G177079


Basic Information

Item Value
gene id G177079
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23141729 ~ 23141935 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU239683
ATCTTTGACATGGGAGATAGACTAATCAACATCAACCAGCTGGCTGAAGATTATTCACCTGACTACATTTCAGCTCTTCGGTAGCGGTTTTTGGCACGGGCGAAGTGGGAattttttcatgacacatgGGGCAGCAccactgacatatataaaatggaccaacagagcctgttgctctggacggagaccagtgaaggctattagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239683 True 207 lncRNA 0.46 1 23141729 23141935

Neighbor

gene id symbol gene type direction distance location
LOC120545462 ppef2,LOC103366113 coding upstream 53319 23074570 ~ 23088410 (+)
LOC120544950 LOC103473489,LOC103142714,LOC106917991,LOC106959058,LOC108231074 coding upstream 105633 23015127 ~ 23036096 (+)
sdad1 sdad1 coding upstream 144888 22990154 ~ 22996841 (+)
LOC120545187 NA coding upstream 152413 22985204 ~ 22989316 (+)
ptpn13 ptpn13 coding upstream 156809 22936704 ~ 22984920 (+)
amacr amacr coding downstream 13903 23155838 ~ 23165201 (+)
slc45a2 slc45a2 coding downstream 27552 23169487 ~ 23202930 (+)
nxnl2 nxnl2 coding downstream 81752 23223687 ~ 23226613 (+)
csgalnact1a LOC102302787 coding downstream 87902 23229837 ~ 23259542 (+)
plpp1a plpp1,LOC102797153 coding downstream 121537 23263472 ~ 23277088 (+)
G177043 NA non-coding upstream 6842 23134649 ~ 23134887 (+)
G177039 scarb2,LOC104955650,LOC107395254 non-coding upstream 25013 23104642 ~ 23116716 (+)
G176974 NA non-coding upstream 208084 22893156 ~ 22933645 (+)
G176908 NA non-coding upstream 394403 22747108 ~ 22747326 (+)
G176906 LOC107085810,LOC102226223,LOC103473886,LOC106958946,LOC106918003,LOC105921164 non-coding upstream 427232 22713906 ~ 22714497 (+)
G177089 NA non-coding downstream 24624 23166559 ~ 23171678 (+)
G177091 NA non-coding downstream 30317 23172252 ~ 23177502 (+)
G177093 NA non-coding downstream 38765 23180700 ~ 23181267 (+)
G177169 NA non-coding downstream 188215 23330150 ~ 23331248 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding downstream 189963 23331898 ~ 23335577 (+)
klhl8 klhl8 other upstream 132895 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 604392 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 617324 22496413 ~ 22524405 (+)
G176753 NA other upstream 859566 22278880 ~ 22282163 (+)
G176526 NA other upstream 2194674 20946684 ~ 20947055 (+)
G177094 NA other downstream 40738 23182673 ~ 23184262 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 299048 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 581543 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 582231 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 584039 23725974 ~ 23726052 (+)

Expression


Co-expression Network