Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120545826 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053128.1 |
| NCBI id | CM020925.1 |
| chromosome length | 37416781 |
| location | 23936001 ~ 23936681 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU240106 | False | 380 | lncRNA | 0.47 | 4 | 23936003 | 23936681 |
| XR_005636749.1 | True | 382 | lncRNA | 0.47 | 4 | 23936001 | 23936681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120545057 | LOC104952880,LOC103371326 | coding | upstream | 46015 | 23888904 ~ 23889986 (+) |
| LOC120545788 | NA | coding | upstream | 95968 | 23815321 ~ 23840033 (+) |
| notch1a | LOC104924495,LOC103357999 | coding | upstream | 122271 | 23789882 ~ 23813730 (+) |
| LOC120545180 | LOC103357997,LOC101480866,LOC102079280,LOC106633087,LOC102787376,LOC102204442 | coding | upstream | 178696 | 23754735 ~ 23757305 (+) |
| pdcl | NA | coding | upstream | 188609 | 23730918 ~ 23747392 (+) |
| col27a1a | LOC104924507,LOC103371324 | coding | downstream | 53114 | 23989795 ~ 24063047 (+) |
| cdk5rap2 | cdk5rap2 | coding | downstream | 128261 | 24064942 ~ 24110814 (+) |
| dolk | dolk | coding | downstream | 192229 | 24128910 ~ 24131539 (+) |
| uck1 | uck1 | coding | downstream | 221005 | 24157686 ~ 24161621 (+) |
| LOC120545253 | LOC103390093 | coding | downstream | 387288 | 24323969 ~ 24394568 (+) |
| LOC120545825 | NA | non-coding | upstream | 200 | 23934847 ~ 23935801 (+) |
| G177284 | NA | non-coding | upstream | 216628 | 23673262 ~ 23719373 (+) |
| G177244 | NA | non-coding | upstream | 399603 | 23535883 ~ 23536398 (+) |
| G177177 | NA | non-coding | upstream | 509099 | 23424844 ~ 23426902 (+) |
| LOC120545237 | NA | non-coding | upstream | 588608 | 23336307 ~ 23347393 (+) |
| LOC120545017 | NA | non-coding | downstream | 32576 | 23969257 ~ 23971641 (+) |
| G177452 | NA | non-coding | downstream | 202737 | 24139418 ~ 24150168 (+) |
| G177487 | NA | non-coding | downstream | 463804 | 24400485 ~ 24400891 (+) |
| G177488 | NA | non-coding | downstream | 464441 | 24401122 ~ 24401327 (+) |
| G177493 | NA | non-coding | downstream | 467939 | 24404620 ~ 24405052 (+) |
| rpl37 | rpl37 | other | upstream | 208759 | 23723478 ~ 23727242 (+) |
| LOC120546141 | NA | other | upstream | 209949 | 23725974 ~ 23726052 (+) |
| LOC120546142 | NA | other | upstream | 211756 | 23724166 ~ 23724245 (+) |
| hnrpkl | LOC103364541,LOC100706673,LOC103155138,LOC103473466 | other | upstream | 477396 | 23440983 ~ 23458605 (+) |
| G177094 | NA | other | upstream | 751739 | 23182673 ~ 23184262 (+) |
| dnlz | dnlz,LOC104941974 | other | downstream | 218704 | 24155385 ~ 24157621 (+) |
| G177596 | map1b | other | downstream | 766290 | 24702971 ~ 24711641 (+) |
| zgc:63972 | cuta,LOC103373665 | other | downstream | 1308881 | 25245562 ~ 25305032 (+) |
| G177715 | NA | other | downstream | 1596451 | 25533132 ~ 25533689 (+) |
| G177759 | NA | other | downstream | 1893037 | 25829718 ~ 25849122 (+) |
