G177284


Basic Information

Item Value
gene id G177284
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23673262 ~ 23719373 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU239954
gggggggggggggGTAGGATCTGGGGTCGAAGTGGACGAGATCAGACAACATGCAAGAGCAAATCTAAAGTGCAACCACCACTGAAAAAATATGAGAGTTTATACCTTTCAGAGtaatgaaaaagaaagaggcATTCTTGGGTTTCTGTGAAAATACTAAAAATGCCTTCAAACTggcctaccttttttttttcttcttaatatCGGCTAGGCAGGGTGTGACTATTACGGAGATCTGTGAATCTGGCTGAAAATTCTGACGGAAAcatctgtcaacatgcagacaGGTTAAGTTAGAGTTAAATATGTGTTGAAGTCCACCCCTGCTAACTTACTCAACCTGCAGATTTCAAAACAAGTagagcaaaaaaaaagtgtacatGTGCTGCAGCTTCTATTCTCTCTAAAGCATCTGAGTAAACTGCTGTGCGTAACAGCGGCCCAGGCCACACATGCAGGGCTGGGTCATCACATGTATTTTAAACTTGTGttctctttcactcactcactctctttcgttctctctctctctctctctctctctctctctctctctctctctctctctctcactccctttCTCAGAGGTGTAGTGCAGTCAGTCACGCTGGAAAGGTACCTTTTCCTTCCATTTCTGGCAGACTTCAGAGATCCATCATCCGAGAAATTAATGGGACCGGTCCAATTTCCTGTCTCGTCCCCTTTGAGTCGGCTAAACTGTTGCGCACTAGTAAGAAAATGAGTCAGTTTATTTGGGATTTAGTGTTCTTAATGTGCAAATGTCAAACACATACAACCCAACCAATGTGTTCACTCATAAAACTCAAATTTGCAcattctctctcaaacacacacacacacacatgcacacattaaGGGGACCAGCTTTTTGGCTCAAGAAAAACAAGTCAAAGTATGGCACCAGACATGGTTAGAATGGATTCCTTTTTAATGGTAATGACGTCATGGTTTAAATGCTGGGCTGTTGCCAATATGCTGAGTGTGATTCAAACATTCACACTGTAATATTGGCAAGCGGAAGTGTTTAGACTTTTAGTTCAATATATTGAAGCCACAGTGATTTAAGGGGGAACAATAATAGTTGCCaacgtttatttttatttttacctttatttattcagggaaaggttcactgagaggaacACAGGAAcaggaacaccctgatcacatgcacacagttacacatgcatacctggaagctgcccagtacaaccacagtctgatctgctggccactgagcaactctactggtagttggggttaagggccttgctcaagggcacctcagtggtggtaatgagggagggacaagtgctgctctttcactttccccacccagattttatatgaaccgacgacctcccggtcacaagctcgcttctctaacctttaggccaccactgccccatAATGTTGCTGTGTGTCAAATTACTGCTGAGGAAGAGATGCCAACAACAGACTTGCCAACAGATTCAACAATTTATACCATATTTTCAGCCAGATATTACTTTTAAAGGTGATGTGTCTAAAAGACGCTCGTGGCTGCATTACCGTAAATGTAGTGCTGTGTTTTTTACTAGACAGGATATCTTGGCCTATGTTGCATCAGTTTTCACTATAATCATCACAGTGAATTTATCAGAGGAGGCCATTTGGTGCAGGTTGTTTATAAAGCACTCATACTTACTGTAATGAGAATCTTGTGCATTCTAACAAATCTTTAGAGAGATAAGGGGCATCAGTATTTTCAGAGCCTGTTTTCAGTAATGTAATCTTTTTGGGTTTAGTCTCCTTACGGGAGAACAAGGTGAAACTTAAACAATATCAAGccttcaaaatatatatatatatatatattgtgtatttaaggtatggttagcaatattctacatttttgttattgtcaacaaatcccataaaaAGATCAAAACCAACAATGCATAACTTCGTTGGTTCCTTTAAGACATACATATAGTATATACTTCTATTCTTTAAAAAGGGCTCcgtaatttcctaaaacagctggacAGTGGACTGTATATCAAACATCATTCAAATAGAAGTaaattgtgtatttgtttgggaCTAGTTTCAGCCACAGATTTTGTGCGTTGGCTAGTATTTACAGAACTAGgatgatatactatactaccaTACTATTGTAATGAAGCAAAGAGTCACCTAGTGCAACTGTGTTTCTCATtcgtgtatatattttttttgacaaaaatggAGGCCTGTGGCACAGAGGAATGCATTACATCAGACTGTGATTatttttggttttggtcttttcatgggatttgtttacaataagTATCCTTTAAAATCAGTTCTACATATGAAAGGTTAGGAGTTTTTCAATGTGTGAACTGACAATTCACATTTTACATCTGAATATCAATGGGTGTAAAACTTCTCCCATTACTGACTGATTATTATGCAAGTATTCATGTGTGACTCATTTCTGAGAGTGCTCTGTGGGTGGTGTAATAAATTTAGCAGAGAAACTGAACCAGAAGAGCCTTTCTGGGTACATTATGTGATCGAGCATTCACCATTGGCGACTAGTGTCAATACTGATCTGCAGGCGCTTTCTCTGAGTGCCACTTCAACACCTCAATAACACTCTGCAACCAGCTGCATAAAAGAACATCCTAAAATCAGCCTTGGTTTAGGATGTGTCCCTAAAAGAGGACAGCTGTTATACAGAAAAGCTAATCAAACCAGAATGATTTAGTCGCTTATATACCATTAATCTTAATCATCACCAAAACACTATACCTATTAAAGCTTGACTTGATCAATATCACATATACAATACTGATATTTTCCAATAGTGTGGCTACCAACAAAACCCTAATCAATCTCATGTGACTACCACTGACTCACAGATCAATCCAGTGTTTTCAATTCAAACATTAAGAGTCAATTTATCTCCCATTGACTCAATTATGAGCCCAGTTCAGACAGTAATCTCAGCAGTAGATCAGACAAACAGActtttgtgtctgtttctgcCCTTGAGCGTTGTTAATGGTACTTGAAAGCAGCAAGGACTTTTATACTAATGGATTTTGTGACTTGGCTGGGTTTTAGGGTAGGCCTGGCACATTGACACACTGATGTCCATTTATTATGTCCAGGGGTATTTTCCTTTAACGACTAAGGGCTCCTTATTAACCTTATTGTCTTTATCAAAATAGGAAATGAAATGCTGTAATTTATGAAAACAGATTTGAGATCCTCTCAATCTCTTTCTTGTTTCCTTTTTGCTTTAACTTTTACCGGGGAACCACAAATGGTGTAACCACTGTGTCTTATAAATGATGAACTACTGGTTCCATGCTGCTACGTGTTAGAATCAATATATTCATACACAgccctgaaaaaaaagaaacacagaaacCTCTCAGAATAGCAGAGATACAACCCAAATACATGATGCATCAAGAAGGGCTCATAAACAGAGTCACATACAACATTAGACTGTATTTACTCTAAAGCCAACCATTTTGATAAtagtatttttttaagttatttatCAACCAAGAATGCCAAATATTTGCTGGTTTCTTCTCGAAACTTTGAGATTTTTCTGCCtttctttgttttaaataataataatctaaattgagtttatttttggttttggacAGTTGGTTAGACAAACTAGCAATTCTAGAATGTCATCTTGACCTCTGGAAAACTGTGAGAggcattttttactttttcttctgTTATATAGATATAGAATTATCAACAGATTAACTGACAATGAAGATAATCATTTGTTGCAATTGCAAAGCCACAATGTTTTTGGATGGTTCCTAACCAACCTGCTCCAGCCTGGAGCCTTTGGTGCTACTCTTTGTAGCTGAGAGTATTTTTAAATATCACCCTCTTCAAGTCAAATAGAGTTGAAAGTTAATATGCCTTCATTTGCAGAAGTGTGTCACTCACTGTGATCATTTAATAAGCTTCCCTCTTGAATCTGCACTGCCATTTTACAATCCTACATTCTCCGCTACTTCATCTTAATGTGAGTGAAGGCCGGCAGCGAGTCGATTCATGGGACTCTATGGAAACTGAATGGCCAAAATTATCAAGTACAACAATGTTCATGACTTGTCTGACTTTAATGGGTGTCCTCAGTTGACAGCCCTTTGCCCTTTAGTAATGTACGATGGACATATACACAAAGTAAGCTGATGTAAGATGTATTGATGAAATGTTATTTCCTCAGCTTTCTCCCAATCTAAGCACCCAAATGTCTCCTCTGCTACCGTTAGACACCTCTAGTAATTTGCaaagatgtttgtttttgttgccctGAAACACAAGAGCGCATGATAAACAGCCTGTCACCTTGTTCTTATGCTCAGGTTTAGCAGGAAAAGAGGCTGGGTGTGGTCGAACCCATGTGGACAATGATTTCTGGTTGTTTACGCTTGGAGAGATGTCATAAGATGAcgtcttctccctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU239954 True 4514 lncRNA 0.39 2 23673262 23719373

Neighbor

gene id symbol gene type direction distance location
rnf165a rnf165,LOC103473450,LOC102207811,LOC100695851 coding upstream 11057 23651723 ~ 23662205 (+)
c17h18orf25 clg7h18orf25,LOC102291905,LOC103357989,LOC101477080 coding upstream 27043 23638215 ~ 23646219 (+)
hwa NA coding upstream 42090 23628344 ~ 23631172 (+)
zgc:122979 LOC103357987 coding upstream 45182 23624110 ~ 23628080 (+)
LOC120545389 LOC103357986 coding upstream 54085 23611737 ~ 23619177 (+)
pdcl NA coding downstream 11545 23730918 ~ 23747392 (+)
LOC120545180 LOC103357997,LOC101480866,LOC102079280,LOC106633087,LOC102787376,LOC102204442 coding downstream 35362 23754735 ~ 23757305 (+)
notch1a LOC104924495,LOC103357999 coding downstream 70509 23789882 ~ 23813730 (+)
LOC120545788 NA coding downstream 95948 23815321 ~ 23840033 (+)
LOC120545057 LOC104952880,LOC103371326 coding downstream 169531 23888904 ~ 23889986 (+)
G177244 NA non-coding upstream 136864 23535883 ~ 23536398 (+)
G177177 NA non-coding upstream 246360 23424844 ~ 23426902 (+)
LOC120545237 NA non-coding upstream 325869 23336307 ~ 23347393 (+)
G177170 golph3,LOC103364537,LOC106962713 non-coding upstream 337685 23331898 ~ 23335577 (+)
G177169 NA non-coding upstream 342014 23330150 ~ 23331248 (+)
LOC120545825 NA non-coding downstream 215474 23934847 ~ 23935801 (+)
LOC120545826 NA non-coding downstream 216628 23936001 ~ 23936681 (+)
LOC120545017 NA non-coding downstream 249884 23969257 ~ 23971641 (+)
G177452 NA non-coding downstream 420045 24139418 ~ 24150168 (+)
G177487 NA non-coding downstream 681112 24400485 ~ 24400891 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other upstream 214657 23440983 ~ 23458605 (+)
G177094 NA other upstream 489000 23182673 ~ 23184262 (+)
klhl8 klhl8 other upstream 664428 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 1135925 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 1148857 22496413 ~ 22524405 (+)
rpl37 rpl37 other downstream 4105 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 4793 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 6601 23725974 ~ 23726052 (+)
dnlz dnlz,LOC104941974 other downstream 436012 24155385 ~ 24157621 (+)
G177596 map1b other downstream 983598 24702971 ~ 24711641 (+)

Expression


Co-expression Network