G177170 (golph3,LOC103364537,LOC106962713)



Basic Information


Item Value
gene id G177170
gene name golph3,LOC103364537,LOC106962713
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23331898 ~ 23335577 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU239793
AGGCACTTAAAGGATCCTTACTTTATTTTGTGTGGTAATACAAAAGCATACAGAATTATAGAGGATAGGAGAGAAGATCCCTTTCATTGAATTCCATTAGATCATACACGTAAAATGACTAATTACATACAAGCCTTTTCTCTTTAGCTACATCCACAAGTACCCCAGCCCTCCACCAATAGCATGCATGGTCTCTTTGCTCTAAACAAATCTCTAAAGTTCTTCATACCTATTGGTATTTTgttggtagaaaaaaagaagacagaacTAGAAGTATGCCATGAAACAATAGGTGATGTAACTTCACACACAGATCACAATCATTAGACCAGAATGTTTACAGTCGTCCATTTATATTGAAGCGTTCCCAGATCTGCACTGAATCATGACTGGAGACAGTTTTTGTTCCAATAGATTGAATGTTGTTGAAAAGTTTCAGTCTTTAACAACGATTCATCTGGGGGTCCAAGTAACCTACCCATCATCTGCAtgtaggaaaaaaatataaacatgccCCGCATGGGCCTATCAGATAGAAATAACACCTAATTATGACATAACATACAAACTGAGAGATACAATGTATAAGATCGAAACTTTTAAGTCGGTTCCCCTAAATTACATAACACATTGTCTCATTACTTCTGTTGGTATGTAGAGAATCCTCAGATCATGCGGTTATCAGATTTCATAGGGGCAATCTCTTTCATGTAAAGTAGTTCTAAGAAAAACAGTTTACAGTCAAGATTGTAGATTAGTGGGAAACTCCAGAAAGAGATGATGCTTCTGAATTTTTACTGCTGATGACCATCTTAAAAGGAAATGCCATTTACCCTCATTGTATTAAGACCGGGGCAAATATCTCTGGGACATATTTCAGAAcctaaataaaaccaaaattacCTCCATGACTAGATACCACTAGTGTCAAGTGAGAATAAACgagaataaactaaactaaactaaactagccCCTTTGGCTAACATTTCCCACCCTATTTGTATAAGCAAATGGGGATGATCTATAGTAAATCTTGCGTAGGCTGCTCACAGCGATCCAAATCACAAcggatttatttttatatctCAATTCATACTTAAAAATATGAGTAGATGTTTTTTACATGTCCAGAGGAATGATTTTAAAGTATTCGTAAAGATCAATAGTCATATACAAAACAAGTGAGTTTTTTTAACCATAGATGCTAAGGTTCATAATCTTCAATCTCATCAAGTGTGTTACTCAACCCAAGAAAGATCCCTAAAAGTACGATCCTACCTACATGGCTATTGACTGTGCAAAATAGTTGATAAATGGCAGGCTACTCCAAGCATTGATTAGCAACATAAATAGAAATGGAAGACTAGTCTCATTCTATGAACACAGAATGGACCCATTGCAACTAAAAATATAGAGTTTAATTAGACTCAAGGTTTAATTCTTCATTTAGGTCAGAAGCTATGAGGGCCAAATTACCCAGCTCACTCGTAATTATGCAGGCGATCAAGTGTTTGTGTCCTCCATTGTTCCTCAAAATGTAATGACGAAGAAAGCAGGACATTTTATGAAATTGAATGAGAAGACAAAGTGACTCAGTAAAACGTTCAGGTAGTCTATTCTAACAGTAACCCTAAAGCATGTACTCCCACCACAAGAGGGAATGAATAGGGGGAAGCAGTAGACCTGCATGGGTGCAAAGAGCATCAGTAGCAGTGTGACTTGCTATCCTTTATCCTTGCATAAGCATGTGGGAGAGTATGGAGACGAGACCAGGATTTGATTCTGGCCCGATCTTGTGGTAATGTAGAGATGATGTTTCCATAGTGAAGAAGGTAAACTTGGCCCCAGTCAAAATCTTCATATTCACCATGACTACTGCTGCTACCTGCTCTGTTCTGATGTCATCTAACATTAACAGAAACCCATCTGTTCGTAGTGTTGACAAGAATATCCAGCCTCGCAGCAGCAGATAATATACCTCACTGTGTGAAAGCAGCCAGTCTTTTTTCATTAAGAGACTGTTCCAACCAACCAAATGTTACTTGGTGAAGCCCACCACCAATTAGACTGCAATGGGTTAATATGGACTGCCACCAAAAATGTCATCCGGAATAGATGTTCAAACAGGCTCCCCAACCAAAAAAAGATTGTCTCATTTAAGTGAAGTCTGTCTCAATAAGTGAAGTCCTTCAACCAATTAAATAACACAGACCATAGCCAGATCTTCCAGTCCATCGTACAGGTGTTTTCATTTAGTAAATGCAGCCACAACAGCCCACATAAGTTCGTTGACGTTGGGCTTTGTGCTCTCTTTCTCCGGCTCCAGCTCCAGCAGGGTGTGGACTCTCTTCATGCCCAGGTCGTACTGGTCGTCTTGGAGTGGGGCGAAGGCATTCTCAAGAACGTCGGATGAGTGGGCCAGAAGGATCAGGGCCAGCACTCGCTTGTCCATGCGGTGGGGATCGTTGACCCACTTCTCCAAAACGGACTCCTGGACCTTCTTAACGAGGCGCTGTTTTATGGTGCTGTTTGTGAGCGGATGTGTGGTCATGTCAAAAAGCAAGAAGTTCTGTTTCTCTGTGGTGAGGACACCTTTCTCTACCAGGTTTTTTGCCAGACGTTCTCTAACATTTCTCAGCTGGTAGTGCAGCTTCAGGGGATTCCAGGTTTCTCCTAATGGACAGCATGAGATCCATTTAGGACTTTAAACACACTGATACAGtcattgtcattttttaaatatctgaaGTTGGATCATTTTAAAACTGTAAATGCCGCTGCTTCCAACTTATTATTAaaatttgttttaatgttgttCATGACAATCCCTATAAACTATGACATCATCACCGAACACTTCCTTGTCAAATGATGCACAATTTGAATCAAG

Function


symbol description
golph3 Enables enzyme binding activity and phosphatidylinositol-4-phosphate binding activity. Involved in several processes, including Golgi vesicle transport; cell adhesion molecule production; and cellular response to rapamycin. Located in Golgi apparatus subcompartment; cytosol; and mitochondrion.

NR:

description
PREDICTED: Golgi phosphoprotein 3-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU239793 True 2891 lncRNA 0.40 2 23331898 23335577

Neighbor


gene id symbol gene type direction distance location
dhx29 LOC103364531 coding upstream 19367 23301589 ~ 23312531 (+)
plpp1a plpp1,LOC102797153 coding upstream 54810 23263472 ~ 23277088 (+)
csgalnact1a LOC102302787 coding upstream 72356 23229837 ~ 23259542 (+)
nxnl2 nxnl2 coding upstream 105285 23223687 ~ 23226613 (+)
slc45a2 slc45a2 coding upstream 128968 23169487 ~ 23202930 (+)
itga1 itga1 coding downstream 20646 23356223 ~ 23406309 (+)
kcmf1 kcmf1 coding downstream 71795 23407372 ~ 23417210 (+)
LOC120545384 LOC104922461,LOC103364542 coding downstream 123183 23458760 ~ 23470507 (+)
LOC120545381 LOC103364544,LOC103364545,LOC100697171,LOC104922463 coding downstream 136677 23472254 ~ 23492497 (+)
zgc:73226 LOC102294317,LOC100705876,LOC101475642,LOC108230926,LOC103357984 coding downstream 241992 23577569 ~ 23583588 (+)
G177169 NA non-coding upstream 650 23330150 ~ 23331248 (+)
G177093 NA non-coding upstream 150631 23180700 ~ 23181267 (+)
G177091 NA non-coding upstream 154396 23172252 ~ 23177502 (+)
G177089 NA non-coding upstream 160220 23166559 ~ 23171678 (+)
G177079 NA non-coding upstream 189963 23141729 ~ 23141935 (+)
LOC120545237 NA non-coding downstream 730 23336307 ~ 23347393 (+)
G177177 NA non-coding downstream 89267 23424844 ~ 23426902 (+)
G177244 NA non-coding downstream 200306 23535883 ~ 23536398 (+)
G177284 NA non-coding downstream 337685 23673262 ~ 23719373 (+)
LOC120545825 NA non-coding downstream 599270 23934847 ~ 23935801 (+)
G177094 NA other upstream 147636 23182673 ~ 23184262 (+)
klhl8 klhl8 other upstream 323064 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 794561 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 807493 22496413 ~ 22524405 (+)
G176753 NA other upstream 1049735 22278880 ~ 22282163 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 105406 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 387901 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 388589 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 390397 23725974 ~ 23726052 (+)
dnlz dnlz,LOC104941974 other downstream 819808 24155385 ~ 24157621 (+)

Expression



Co-expression Network