G176974


Basic Information

Item Value
gene id G176974
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 22893156 ~ 22933645 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU239531
TTTTTACATACACAGTTCctttaaaatgttgtgtttacagtaacAGCTTTcagtacatttttttctttttcttttagcatttgttttgactttatTTGAAACGCCATAGCCTGAAGCTTTGAGATCAGCGTGAAACAGatacaatttattttctttttttcaacctgaCAATGTCAAAAGAATGATTCATTAAAACAGCACGGAGTAAAAGAAACAAGAGAGAAGGAATCGTAAAGGAATTGAAGAACAACACCTGATTCAGATGAGCTATACAGGGATTCATCATTGTAGAGTTCCACATTTTAATCATCCACATTTAAACATGTTAGCGTCACCCGACCCTTGCAGTAGCTTGCCTCCCTGTCTGAGTGCAATAAAGTGTTTATTGCATTGTTGGATTGTTGTTATTTACAATATGACTTGAGAGAAAAAGGTGAAAATTAATAAACTGGGGGTTTCAACTACTGAGTCCAAAGATTTTATGTTGGCACAGCTGAGTATAAGATGTATCCTAACTTCTGACTTTATATTGGCAAAACATTATGGCTGAATGACAAGTCAGCCATCTTGAGATTAGAAATGAATGGCATGAATTTGGCTAAATCCTGAATCGACAAGAGATAATTTCAAATCCCTCGTAACAAAAATTAGGATCAGGATTGGTAGGAGACACAATTCTAAATTCTAAAGTTTATGTGACTAAACGTGAATACACACATGAACTACTTCCAAACACACAACTGTACCACCTCGCCATCAACATTCGTAAAAGCAATCTCACAAAATCCTGTATTGAAAGAAAGAtgtgaaaacatgaactgttgGATAATCTGTCCAGATTGCCAGATCACATCTTCCAATTCAACTTTACAGACAGTTTGTGTTGAATGCTGGTTCATTTGAAATCACACACACTAATGACAAAGCAGAGCAGCAATGGTGTGAGTGAAACAATTCATTTCTACATTCAGTGCTGACAACCCAGCTGTTAGAAATCATCTCAAATTCAGGCGCATTATACAGAACCAAAAGCACCTTTTTTATTACAGCATAATTGTCTGGAGGGAtgtctttataaaaaaagatcacattcagagaaagacaaagaaaaaaggatGTTTCAGTATTTGTACTTGAGAAGAAGAATGCAGTTGGGATGGGTAAGAATGCCCTTGCAGCAATGACTGCAACAGTGTTGTGATTATATGTGGTTGTAGGAGTCAACTTAAAACACTTAGACCCCTTTGTGAAAGATTCAACATTTTCAACACACAAAGAATTTCAAAGTTGCACcctgtttttttaaaagattgcCCTGGCCAGACCCTGAACAGAAAGCCGATCTAGCCGTCACTTATTCTGGAGACGCCACCCTCAGTGACCCTCTGTGTCAGGTACTGTAAGTCTGTGTGTGGTTCACTGTACACAAGCCAAAGGCAGAAAGAGTGTTAACAAAGTAGCCATTAGAAGTTatgtatatcattttttttcggGGAGGGATTTTGAGACATTGTATGTACATGGACAGGGTGCTTTAGGAAGACTCCATGCAGAAAGGAAACCACTGTGCTGTAGCAGCTGAACCGGAGATTACAGTTAGATGTGAGGTGTCCACTTAAACACTGCTGTCATTACTGCTCAATGATGTAACAATGTCACGACTGGGATTGAACGTTTAGTCTAAACTAGTGGACATATGAGCCATGCAATTTCCATAAGTaggaaatattttaaaaagttgttgttttgacGTGCAAGAAACAAACACAGATGTCTGTGTTTGATTCATCAAGGGGCAATAAGCATCCTTGAGTGTCTAGAAACCTTATCTTTGTATGTTGTCAGTTACCTGATTGTCAAGTGATGACAGGTAATCCAATTTTTATGCATAAAGCAAGTAGTAATCTGTTTCTCACACAAACACTAGAATGTCTGTCCATCTAACAGCTAAAAATGTTTATTGAAGTTATTTCTTTGCTGGTAAAATTTGATTTCTCAACCCAACTTCTGTTAATGGTTCTTTGCCCATAAACCCACACAACCTGCCTGAGAACATGGAATATGACAGTGGAAACCAAGGTGATGGGAATTATATAACTAAGTataaacaacacatacacaaactaaTAAACATGTTATACTGTAGATCACCTGCTTCTCGTtggattgtattttatttaaagcatgAGAAGAATGCTGCAGTAAAacataaattaattaatgtagctaaaatgttgttgttgtgagcAGTGATTAAGATGGACATCAGATGGCCTTGGCTCTGGGTGCAATATCAACGATTGGATGTGACCTACAGTAGTGGGCTGTAACTGGACGATGTCCCAGTTTGAGAAAATCTGGTCACACTATTTCATAGAGATTCAGTTATAAGTAGAAATTAAATCGTTATGGAAAATGGCAGAAAACCTTTCATGTTGTGCAAAAACTAGTATGAGCATACGTACGTCTTAAGCCATACAATCTGAAGAGAGCAATTTGATTTCACACCACAAAATGTCACTTTAGAAACTTAAGTGAAAGCGCCAACATCTGGCcaaactgtgtttttcttccttAAATGTTTCCACCAACGTTGGTGGCTTGGGGATTCAGACAGTTTTAAggcagaaaaagaagaagcagagaaaaaaataaccaaaaaaaatatataatttctgCACTTGCAATGCTTCATTCCAAAAGGCACTTGCCATATTCAGGTTCCAtctatcaaaataaataaataaataaataaatcttccaCCTAAGAAATAATGTAGTTAACATAACTGTTGGGTAGCCTCTATCCCAGatcctttttttcctttattatttattacttttgtgTAGTGTGTGGTAAAATGAGTTTACTTTAGAACAAAAAGATACATTGCTACGAGGTTAACACTCATCGCCCGCCTTTAATCTACCTGCTGTATCATTTGTATCTCTTTCTAAAAGCCTTCTATGTTTCAGACAGTCAAATAAATAAGTAGCATCTCCTGGTGGCAACACCACAGTGAAACAGACCAACCTCCTGTACCTATGAGGGGTTAATGGTACACAATGACATGCAGGGCTGTGGGCCAGTCCGTGGGGTGGTGGAGGGACCGATCATACACTGCCAGGAGAAATAAAAGGGACATTACACACAAATCAGACTTTTTAAACCCCTTTTTAAAGGCCATTTTATAAAGTCTGAAAAcaatcaaaataatttatttgagAGTGTACTGACGCTTTAAGTCCCAAATTCAGCCCTGACATTTTACTAATGTCTTAATGGCTtggtaacaaacaaacaaacatacacacgcacacacgcacgtgcgcacacgcacacacatacacacacacacacacacacacactcactcactcactcgtCCTATTCTACGACCAGACCCCCCTTGTCTGGAGTTGAGTTAGTTTACATCGTATATAAACAAAAGTCTTTATTCAGACTCATTTTAGCATACAGTGAGATTAGCATTGTTTTAAATCTAACCATGCAGGACTACAGCAATAGGTAGGGGCAACTGAGGTGGAAAGCAGTGATGTGGCAAGGTGCGCTAGTCAAGAAATAAACTCCCAGTGTACTGGCCGTCAGTCCCACTCTGTGTGCCCTTCAGCTGTACAGAATTACATTATTTACAAGTAGCGCCGGGAGCGCCGCCCTCTGGGTGAGAGCGACTACATATCCCTGCAGAATaaccacataaaaacacacacatcaggcAACCTTACAATGGGGATTGTGTTGGGTGGGGATTGAGGATGTCTAAGAGGTTAAAATACAGCAGTGCCATTACATAAGGATTGGATAAGGGAAAAGGGGAAAGGAGAATGTATTGTACAGTAGTGATGAGAAAAAATGGCAGCCCACCTTGCCACAATGATTGGAGCATAAATGCTTTTGTAAGGAATTGTGAGACCTGCAGCCCGCCAATATGCACTTTACAGGAGATGCAAGTCAAAGCATTTGGTCGTTTTGTTTGGATGCCATATACATGATATGTGGGTAATATAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239531 True 4032 lncRNA 0.38 2 22893156 22933645

Neighbor

gene id symbol gene type direction distance location
arhgap24 arhgap24,LOC102789489 coding upstream 633 22824300 ~ 22892523 (+)
esm1 esm1,LOC102788147 coding upstream 79010 22812118 ~ 22814146 (+)
nedd4l nedd4l,LOC107584553 coding upstream 421608 22423582 ~ 22471548 (+)
dnajc21 dnajc21 coding upstream 508534 22377113 ~ 22384622 (+)
rad1 rad1 coding upstream 520365 22369167 ~ 22372791 (+)
ptpn13 ptpn13 coding downstream 3059 22936704 ~ 22984920 (+)
LOC120545187 NA coding downstream 51559 22985204 ~ 22989316 (+)
sdad1 sdad1 coding downstream 56509 22990154 ~ 22996841 (+)
LOC120544950 LOC103473489,LOC103142714,LOC106917991,LOC106959058,LOC108231074 coding downstream 81482 23015127 ~ 23036096 (+)
LOC120545462 ppef2,LOC103366113 coding downstream 140925 23074570 ~ 23088410 (+)
G176908 NA non-coding upstream 145830 22747108 ~ 22747326 (+)
G176906 LOC107085810,LOC102226223,LOC103473886,LOC106958946,LOC106918003,LOC105921164 non-coding upstream 178659 22713906 ~ 22714497 (+)
G176905 hcn1,LOC108278484,LOC106958946 non-coding upstream 187032 22705726 ~ 22706124 (+)
G176904 hcn1,LOC104948050,LOC106560798,LOC107749006,LOC107662227,LOC103390262 non-coding upstream 231338 22661584 ~ 22661818 (+)
G176903 NA non-coding upstream 238331 22654610 ~ 22654825 (+)
G177039 scarb2,LOC104955650,LOC107395254 non-coding downstream 170997 23104642 ~ 23116716 (+)
G177043 NA non-coding downstream 201004 23134649 ~ 23134887 (+)
G177079 NA non-coding downstream 208084 23141729 ~ 23141935 (+)
G177089 NA non-coding downstream 232914 23166559 ~ 23171678 (+)
G177091 NA non-coding downstream 238607 23172252 ~ 23177502 (+)
G176870 cplx4 other upstream 355819 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 368751 22496413 ~ 22524405 (+)
G176753 NA other upstream 610993 22278880 ~ 22282163 (+)
G176526 NA other upstream 1946101 20946684 ~ 20947055 (+)
pappaa pappa other upstream 2272370 20515347 ~ 20620786 (+)
klhl8 klhl8 other downstream 64608 22998253 ~ 23008834 (+)
G177094 NA other downstream 249028 23182673 ~ 23184262 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 507338 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 789833 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 790521 23724166 ~ 23724245 (+)

Expression


Co-expression Network