LOC120545610


Basic Information

Item Value
gene id LOC120545610
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18656524 ~ 18657619 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238115
ATACGTCAATCCACCGACATGGCGCTGGCTAAGTCCGTCTACAATTTGCTCTTCAGGAGAACGTCCACTTTCGCCGTAACCATCATGGTTGGAGCGGTCTTCTTTGAACGACTATTTGACCAAGGTGGTGACGCGATCTTTGAGCAAATGAATCGCGGGAAACTATGgaaacacattaaacacaattacGAGAACAAAGAGGAGGAATAAAAGGCCGCGGGGTTAACCTAAAGGCTGAGGTGCAACTGTTGTCAGACTTCCGTCATCCATTGTTCCTGGACTCGATACCTGAATCAAACATCAGTCAACATGGACAGTGCGCTCAAAGTCATGCCTAGTGGGACCCGTGGGAGCTGATCCACACCATCATGAAGAGGGAGCAATGGTTCCTGTTACCTCTTCCTCCACTTCCTGTTATTTGTAAAGTCTTCGTTCTCCTCACATATTGTAAATGGTTAAATTAAACTTGTTAATGTGGTA
>TU238116
ACTGAGGACAATCATTGTGAAGGAGAACGTCCACTTTCGCCGTAACCATCATGGTTGGAGCGGTCTTCTTTGAACGACTATTTGACCAAGGTGGTGACGCGATCTTTGAGCAAATGAATCGCGGGAAACTATGgaaacacattaaacacaattacGAGAACAAAGAGGAGGAATAAAAGGCCGCGGGGTTAACCTAAAGGCTGAGGTGCAACTGTTGTCAGACTTCCGTCATCCATTGTTCCTGGACTCGATACCTGAATCAAACATCAGTCAACATGGACAGTGCGCTCAAAGTCATGCCTAGTGGGACCCGTGGGAGCTGATCCACACCATCATGAAGAGGGAGCAATGGTTCCTGTTACCTCTTCCTCCACTTCCTGTTATTTGTAAAGTCTTCGTTCTCCTCACATATTGTAAATGGTTAAATTAAACTTGTTAATGTGGTA
>XM_039780123.1
GCTTCCGTTCCTGCGCAATACGTCAATCCACCGACATGGCGCTGGCTAAGTCCGTCTACAATTTGCTCTTCAGGAGAACGTCCACTTTCGCCGTAACCATCATGGTTGGAGCGGTCTTCTTTGAACGACTATTTGACCAAGGTGGTGACGCGATCTTTGAGCAAATGAATCGCGGGAAACTATGgaaacacattaaacacaattacGAGAACAAAGAGGAGGAATAAAAGGCCGCGGGGTTAACCTAAAGGCTGAGGTGCAACTGTTGTCAGACTTCCGTCATCCATTGTTCCTGGACTCGATACCTGAATCAAACATCAGTCAACATGGACAGTGCGCTCAAAGTCATGCCTAGTGGGACCCGTGGGAGCTGATCCACACCATCATGAAGAGGGAGCAATGGTTCCTGTTACCTCTTCCTCCACTTCCTGTTATTTGTAAAGTCTTCGTTCTCCTCACATATTGTAAATGGTTAAATTAAACTTGTTAATGTGGTACA

Function

GO: NA

KEGG:

id description
K00419 QCR9, UCRC; ubiquinol-cytochrome c reductase subunit 9

RNA

RNA id representative length rna type GC content exon number start site end site
TU238115 False 480 lncRNA 0.46 2 18656964 18657617
TU238116 False 446 lncRNA 0.45 3 18656524 18657617
XM_039780123.1 True 499 mRNA 0.46 2 18656947 18657619

Neighbor

gene id symbol gene type direction distance location
m17 NA coding upstream 81390 18573664 ~ 18575134 (+)
taok3b LOC104958930,LOC103360656 coding upstream 85476 18562440 ~ 18571048 (+)
LOC120546055 LOC103360654,LOC104934677,LOC104958911 coding upstream 96091 18558560 ~ 18560433 (+)
LOC120546054 susd2 coding upstream 99064 18548787 ~ 18557460 (+)
LOC120546057 iscu,LOC100705178,LOC102784710,LOC103373105,LOC104958920,LOC101065972,LOC105915304,LOC101167135 coding upstream 182485 18471247 ~ 18474039 (+)
git2b LOC103360644 coding downstream 47154 18704773 ~ 18723257 (+)
LOC120545567 LOC102210433,LOC104924646,LOC102792360,LOC100707569,LOC104958897 coding downstream 66266 18723885 ~ 18726384 (+)
cplane1 NA coding downstream 94425 18752044 ~ 18772197 (+)
LOC120545005 wdr70 coding downstream 115021 18772640 ~ 18834666 (+)
opn4xa LOC103360637 coding downstream 201649 18859268 ~ 18864887 (+)
G175891 NA non-coding upstream 68231 18587759 ~ 18588293 (+)
G175804 rnf185 non-coding upstream 190460 18464270 ~ 18466064 (+)
G175797 NA non-coding upstream 205456 18449802 ~ 18451068 (+)
G175792 NA non-coding upstream 224827 18429684 ~ 18431697 (+)
G175772 NA non-coding upstream 233846 18421529 ~ 18422678 (+)
G175917 NA non-coding downstream 71 18657690 ~ 18658284 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding downstream 12764 18670383 ~ 18673965 (+)
G175974 NA non-coding downstream 178556 18836175 ~ 18836754 (+)
G175973 NA non-coding downstream 193459 18851078 ~ 18854548 (+)
G176173 LOC104959907,LOC106527788,LOC107745368,LOC106563285 non-coding downstream 830691 19488310 ~ 19492082 (+)
cabp7b cabp7,LOC104925332 other upstream 5455 18635026 ~ 18651069 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 108383 18536631 ~ 18548141 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other upstream 256078 18391739 ~ 18400446 (+)
lrrc75bb LOC102299816,LOC101473269,LOC102199085,LOC100691028,LOC103366102 other upstream 327699 18295836 ~ 18328825 (+)
antxr1b LOC100694769,LOC102799311,LOC101477777,LOC102295999 other upstream 511074 18124842 ~ 18145450 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other downstream 18402 18676021 ~ 18723785 (+)
LOC120545529 ermp1,LOC102800265 other downstream 722631 19380250 ~ 19402379 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 1254217 19911836 ~ 19914680 (+)
pappaa pappa other downstream 1857728 20515347 ~ 20620786 (+)
G176526 NA other downstream 2289065 20946684 ~ 20947055 (+)

Expression


Co-expression Network