G176173 (LOC104959907,LOC106527788,LOC107745368,LOC106563285)


Basic Information

Item Value
gene id G176173
gene name LOC104959907,LOC106527788,LOC107745368,LOC106563285
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 19488310 ~ 19492082 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238472
AAGAGTTGAAGAGAAATGTAAAAGGAAACCATTTCTTCCACCTAGAACCCTCTTTTCGGTCTTCctaaaatggtgtgtgtgtgtgtgtgtgtgtctctctcaccATTCTCCTCAGCAAACTGCTTGGCTTCCTCATATGTGACGTCCCTCTGGGCCTCCAAGTCTGCTTTGTTTCCGATGAGAATGATCACAGTATTAGGGTTGGTGAGGTTTCTGGCATCAGTCAGCCAGCTGCTGAGGTGGTTGTACGTGCTTCTCCTGGTGATGTCGTAGACCATGAGCGCCCCTGCAGCTCCGCGGTAGTAGGAGCGGGTGACAGCCCTGAAGCGCTCTTGTCCCGCTGTGTCCCAAATCTGCAGCTTGATCTTCTG

Function

NR:

description
PREDICTED: ras-related protein Rab-14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238472 True 371 lncRNA 0.51 3 19488310 19492082

Neighbor

gene id symbol gene type direction distance location
abl1 abl1 coding upstream 2204 19449563 ~ 19486106 (+)
exosc2 exosc2 coding upstream 40711 19441576 ~ 19447599 (+)
mlana mlana coding upstream 166071 19318972 ~ 19322239 (+)
LOC120545863 NA coding upstream 213677 19273397 ~ 19274633 (+)
rfx3 rfx3 coding upstream 274845 19195656 ~ 19213465 (+)
ddx54 NA coding downstream 24728 19516810 ~ 19525324 (+)
trnac-gca_32 NA coding downstream 25153 19517235 ~ 19517306 (+)
lman2la lman2l,LOC108231067 coding downstream 402034 19894116 ~ 19900260 (+)
pax8 pax8,LOC102780591 coding downstream 437489 19929571 ~ 19943843 (+)
LOC120545547 LOC103368295 coding downstream 471689 19963771 ~ 19970112 (+)
G175973 NA non-coding upstream 633762 18851078 ~ 18854548 (+)
G175974 NA non-coding upstream 651556 18836175 ~ 18836754 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding upstream 814345 18670383 ~ 18673965 (+)
G175917 NA non-coding upstream 830026 18657690 ~ 18658284 (+)
G175891 NA non-coding upstream 900017 18587759 ~ 18588293 (+)
G176177 NA non-coding downstream 3954 19496036 ~ 19502184 (+)
G176225 LOC104956387,LOC101069739 non-coding downstream 71164 19563246 ~ 19565919 (+)
G176226 LOC103367784 non-coding downstream 74857 19566939 ~ 19567169 (+)
LOC120546000 NA non-coding downstream 98660 19590742 ~ 19593712 (+)
LOC120545999 NA non-coding downstream 117589 19609671 ~ 19661055 (+)
LOC120545529 ermp1,LOC102800265 other upstream 85931 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 764525 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 830691 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 837241 18635026 ~ 18651069 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 940169 18536631 ~ 18548141 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 419754 19911836 ~ 19914680 (+)
pappaa pappa other downstream 1023265 20515347 ~ 20620786 (+)
G176526 NA other downstream 1454602 20946684 ~ 20947055 (+)
G176753 NA other downstream 2786798 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 3004331 22496413 ~ 22524405 (+)

Expression


Co-expression Network