G176696 (nop14)


Basic Information

Item Value
gene id G176696
gene name nop14
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 21964096 ~ 21964825 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU239168
AAGTAAGAGAACagagtcatttatttattcctgTATGTAAGCACATTATATTGATGGATTCTGGTGGGAGAAAAGAAGAATGCAGACCAAGTATTCACTGCTGTGTTGACAAACAGTATCCGATCGTTGCATAAAACGACAACTTGGTGTGCATTTCTGACAGCCATTTGTCACTAGAAAATGCGTGTCGCGACAAGGAAGTTGAATTGATCCCATCTATCGATTAAAAACGATCCATAAAAGTACAAAACAGTTCCCGGTTCCACAAATTTCAACCTTGTACAGTCTGTTATCCACATCTGGATGGCAGATGTCCATTTGACAGGGAACGGATGATGGAGAGAAGCGATGAAGACTGAGATTCTGTATttcacttcctcttcctcctcttcaggGCCTTCCACTCTCCCTCCTGAGTGGCCAAGCTGCCAAAGAGCTCCCtcactttcctctttctctccgaATCTCTGTTCATGACCTCATTCAGCTTCTCTCTGGCCAGGAATCTCGTGTCCTTCCTGATCTCCCTCAGAGCGCCCTTGAATTCCTTCTTGTATTTGTGCTGCagtcgctccctctctctctcctctctggtgCTGCCACGCTTCTTTCCATAGTCCAACCTGACAAATATTAAAG

Function

symbol description
nop14 Acts upstream of or within hematopoietic stem cell differentiation. Predicted to be located in nucleus. Predicted to be part of small-subunit processome. Is expressed in several structures, including alar plate midbrain region; digestive system; nervous system; optic vesicle; and solid lens vesicle. Orthologous to human NOP14 (NOP14 nucleolar protein).

NR:

description
PREDICTED: nucleolar protein 14, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239168 True 639 lncRNA 0.45 2 21964096 21964825

Neighbor

gene id symbol gene type direction distance location
LOC120545760 snca,LOC104940963,LOC100691213,LOC101468074,LOC107374679,LOC103142753,LOC102228921 coding upstream 1431 21950258 ~ 21962665 (+)
rad23b rad23b coding upstream 101961 21853828 ~ 21862135 (+)
znf462 znf462,LOC103359970 coding upstream 119038 21795637 ~ 21845058 (+)
tmem38b tmem38b coding upstream 222065 21729671 ~ 21742031 (+)
edf1 edf1,LOC106563255 coding upstream 308945 21651855 ~ 21655151 (+)
sema4d sema4d coding downstream 48110 22012935 ~ 22054041 (+)
shc3 shc3,LOC102305817 coding downstream 91215 22056040 ~ 22086981 (+)
ctif ctif coding downstream 203553 22168378 ~ 22227884 (+)
rad1 rad1 coding downstream 404342 22369167 ~ 22372791 (+)
dnajc21 dnajc21 coding downstream 412288 22377113 ~ 22384622 (+)
G176644 NA non-coding upstream 308509 21655203 ~ 21655587 (+)
G176565 ak1 non-coding upstream 553637 21401914 ~ 21410459 (+)
G176559 NA non-coding upstream 565093 21397647 ~ 21399003 (+)
G176542 NA non-coding upstream 809241 21151267 ~ 21154855 (+)
G176507 NA non-coding upstream 1026804 20936806 ~ 20937292 (+)
G176702 NA non-coding downstream 6323 21971148 ~ 21971498 (+)
G176703 NA non-coding downstream 6813 21971638 ~ 21971985 (+)
G176704 NA non-coding downstream 7284 21972109 ~ 21972443 (+)
G176723 NA non-coding downstream 92862 22057687 ~ 22057895 (+)
G176752 smad7 non-coding downstream 312869 22277694 ~ 22294584 (+)
G176526 NA other upstream 1017041 20946684 ~ 20947055 (+)
pappaa pappa other upstream 1343310 20515347 ~ 20620786 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 2049416 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 2561717 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 3240311 18676021 ~ 18723785 (+)
G176753 NA other downstream 314055 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 531588 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 567083 22531908 ~ 22537337 (+)
klhl8 klhl8 other downstream 1033428 22998253 ~ 23008834 (+)
G177094 NA other downstream 1217848 23182673 ~ 23184262 (+)

Expression


Co-expression Network