G175891


Basic Information

Item Value
gene id G175891
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18587759 ~ 18588293 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238090
ctggcacctcctacaggccattggcaaaattccaccgctcccggttgagtttctccaatcagggccacagggtgtgtctatctgcctgtcaatcactgttcAGGTTCGTACACGCatataagagcgttctcccctcccacgagctgcagaaaggtttcccaaaactccggtgaatattggagtggcttttcagaggtggcatGATCTGCGgaattttaaagatctgaagaacgatgcagacgtagccacatttcttctcaacaggtaacataattacgatgaatgatttatctttcacttggttatttgtagtcaaaagtccacaaagctacgttggtgagtaTATGTAGAAGATGGATACTATggatagtaacgtttgcacagtggtcggtctgatatgatgctgaaatggctaacagtagcctgctagttagcattgttttactgttggtgagtaaagttaacgttgtgttagtgttttgttattgaacatgttgtctgacatgccggcagttctgtcaaactccgttgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238090 True 535 lncRNA 0.44 1 18587759 18588293

Neighbor

gene id symbol gene type direction distance location
m17 NA coding upstream 12625 18573664 ~ 18575134 (+)
taok3b LOC104958930,LOC103360656 coding upstream 16711 18562440 ~ 18571048 (+)
LOC120546055 LOC103360654,LOC104934677,LOC104958911 coding upstream 27326 18558560 ~ 18560433 (+)
LOC120546054 susd2 coding upstream 30299 18548787 ~ 18557460 (+)
LOC120546057 iscu,LOC100705178,LOC102784710,LOC103373105,LOC104958920,LOC101065972,LOC105915304,LOC101167135 coding upstream 113720 18471247 ~ 18474039 (+)
git2b LOC103360644 coding downstream 116480 18704773 ~ 18723257 (+)
LOC120545567 LOC102210433,LOC104924646,LOC102792360,LOC100707569,LOC104958897 coding downstream 135592 18723885 ~ 18726384 (+)
cplane1 NA coding downstream 163751 18752044 ~ 18772197 (+)
LOC120545005 wdr70 coding downstream 184347 18772640 ~ 18834666 (+)
opn4xa LOC103360637 coding downstream 270975 18859268 ~ 18864887 (+)
G175804 rnf185 non-coding upstream 121695 18464270 ~ 18466064 (+)
G175797 NA non-coding upstream 136691 18449802 ~ 18451068 (+)
G175792 NA non-coding upstream 156062 18429684 ~ 18431697 (+)
G175772 NA non-coding upstream 165081 18421529 ~ 18422678 (+)
G175696 NA non-coding upstream 348812 18235236 ~ 18238947 (+)
G175917 NA non-coding downstream 69397 18657690 ~ 18658284 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding downstream 82090 18670383 ~ 18673965 (+)
G175974 NA non-coding downstream 247882 18836175 ~ 18836754 (+)
G175973 NA non-coding downstream 262785 18851078 ~ 18854548 (+)
G176173 LOC104959907,LOC106527788,LOC107745368,LOC106563285 non-coding downstream 900017 19488310 ~ 19492082 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 39618 18536631 ~ 18548141 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other upstream 187313 18391739 ~ 18400446 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other upstream 258934 18295836 ~ 18328825 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other upstream 442309 18124842 ~ 18145450 (+)
G175640 LOC102204295,LOC100701817,LOC103369925,LOC106514495,LOC101480226 other upstream 492236 18067132 ~ 18095523 (+)
cabp7b cabp7,LOC104925332 other downstream 46733 18635026 ~ 18651069 (+)
LOC120545610 NA other downstream 68231 18656524 ~ 18657619 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other downstream 87728 18676021 ~ 18723785 (+)
LOC120545529 ermp1,LOC102800265 other downstream 791957 19380250 ~ 19402379 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 1323543 19911836 ~ 19914680 (+)

Expression


Co-expression Network