G176542


Basic Information

Item Value
gene id G176542
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 21151267 ~ 21154855 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU238944
AGCCTTTTAATGAGAAATAGATTATTATATGAAACATTCATTTGAAATAAGCTGATATAATGATCTTAACAGAACAGCAAAAAAGTACATAGGCAAGGTATTAGGTGTAAAAATCTTGAGACATCCATGGATACATGTAAGCAACACTGTGGTAGCATAATGCCATATGATAAAATGTGCTTGTTTTATGGACCTTGCAGTGACTCAAAACTAAAtcgtaatgtacagtatgttttgaCAAAATTTAAACACAGTCATACATTGTCATGAATCTAATTAGATACATAAGACATGGGTGCCCTCTACTTTGTGCTGATGTACTCAAATGGAGGGCTTTTTTTTGAAGTAGTCTTTGTATTCCCTTTCAATActgttatatttttataatattgtTACTGTAGCAGAGCATTGTTACTGTAACAGAGTTAATATTTACAGATATATTGTACAACAggggacaaaaaataatatcaacCATTACTTTAAGTCATCTTTTGACCCTCTTTCTGGTGGTTGATTTCCCCACATGCACAAACCCCCTGTAGTTCTTAGGAGCAGATGAAAAGTGTATATTTGATCATCACTTATGGTCTTAAATTCTGTAGCTAATTACGTGTCACTCTGTaacatctgtgtctgtgtaacaTCTAAAAGTATTCTCCAGCTTTAAACATGTTAAAGGGATAGATAACAggcacttaataataataataataataacaacaataataatcataataatcatgATAATAAGGTAACAATTCATTTGGAGAGTCCAATGTTAATGCTGAACAATCAAGTCCCCTTTTTTTACAGCATCTCAATTGATTACAGTGGGCATCTATCGTGTGGCCATCTCTGTCTCATTATAGCTTCAGTATGTCAAAGTCAGCTCTGCATCAAATAAAACTAATTCATCGGGAGGTACTGTTAGCATGCACATGTTACAATGACAATGTTATGGATACTAACATATTTGAAAAAGTCTACCATGTTAACATTAACATGCTAATTAGCTCAAAATACATAACTGGGGCTAATAAACTACAATACCAAGGAGCTTTGCGACAGCTTGCAGCTACTATCTACACCCAAGCAGATGCACTGGTCACGATACAGCACATTTAATTTGTATCCACCGGTCCAGATGCCCTCTTTCCCTCTTGCTGCTGCTTACCTCATGGCAGTAGTGCCATCCTATGCAAACTGGAAACAATAGCCCTGCAGAGGTATCTGCTCACTCACTAAATGCACCTTTACGGATGTTGGGCTATTAAACTGCGGCTATAGACTGATGATAGTCTTGTACTGTGAGATCAATTTGACAACACAGAGCTGAGCCTGACAACCTGAGCCTCAGTCGTCCTGAACCGGCCACCACATTCTGTATGCGCTAACCCATACATTAGTGAATTATTTTGCTGACTACTGAATCACCTGATATTGATTAGATTTAAGTGACTAAGTTATTATTGATGAAGCACCTCTCAAGAGTaaaaagtgcttcacaaaaagACTGACAACAGTAAAATAAACCATAAGGATAATCATCGCCACATGAAGCCAGACGTGATTCTGTTGGTTACATCATGACAAGAATGCACATCTAGAGACAGCTATTAAGGTTGTAATCGTGGATGCAATTAAATATGCAGCTGACAAAGCGATTTctataagaataaaaaaacaggtgTTGTTCCAGAGCCGCTGTATTTTCTTGTGTAAATCCAACCCGACATGGTTGTTCCCAGATATATTACAAGCCTCTGCTTACAGCTGACTCCACAAGACTAGTCTAATCACAATTTAAAGTAACAATAATTATTTAGAacacaaaattaaacaaaaaatagcAAGGCAACCAAACTTTATCTACAGTAAGAGACTAACagacataaaataaatacatacatggaaaagttttaaagtgctcatattatgctcattttcaggttcataattgtatttagatgttatatcagaataggtttacatggtttcattttcaaaaaacaccatatttttgttgtactgcacattgctgcagctcctcttttcaccctgtgtgttgagctctccgttttagctattGAGTGAAGCATCTCATTTCtgttcaatctttgttgggagtcgcacatgcacagtagctagttAAGGACAATTAGCCATTAAGAaccagagtatgagggcgtgccacgctagcagctaggcgagcattataacgtgtgttacaaagtgacgcacgtttgtcaccgaagtaaaggctggattataacagagctgtttggagcagtttgtgaacagtgttttctgttggagatggtaaatcCCTTAGGGGTGGACTTTGAGCTTTTTCACttataaacctataacatgcactaaaaagatatataacacatacaggaaagggaaaaagccaaaaagcacaatatgagcactttaagatgcTTTTCTAAAAGCTTGCAACTGGCTGTCAGGTTTTACACTGGGAGGAACGTTTTTCCAGAGTTTGGGAGCCATGGCAGCAAATACTcctcttttttaaattcaaaccCATCAATGAGAACAGCTATAGGTTGTATGACATGAGTGAACTTGCCTCTGTTGTTGTTAACAAACATGCAGGTAATGGACTGGACCTACAAATATTCATCAGCAATAGCAATGTTTCAGCATCAGATTACCCAAATAAAATGTGACCAACAATACATATAGGTAGTGTTTCATATTTCAGTTAGATGATTGAGAGTGTTAAACACAGTTGCAGCTCTGTTGATGTTTCCAGCAACATGCAAAACAAGGTTAAATTTCATATCTAGAGAAAAAAACTTGATCTTTACATGTGGTCATAAAAAGCTTACAGATTAAACACCGCCAAAAAGGTATTTTAAGCTTTAATAtaaccatttctttttttcctttttttttttcctgtggcACAACAGAGAAATTCAATGGCTTTACAACACAATTCTTATCCAACATAATATGCCTTTTCTTGTCATCTCCCTTGTTGCTGTGCTCTTATCTAAAAACCGagactataaaataaaaacattcaaatggaACATTTTTTTATGTACGTACTTTCGTGAAATGGGGATGAACTTTATGTCTTACTGTATGTCTACCTCAGGGAAGTGTATGGCTTTAAGTTGTCTTGCAAATGTGCCTGGATGAAGAATGTTTACATTTTGCTCTTGGTGCTGAAAAGCTCCACAAATCAGCAGTCACAACATGTACATTTTGCAAAGCTGTACAAAATAGCATTGATTGTTAAATCTTCAGACCACAATATTGCACTCACGCACCAGGAGGTACTGCCTTGTGAAAAACACAGCTTGAATTTCAAACACGAGAAGAAGCGCTCCAAATGCAAGATTTTGCTTAGACTGGAGTCAATCTCAAATGACACATTCAATTAACGAACAGCAATAAGCATCAAGCCAAAAAAAGGTATACGCACAtttgcacacgcacacgcacacatacattcacccacatatatatgtatatatataaacagcTGGCTTTTGTTATTTGACATGACTATCCATTACtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238944 True 3562 lncRNA 0.36 2 21151267 21154855

Neighbor

gene id symbol gene type direction distance location
trim32 trim32 coding upstream 449484 20696052 ~ 20701783 (+)
znf618 znf618,LOC101485385 coding upstream 653500 20458356 ~ 20497767 (+)
rgs3a rgs3,LOC102788614,LOC104953710 coding upstream 725866 20277287 ~ 20425401 (+)
hspa5 hspa5 coding upstream 884458 20262775 ~ 20266809 (+)
dnm1a dnm1 coding upstream 915260 20181745 ~ 20236007 (+)
lhx3 lhx3,LOC102793556 coding downstream 306271 21461126 ~ 21472938 (+)
LOC120544873 cunh9orf69,c14h9orf69,c12h9orf69,csgr02h9orf69 coding downstream 352625 21507480 ~ 21509631 (+)
LOC120545487 nacc2 coding downstream 358318 21513173 ~ 21543255 (+)
nup214 NA coding downstream 391979 21546834 ~ 21584572 (+)
LOC120545922 plpp7,LOC102795753,LOC103473848 coding downstream 446487 21601342 ~ 21610838 (+)
G176507 NA non-coding upstream 213975 20936806 ~ 20937292 (+)
G176477 NA non-coding upstream 648919 20500466 ~ 20502348 (+)
LOC120545557 NA non-coding upstream 651449 20497822 ~ 20499818 (+)
LOC120545553 NA non-coding upstream 710701 20437171 ~ 20440566 (+)
G176410 NA non-coding upstream 910051 20237527 ~ 20241216 (+)
G176559 NA non-coding downstream 242792 21397647 ~ 21399003 (+)
G176565 ak1 non-coding downstream 247059 21401914 ~ 21410459 (+)
G176644 NA non-coding downstream 500348 21655203 ~ 21655587 (+)
G176696 nop14 non-coding downstream 809241 21964096 ~ 21964825 (+)
G176702 NA non-coding downstream 816293 21971148 ~ 21971498 (+)
G176526 NA other upstream 204212 20946684 ~ 20947055 (+)
pappaa pappa other upstream 530481 20515347 ~ 20620786 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 1236587 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 1748888 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 2427482 18676021 ~ 18723785 (+)
G176753 NA other downstream 1124025 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 1341558 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 1377053 22531908 ~ 22537337 (+)
klhl8 klhl8 other downstream 1843398 22998253 ~ 23008834 (+)
G177094 NA other downstream 2027818 23182673 ~ 23184262 (+)

Expression


Co-expression Network