAGCAGGCAACACTAATCCAGGAGGAATTCCCAGACAAAATCCACCAAGTTATCCAGGAGCTGGTAGTAACCCCAACCAGTATCCTGGCAGAGCCAATCCTGCAGGTTATCCAAACCAGAACCCCGCAGGTGGATATCCAGCAGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCACCTAACCAGTACCCTGCTGCAGGAGGCTACCCAGCAGCAGGTGGCTATCCCAACCAATATCCAGGCAGAGCTGGCAACCCAGGAGGATATCCTAACCAGTACCCAGCTGCAGGAGGCTACCCAGCTGCAGGTGGCTACCCAGCTGCAGGTGGCTACCCAGTCAGAGGAGGAAATACAGGACAGGGTTGGGGTCAGCCTGGTGCCTATCCAGGGGGTTATCCTGGTGGGGGGGCTGGTGGTTACCCCGGTGGGGGGGCTGGTGGTTACCCCGGTGGGGGGGTTGGTGGTTACACCAACTGGAACCCAAATAATAAGATCCTTAGTCCCCGCTATGGAGGAGGAGGATATGGCGGCGGCCCAGGGATGGGAGGGTCTCCATTCTCTCGTTCTGTACAGGGTATGGGTTACCAGCCCCAGTCTTCAGGTTTTGCCAAAAAAGCCATGTTGGCAGCAGGCGTTGGTGCTGTGGCTGGAATGGCCGTTGGATATGGACTAGGGCGCTTCCCTCGACCACACTTTAATTTCCGCAACCCTGAAGAAGAGCAATACTACAACAACTACATGTACCGCCGTTATGGCACCCAATCTACAGATGAAAAAGACTATGGCCGTGATTACGTCTACAAGCCTCCGCCACGAGCAGAGACTTATGACAAGTTCATGGAACGCTGTATGAATAGGACTGACCTTCTTAAAGACCAGGGGAGCAGCTCTACCGCGCCTAAAAGTCAGAGTGGAGGTGATAATGATGACACCGTCGGCATAGAAGAGATtggatacccagccctaattgagCAATTGAAGTCCCGGCGCTGTGTTGAGCAGTACATGGTCTACTCTGAGAGTTTTCTGCAGGAACGAAAAGCTGAACAACAAATCGAGCCAAGAGGCAGCAGCCCTCCGAGCTACGGGGTGATTCAGCTGTTCACCTCCCTCCTCATGCTAATGTCCAGCATGCTCCTTCTCCAGTGAGAATACTTTGTCCTTTTACCATACTCCAAATGGATTTCTGCTTCCTCCATTATAACTGCACGGCCATATACTTCTTATGTATTATAATCTCCATAGTAACCGTTCTGGGTCATATTTAGTCAATCCTCTATTATTGTTACAAAAAACTactaaaaagtaacaaaatgcaGAATATAAAGTAACTAAAGGAGTCAATTTTAAGAGGCAGCAATCAGTTTAAAATCATCAGTTGTGTGTTGTACATGCTgcactgtttttcttttaagaaTATATTTAGCACTTTTATACTCCACATTATTGAACACTGAATGCATAGAAGATTCAGGGTACTTTAGTTCAGTTTTTGTGACAATTTATTGTGACAGTATGCCTGCTACtttgtaaaataggaatgtgaCATTAAggattttatatatttacaaaaacatcaCTAACCTCATTCCATAATTTATTCATCCTTTTCATCTGGAGAATTCAACAGACTGATTCTTCCCTGCATTCGTTAAATATTCTTTTATCAAAGGAATATTTACTTTTCATCAAATATAAAAGAATGTTTAAGCCAGAGTTTAGCTAATTTTAAAAACCGGGCTCTTAAAAGGGGAGATTTTCAGATCGTCAGTGCAAAGTACAGATGGTGTTCACTTCCAAATAATAGTTTAATAGCCataagctgttttttttaaggacaAAGGCACCaacaggaaaagaaaatgttataaATAAGAAAGGAGAAATAAATGCCTTCAGTTCCACAATGTGATTTGCTGGGGGTTTGCTCAACATGATAATCTGTGGATGATTGGCTCTAAATTGTTGTGTATTGGCCAAGAAGAGACCATTAAATTGTCATAAAATGAGCCATGTGCACATTTTGATACAAACCCTTGCCCCTATTAGCGTTTGCATATTAAGTCAAGCTTCCCTTATGACCACCAAATTGGTAAATTTCCCTTTGGACAAATGGTTTACTATCCAACAATAAACCGTTAAACACTTGTATGACAGAAATCAAAATACGACTGGAGGTGTCCTCAAAGTAAAGTACAGCTCTACTCCTTCTCAGGTACCTGATACTAACACTTTGTTTATTGCCTGTAAAATCCTGGATTGCATGTAATAGCATGTGTCCTTTGATGTGCAGCAAATGTCGTCTTTAGTGCTGTAGTGGTGTTGCTACCTTGCCTGCAGCTGTTGAGAACAATAGGTGCATTTGTTGACAACAGCGCCTGATGCTTTGAATCTGTGCAGTCCTACATGTAGTTTGGTGAAAGCTGGGATTTGATTGAGGTTTTGAACAGATAAAGTTCCAAAACAATTCAAGACTTTAATCCTAAATTCTGGCATCCCAGAACAAATTCTAAGCTTTATATCTGTACCTTAACCTTATCACACATAGTATCTTTATGTTGTATCTGTCATCAGTCTGACAAGATTAACACTGAAACTTAAAGCACTGGCAATGGCTTAAAACTGCCTGGAAGCAATGGAAGTCACAGAGTCTGTCACATTGTATGTGAATACTGCTGTAAGTATTGGCGGGTCTGTAAATATCTCTTTTTGTGTTTCACGAACTCTAGCCTCATGGTGTGTGTCCCGAGGAATCTAAATTTTGCTCTCCTTTGCCTCACACTGGGTTTGCGAGATTGTGTATAGTTAGGTTTATCTGTACAttatttctttgtgtttgtgattgTCTTTTATCTTATCTCTTTCCCTCTGGAAAGTTTCAACCAAGTAAATGTgcagtttaaataaaaactgtCACTTTTGATTTCATCCTGCTATTTTAAACAGAGTACtggtgtacacacacaaacacacacacacacacacagacacacgcttcacatttcacttttattcttgtaatcTCCCAGTTCGTTTTCACACTGCAAGGTTTTTCCTGTTCATTTTTGTTGATTCTGGCAAAGTGTTTCCAATcgatttcaaataaaaaatttgacattttcatACTATCTAGGCTGTAGAATATCTGTAAAGTGCACTTATTTCCCTTTAGGTTTAGATATTCTGTAACTGTCATTGAGCTCAGATTGGGACTACAGTCATGTATGTTTATTTCTGGTTTGACTTGCAGTTGTAAATGCTTTGGGTTGCTAATATGGTTTATGtgctaaataaaataagtaacACAATAA

Function

GO:

id name namespace
GO:0051260 protein homooligomerization biological_process
GO:2000047 regulation of cell-cell adhesion mediated by cadherin biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0007417 central nervous system development biological_process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules biological_process
GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules biological_process
GO:0005886 plasma membrane cellular_component
GO:0009986 cell surface cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237773 False 740 TUCP 0.52 2 18076239 18077502
TU237776 False 1866 TUCP 0.50 3 18075032 18077502
TU237777 False 659 TUCP 0.51 3 18076239 18077502
XM_039779604.1 True 3860 mRNA 0.43 2 18076068 18080451

Neighbor

gene id symbol gene type direction distance location
LOC120545636 NA coding upstream 112527 17955092 ~ 17962505 (+)
ggcx ggcx coding upstream 160350 17908044 ~ 17914682 (+)
fam136a fam136a,LOC102792467 coding upstream 178213 17894989 ~ 17896819 (+)
slc20a1b LOC103372752,LOC104961022 coding upstream 200317 17864272 ~ 17874715 (+)
drg1 drg1 coding upstream 228617 17840135 ~ 17846415 (+)
trim69 LOC103369922,LOC104923159,LOC104948156 coding downstream 22188 18102639 ~ 18106880 (+)
anxa4 anxa4 coding downstream 95669 18176120 ~ 18184887 (+)
LOC120544962 LOC104923128,LOC100702751,LOC101476754,LOC102201716 coding downstream 112723 18193174 ~ 18199694 (+)
ggt5b NA coding downstream 180820 18261271 ~ 18270389 (+)
rnf34b LOC102198247,LOC101472476,LOC102778596,LOC102300128,LOC100691293,LOC108232543 coding downstream 262268 18342719 ~ 18360587 (+)
G175660 NA non-coding upstream 9518 18065221 ~ 18065514 (+)
G175656 NA non-coding upstream 18719 18054460 ~ 18056313 (+)
G175637 LOC103369931,LOC102795461,LOC100696878 non-coding upstream 65792 18007739 ~ 18009240 (+)
G175547 NA non-coding upstream 191201 17876999 ~ 17883831 (+)
G175445 rnf208 non-coding upstream 435701 17631346 ~ 17639331 (+)
G175666 LOC104923170 non-coding downstream 5582 18086033 ~ 18094153 (+)
G175670 NA non-coding downstream 67091 18147542 ~ 18148547 (+)
G175687 NA non-coding downstream 127323 18207774 ~ 18209059 (+)
G175695 LOC103473718,LOC103148770,LOC106925514,LOC101169050,LOC106514486 non-coding downstream 150582 18231033 ~ 18234162 (+)
G175696 NA non-coding downstream 154785 18235236 ~ 18238947 (+)
lhx6a lhx6,LOC103363386 other upstream 818568 17241997 ~ 17256464 (+)
rbm18 rbm18 other upstream 834653 17223586 ~ 17240379 (+)
LOC120545445 strbp,LOC102791526 other upstream 1082518 16904375 ~ 16992514 (+)
LOC120545594 camkk2,LOC101480815,LOC100704955,LOC102799510,LOC104945421 other upstream 1830943 16220410 ~ 16244089 (+)
snrpd3l snrpd3,LOC105014836 other upstream 1855319 16216949 ~ 16219713 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other downstream 44391 18124842 ~ 18145450 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other downstream 215385 18295836 ~ 18328825 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other downstream 311288 18391739 ~ 18400446 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other downstream 456180 18536631 ~ 18548141 (+)
cabp7b cabp7,LOC104925332 other downstream 554575 18635026 ~ 18651069 (+)

Expression


Co-expression Network