G176335 (LOC103376127)


Basic Information

Item Value
gene id G176335
gene name LOC103376127
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 20079851 ~ 20087641 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238655
GTATCATTGCAAGGTTTATCAGAATATTTAACACCAAGTATCAGAATACAGCAAAGGACATACAAAGGTTTATAATGTCATGAAACAGAAAATCAGCTTAACAGTACACAATAATGGTAGTCTGAATGTTTTTAATACATGGTTAACTGTACACataaggagaaaaaaacaaacaccataATTAGACATTTTGAAATTATATCCCTTTTCATTAAGAAATGAGGTTAATACCAGAATCATGTTTTTCATAATGATGCATCATTTATACCATTTATATTAgatcacacaaaaataaaaaatgaattaaaaagttatTAGCATGGACTGAGTCCAACGCCCCACTGAGTCCACAGCGAGGGCTCAGTGGGGCGTTGGTGAACTGGGAGGTACCaaataagagttttttttttatcataatacttaaaacataaaaatactaTATTAATTATTACACAGGTAGAAGTACAGAGGCTTAGCAGTCTTGAATAGTTCAGGTACAGAACATACACAAAAATCTACCACTTATTTTTCTTCATAACAAGATGCAACATCAAATTTCAAATTACACAATTACAATCTTTGAACATTTTCAGTatgaaaacagaacagaaaaagagGGACAATTTTCCTGCAACACTaatcacaggaaaaaaagaattttttatataagtatatatatatatatatgaaacatatatattttaaattaacagTCAAATATATGAGCATATATACAGATTTACAAGGTAGCAAAGGCAAAAAAGCTATTTGCAACATCCCCCTAAATCCTATCATACCAGATAATTCTAATAAATTATCCATGacatttccatttaaaaaaaacaaaaaaacaaaaaaaaacaacatcttaAAACTACAAGTTAAAAGTGTCAAAATATTAGAGAACCCATCTTTGTTTCAAAAGTGAAATAAGATAttgcaccttttttttcttttaaaccagAGTACAATAAAAGGACAATGAAAAACAGCATACAATGCACAACAGGGATTCAATTAGAACTATTGCCACTGGCTGACATTAATCCATGTTTTTAAACCTtgtaacaaaaatacatttcctgTAACAAAACATCACAGTTTCATTTCACTGAattatgtaaaagaaaacattttaacacaCCCTTTTAAACATCTTATGACATAGGACAAATGGTATTCAAGACTGCTAAGCACATAATCATGGGTTCATTTCAACATAACTAGAAAAAATAGATCATATTGCCTTTTGAAATGTTACAACTCTTGGGTTCATTTTGGCGGTACAATCTGAGTCAAAGACAGGAAAACATAGAAAAACAAGCAGCTCTCTCAAGTCCAAAAAGGGATCCCCGATACTGTCTATCCAAAATAACAGTGTACACAAGCATTTAGTAACAAATAACTGTTCCTGATTTTTAGAAATATTACTTTATCATATAAGTCATTCTACAGCTAGTGTTTCTCACTAAGAAAAAAAGTCTTCAAGGCGTTGCAAATCTAGAACCCCCTCTGTTAAAAAAGGGTTGTTTTCATCCTCAGTGATTCAAGTCTTTCACCTGGGCGTCTTCTCTTAATGATCCTGAAGGCCCGGGGCTTGTGTCTGCTGTGCGCCCTGGTTGAAGTAGGCCATCGGCTGTCTGTAGAAGTCAACCCAGGCGTTGTAGTCCGGATTAGAGGTCTGCTGAGATGCAGGGCCAGCTGTCTGGCCCCAAGCTTTGTTGTATTCAGGAGCAGTGCTCTGAGCTTGGTTTTGCTGACCTAGCTTTTTATAATACTGCTCCCAGTCCATCTGGCCCGTCTGGGATCCATTGTGACCTGAAACCAGACACAGATAACACCACTAGAGTTACAGAGTGGGCTTTgcttttcctcttttgctctcATCCGTTTCCTAATGATTTCCATCGACAGCCAATTTAAAATCTGTCCGTACAGGAAAGAGGTGGTTACCCACAGGGAGCGCGACCATCTCACCCCAGCCCGCTGAAGACTTTGAATACACTGCAGCGCTACAAAACTCCCTGGCTGTACTTTCAgagtcaaatttaaaattaattttgtttaCATAGCTTTGTTCTCTCATTGACCAAAATTATCTTGCTGGGAAAGGATCAGatttcttgatttttttttgcatttttatattaaaatctaGTTATGTAGCTTTAGCAGCTACAATAGTTCATTTTACTTACTGTGGTCCTGTTGGCCTTGAGGCTGCCATATTTGAAAAGTTGTGCCCCATCCTCCTGTCATGAACGTCTGAGCCCCATGTTGAGGAGGAGTGGTTGGTCCTTGGTTGTAGGGATTCATACCGAAGCTGCTGTTGCCCCCGATTCCTGGGCCCCCAATTCTCTCATCGATCAGCTGGCGGGCCTTTTCCAACTGCTGAGGGGTGCCTCGGATGGAGAAGATGCGCACGTTGGGGTCTGTGTTGGGCGGCGGGTTTCTCTGTAGCTCCACGTGGGCGCGAGACTGCTCTTTGATGTTCTTGATGGTTTCTCCACCTTTGCCAATCACTAGTCCGCACTTGTCAGCAGGTACTGCATAGGTAACCTCCTGCAGACCTCCAGAGCCTCCCATGTTAGAGTCACTTCGCCCTCGACGtcccatcacacctcctccaaACCCATCTCGCTCCTACAGGAAGGGAACCAggactttttttaaaaccattttctGGAAAGGTTTAAGGCTCCCTAAATTGCTT

Function

NR:

description
PREDICTED: far upstream element-binding protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238655 True 2713 lncRNA 0.38 7 20079851 20087641

Neighbor

gene id symbol gene type direction distance location
traf2b traf2 coding upstream 29628 20037864 ~ 20050223 (+)
bspry bspry,LOC100703027,LOC102783296 coding upstream 51421 20020957 ~ 20028430 (+)
LOC120545547 LOC103368295 coding upstream 109739 19963771 ~ 19970112 (+)
pax8 pax8,LOC102780591 coding upstream 136008 19929571 ~ 19943843 (+)
lman2la lman2l,LOC108231067 coding upstream 179591 19894116 ~ 19900260 (+)
bbln clg14h9orf16,LOC103376136,LOC106518230,LOC103028983 coding downstream 80286 20167927 ~ 20170745 (+)
dnm1a dnm1 coding downstream 94104 20181745 ~ 20236007 (+)
hspa5 hspa5 coding downstream 175134 20262775 ~ 20266809 (+)
rgs3a rgs3,LOC102788614,LOC104953710 coding downstream 189646 20277287 ~ 20425401 (+)
znf618 znf618,LOC101485385 coding downstream 370715 20458356 ~ 20497767 (+)
LOC120544937 NA non-coding upstream 10021 20068760 ~ 20069830 (+)
G176346 fbxw5 non-coding upstream 17867 20055289 ~ 20061984 (+)
G176289 NA non-coding upstream 173728 19883987 ~ 19906123 (+)
G176292 mtfp1 non-coding upstream 187072 19888869 ~ 19892779 (+)
G176287 NA non-coding upstream 210304 19867818 ~ 19869547 (+)
G176357 fubp3,LOC106522831 non-coding downstream 1465 20089106 ~ 20090858 (+)
G176410 NA non-coding downstream 149886 20237527 ~ 20241216 (+)
LOC120545553 NA non-coding downstream 349530 20437171 ~ 20440566 (+)
LOC120545557 NA non-coding downstream 410181 20497822 ~ 20499818 (+)
G176477 NA non-coding downstream 412825 20500466 ~ 20502348 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 165171 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 677472 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 1356066 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 1422232 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 1428782 18635026 ~ 18651069 (+)
pappaa pappa other downstream 427706 20515347 ~ 20620786 (+)
G176526 NA other downstream 859043 20946684 ~ 20947055 (+)
G176753 NA other downstream 2191239 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 2408772 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 2444267 22531908 ~ 22537337 (+)

Expression


Co-expression Network