G175687


Basic Information

Item Value
gene id G175687
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18207774 ~ 18209059 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU237805
AGAATTCCAGTGGACTTGTTATCATTTTCCCCTGGAACTACTGAAACAGACTGCTGTTTCAAAGGATTAAGGGGTTTTACAGGTTGAAGCCtgcTAAAGTAATAGGAGGCCCCTCCTTCTTGCCACCTGCTTCCTCCCCTGCACTCTGCACTGCCGCAGGCTGGGACTCTTGTAGTGGAGCCTCCTGGACATGCACAGGACTAATGTCCTCTGACTCGGGGTCACATGCACGGTTATCAGGTATGGTCACAGGAAGTGCGGGAGCGCGGGCCTTTGAGGATTTGATTTTTACTTGAGAGGCGGCATCTTTATCAGCAGCTTGGGACACGACTGGAGGCCATTGTACTGAACCAGTATTGCCAGAAGTTGTTGCATCCTCTTGGGCTACATTTTCCTCTTCGTCGTCGTCTTCAAATGGATTTAAGCCATAAACGATAGGGAATTGTTTTGCCCCCGAGCCACATTCATGGGAAATGTCGCCATCAGAAGACCGTCCTGTGTTATCAGATGATAGCCCTTCTTCCACAGAATGAGGTCTAGACGGCGCAGGACGTTTACTGTGTTTGGCTCCATTTGAGGTTTCTTTAGTGGAACTACTTTGTGTCATGCTCTGGGTGTTCTTTGTATCTGTGGGAGACCTACTCAGAGGAGCGATCATTTGCACTGAGCGCTGAGGGAGAACAGTTTTGATGTCTTTACTTTTCTTGTTAATTTGTGCCAGATGTGGCGTAGAGCCATGCTGCTCCCCCTGAGCCTGTCTCTCAGCTTGATTCCCTCCTGGAGGCTGTGGAGCCAACCGCCTCTCCCGTTGAGTACTAATAGGATTCTTTTCATCAGTGGAAACGGGCTTGCTTCCCATCAGTGATGCAGCAGATTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU237805 True 880 lncRNA 0.50 2 18207774 18209059

Neighbor

gene id symbol gene type direction distance location
LOC120544962 LOC104923128,LOC100702751,LOC101476754,LOC102201716 coding upstream 8080 18193174 ~ 18199694 (+)
anxa4 anxa4 coding upstream 22887 18176120 ~ 18184887 (+)
trim69 LOC103369922,LOC104923159,LOC104948156 coding upstream 100894 18102639 ~ 18106880 (+)
LOC120545636 NA coding upstream 245269 17955092 ~ 17962505 (+)
ggcx ggcx coding upstream 293092 17908044 ~ 17914682 (+)
ggt5b NA coding downstream 52212 18261271 ~ 18270389 (+)
rnf34b LOC102198247,LOC101472476,LOC102778596,LOC102300128,LOC100691293,LOC108232543 coding downstream 133660 18342719 ~ 18360587 (+)
orai1b orai1,LOC103390458 coding downstream 175749 18384808 ~ 18387472 (+)
setd1ba setd1b coding downstream 196319 18405378 ~ 18421449 (+)
LOC120545648 NA coding downstream 249453 18458512 ~ 18461772 (+)
G175670 NA non-coding upstream 59227 18147542 ~ 18148547 (+)
G175666 LOC104923170 non-coding upstream 113621 18086033 ~ 18094153 (+)
G175660 NA non-coding upstream 142260 18065221 ~ 18065514 (+)
G175656 NA non-coding upstream 151461 18054460 ~ 18056313 (+)
G175637 LOC103369931,LOC102795461,LOC100696878 non-coding upstream 198534 18007739 ~ 18009240 (+)
G175695 LOC103473718,LOC103148770,LOC106925514,LOC101169050,LOC106514486 non-coding downstream 21974 18231033 ~ 18234162 (+)
G175696 NA non-coding downstream 26177 18235236 ~ 18238947 (+)
G175772 NA non-coding downstream 212470 18421529 ~ 18422678 (+)
G175792 NA non-coding downstream 220625 18429684 ~ 18431697 (+)
G175797 NA non-coding downstream 240743 18449802 ~ 18451068 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other upstream 62324 18124842 ~ 18145450 (+)
G175640 LOC102204295,LOC100701817,LOC103369925,LOC106514495,LOC101480226 other upstream 112251 18067132 ~ 18095523 (+)
LOC120545364 NA other upstream 127323 18075032 ~ 18080451 (+)
lhx6a lhx6,LOC103363386 other upstream 951310 17241997 ~ 17256464 (+)
rbm18 rbm18 other upstream 967395 17223586 ~ 17240379 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other downstream 86777 18295836 ~ 18328825 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other downstream 182680 18391739 ~ 18400446 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other downstream 327572 18536631 ~ 18548141 (+)
cabp7b cabp7,LOC104925332 other downstream 425967 18635026 ~ 18651069 (+)
LOC120545610 NA other downstream 447465 18656524 ~ 18657619 (+)

Expression


Co-expression Network