G176477


Basic Information

Item Value
gene id G176477
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 20500466 ~ 20502348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238866
tagggtgaaattactccgaaccatcactttaagagtaACTTAGCACCAGGCTGAAAAGCACTGTTTTGCTGCCCTCTCTGGTTGAAGGTAGCCTGTTTCACCATTAGTAGTAGATGGATGTGGTCAGAAACGTGTTCTGTTGCTCCTATAACCCCATCCAACCGTGATGGCGTGGGGTCTTGGGAGTACACATGTACATCATTGCAGCCAGGTGAGAAGTAAAACCGCTGGAGGTCAGCAAAGAGGACATTTTCAGCAGGTGTTAGGTCACTCTATAATGGTTTCttaactgattgattgattgttttcATGCATTAAGATTCTTGAAAGGAAGTATGATGTCATTCACATTTTAACAGTTTATCTATTTCCCCTTCTGTAAGGCTTGGGAGAGTATGACTTGATTCAGTGTAACCAAGACATAACATTACTTCATTGTTATAATATACTGCTGTTTTCAAACTGATTTATGTCACACATTTatattttggttaaaaaaaaagattgctgtaaattatattttcaatttaatttttttaattaccaatCCAATGTTTTACCTCAGTACGCAGAAGGTAATATTGAAATGTATAGATTGGAAATCAAAAATGTAGCTTTGGTCTAAGATATAgttaaaatactgtacattggTTTTAGCAGTGCTCCTCAAATGAACTGATGAAGGGATTTTTCTtacagtttttagtttttaagtattttaaataGGATATGCTCTGGGACAAAATGCCATTGTTGACATAATGATGTCAACTTAATTTTACTTAGAAATAACATTCATTTTGTTGATTAAATGGGAATTATATCTAAGATATGCATGCTTTTAATAAGAGTACTGATATATAAAGTTAGAACCAACATGATTCACTTCCATCTGATGAGAAACACTGACTTATGACTAGACGTTACCTTAAGACACTCATCAGGAGTCAGATAAGCAACAGGATTTTAACCGTTGGAGGTGGGAGTGGCGATGCTGATCATGGGTTGGTGTTTATGGCTTGACATCATCCATTTTCACAGGATGTATTATGTAAATGTGAGAGAACTGCTGTTTTTATGCCACAAGGGGGAGCCTTCATTTCAGAGATCCAGTAGGGAACACCAATAACATACCTCTATTTTCTACAGTAGCATTTAAAAGGTTTTTGATATAATAGAAAACTCAACTTAGATACTGTTATTAGAAAATTTAAATCAactaagttttattttgtttcaggATTTTAACTTATTCAGATAATGTAAATGGTGTAAGAATGCAAACATGGAGATCCTTTCTGTTTTAACTATGGATTACAGTCTGTATTATCAATTCAGGTTAAGAAACTAGTGTTGCTTTCATCCTATTTTACAGGCATTTCTTCCTTTTATACTCtgctaaaatgcaaaaaaaataggTTTGATTCTAATTAtttggtctttttttattgcactttGGCAGCAGATTCCTGTGTAGCTTTAGATCTGAGTTGTCCTATTAGTAAGCCTAATTTATACTTTTGTAGCAACACTATTTTTATATAATGGCGAAGAAagggttcagtgtctttttcttttttttcctgtgtcaTATGTGGCAGCACTGTTCAATGTTTCTTAAATACATTACCCACTGTAGTATGTGATGTGTGAATAAACTCCAAATCTGTGTCAA
>TU238868
gcataacctatttgtactactgtagacctttggtatcatttcgggcattattagtggggtaatgttaagagacacttcggatccattagcctctgcgctaagctattcagctgataacgctacgctacgctaactctcccaatgttcgacccaggtgaaaaaagcttctgggggggtgtttggctcgagatcatggtgcaaaggaccgtagggtgaaattactccgaaccatcactttaagagtaACTTAGCACCAGGCTGAAAAGCACTGTTTTGCTGCCCTCTCTGGTTGAAGGTAGCCTGTTTCACCATTAGTAGTAGATGGATGTGGTCAGAAACGTGTTCTGTTGCTCCTATAACCCCATCCAACCGTGATGGCGTGGGGTCTTGGGAGTACACATGTACATCATTGCAGCCAGGTGAGAAGTAAAACCGCTGGAGGTCAGCAAAGAGGACATTTTCAGCAGGTGTTAGGTCACTCTATAATGGTTTCttaactgattgattgattgttttcATGCATTAAGATTCTTGAAAGGAAGTATGATGTCATTCACATTTTAACAGTTTATCTATTTCCCCTTCTGTAAGGCTTGGGAGAGTATGACTTGATTCAGTGTAACCAAGACATAACATTACTTCATTGTTATAATATACTGCTGTTTTCAAACTGATTTATGTCACACATTTatattttggttaaaaaaaaagattgctgtaaattatattttcaatttaatttttttaattaccaatCCAATGTTTTACCTCAGTACGCAGAAGGTAATATTGAAATGTATAGATTGGAAATCAAAAATGTAGCTTTGGTCTAAGATATAgttaaaatactgtacattggTTTTAGCAGTGCTCCTCAAATGAACTGATGAAGGGATTTTTCTtacagtttttagtttttaagtattttaaataGGATATGCTCTGGGACAAAATGCCATTGTTGACATAATGATGTCAACTTAATTTTACTTAGAAATAACATTCATTTTGTTGATTAAATGGGAATTATATCTAAGATATGCATGCTTTTAATAAGAGTACTGATATATAAAGTTAGAACCAACATGATTCACTTCCATCTGATGAGAAACACTGACTTATGACTAGACGTTACCTTAAGACACTCATCAGGAGTCAGATAAGCAACAGGATTTTAACCGTTGGAGGTGGGAGTGGCGATGCTGATCATGGGTTGGTGTTTATGGCTTGACATCATCCATTTTCACAGGATGTATTATGTAAATGTGAGAGAACTGCTGTTTTTATGCCACAAGGGGGAGCCTTCATTTCAGAGATCCAGTAGGGAACACCAATAACATACCTCTATTTTCTACAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238866 True 1675 lncRNA 0.34 1 20500674 20502348
TU238868 False 1359 lncRNA 0.38 1 20500466 20501824

Neighbor

gene id symbol gene type direction distance location
znf618 znf618,LOC101485385 coding upstream 2699 20458356 ~ 20497767 (+)
rgs3a rgs3,LOC102788614,LOC104953710 coding upstream 75065 20277287 ~ 20425401 (+)
hspa5 hspa5 coding upstream 233657 20262775 ~ 20266809 (+)
dnm1a dnm1 coding upstream 264459 20181745 ~ 20236007 (+)
bbln clg14h9orf16,LOC103376136,LOC106518230,LOC103028983 coding upstream 329721 20167927 ~ 20170745 (+)
trim32 trim32 coding downstream 193704 20696052 ~ 20701783 (+)
lhx3 lhx3,LOC102793556 coding downstream 958778 21461126 ~ 21472938 (+)
LOC120544873 cunh9orf69,c14h9orf69,c12h9orf69,csgr02h9orf69 coding downstream 1005132 21507480 ~ 21509631 (+)
LOC120545487 nacc2 coding downstream 1010825 21513173 ~ 21543255 (+)
nup214 NA coding downstream 1044486 21546834 ~ 21584572 (+)
LOC120545557 NA non-coding upstream 648 20497822 ~ 20499818 (+)
LOC120545553 NA non-coding upstream 59900 20437171 ~ 20440566 (+)
G176410 NA non-coding upstream 259250 20237527 ~ 20241216 (+)
G176357 fubp3,LOC106522831 non-coding upstream 409608 20089106 ~ 20090858 (+)
G176335 LOC103376127 non-coding upstream 412825 20079851 ~ 20087641 (+)
G176507 NA non-coding downstream 434458 20936806 ~ 20937292 (+)
G176542 NA non-coding downstream 648919 21151267 ~ 21154855 (+)
G176559 NA non-coding downstream 895299 21397647 ~ 21399003 (+)
G176565 ak1 non-coding downstream 899566 21401914 ~ 21410459 (+)
G176644 NA non-coding downstream 1152855 21655203 ~ 21655587 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 585786 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 1098087 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 1776681 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 1842847 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 1849397 18635026 ~ 18651069 (+)
pappaa pappa other downstream 12999 20515347 ~ 20620786 (+)
G176526 NA other downstream 444336 20946684 ~ 20947055 (+)
G176753 NA other downstream 1776532 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 1994065 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 2029560 22531908 ~ 22537337 (+)

Expression


Co-expression Network