sh3bp2 (sh3bp2)


Basic Information

Item Value
gene id sh3bp2
gene name sh3bp2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 7479129 ~ 7522091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778808.1
ATGTATTAGGGGTTCAGAGCGCCAACAGACTTCCTAACTAACACGACTGATTGTTCTATCTCCCGGTCTATTTGAAGTCACTATTTTCATCTTTtactccatctttttttttttttcttcatttatctATCCTTGCTTTTCTTCCTTCCAAATCGAACCACCCCTTAAATCTCGAATCCGTGTCTTTATACGATTCTGCTCTCCATCCAAGCGTACATCCGTCCTCCGTCGGTCCACGCGGCTGAAAAGTATGGTGGTACATTGCGCCGTGCTGCCACCCTCATGTCCACCGACATGTCCGCCCTGTCCATGAGGAAGAACAAGTCGTTTGCGCGGAGCTGCAAGCCCAGCACCAGGATATGTACTCGGGAACACAGGGACGTCATAACCATGTCATCTCTGGAGATGTGCTGGCCGGTGCCGATGCGAGCCATCGGGGCTCAGAACCTCCTCACCATGCCGGGAGGAGTTTCCACTTCAGGATACCTCCACAAGAAGGGAGGCAGCCAGTTCAGCCTGTTGAAATGGCCACTGAGGTACATCATCATCCATAAGGGCTGCGTTTACTACTTTAAGAGCAGTACCTCTCCTGCACCACAGGGGGCGTTCTCTCTCAACGGCTACAACAGagtgatgagagcagcagaggagaCAACGTCCAGTAATGTCTTTCCTTTTAAGATCGTCCACTTCAGTAAGAAACACAGGACGTGGTTTTTCTCTGCAGCCAGCGAGGACGAGAGGAGGaaaTGGATGCGATACCTGCGAAGGGAGATAGATCACTATAACGACAGAAAAGATCCCCAGATTTCAAGTGACTCAGAGTCAGATGCCGACAGTTTCTATGGCTCCATTGAGAAGCCCATGGATATTAAGCACCCCTTCAATAACGCAGAAGACGATTACGGGGAGGATGATGACGACGATGACGATGAGCCAGACTATTTGAAGCCAGACGGCGACTGTTCGCCGACATCGACAGGTCGACCCGCGGGGCCGCCCCCCACCTACCCCCCTCCCCCAGTGCCGGCAGCATCCCAGCTCCGTCAAGACTCCAGTCCAGGTTTCCACAAAGGCCCGCCTCCTGCCGTCCCACCTCTACACAGAATCCCGACCAGCCCGCTCCCCAAAAAACCCCCGCCCTGTGTCCCCCCTCCCTCCATACTGAAGGACCCCAACAAAGGACCACCCcctcccctgccctttgccccCCACCTGCACAGGTCCATTTCCCCCACCccgccgcctcctcctccccccaacGCAAAGAAAACTCTTCAAGGCCGGGTGGCATCAGCGGGGGGGCCTGGGAACGATAAGAGAGACTGGAGGCCTGTGCCGGCCTTATCGGTCCAGACCCCCGCAACTCTGCCCATCTGTGACCAATTAGAGAGCAGGATGGTCCTAAATGGTCCCGCCCACCGCTCCCTTAATGCTTTGGGGAGCCAATCAATGGGCAGCAACCACCACTGGGAGACGAGCAACCACCGCAGCAAGCCGAGCCTACCTCCTCAGTTAAACGTTGGAGGGGCTAACCTCAGACCTGTGATGTCAGACGCCCCGTCACACAATAAGCCGCCCCCCGGTCACCCGCCACTGCCTGGTCACCCTCCACTCTCTCCTCTACTTAAAGCTGGACTACTAAATAAGCCGCCGGTACCTAAACCTCCTCTGCCAACATTGAAACCCCCGCTGCCTGCAGCCAAGTCCAAGCAGTCGGGCACACCACTTCAAAGAGCATCTCCAGACGGCCAGAGCTTCCGTTCGCTGGGAGACGAGACGCCCACAGAGTTCAGGAGGAAACGAGACTCGTCCAAACACAGCGGAGGAGACGACTCCGACGAGGACTACGAGAACATGCAGCTGCCAGACTCCGTGTTCATTGATACGACTGAATCCAGCTTCGTGGAAAAGTTGTTCAGAGAGAGCCCCGTCCCTCCACAGGATGGACTGTACGCCATCAGGAACTCAGGAACCAAAACatcaaagGTGCTGGTGGTGTGGGATATCAGTATAGCCAAAGCCAGAAACTACCGACTGTTTGAAGAGgcGGACTGTGTGTTTCTGGACAACGAATTCACCTTCCCCACCCTGGCAGCTGTGATCGAACACTACTACAGCCATCCGCTTCCTCACCACGGCTCGCTCTGCCTGCAGAAGCCCTACACAAAGGGCTTCTGATCAACACAGTCGATCGGAAGCAGAACGCAGCGTCAGGATGCGTCTCCGTCAACGACACGTGGAAATAATCTCGCTCGCGCAGACGAAATAGCGGATCGTACCGCTCACTGTTCAGTGGGAAAGATCTGCGGTTGCACCAGAATGCACAGCAAAGCTTCAGGTTAAACAGCAAGGACAGTAACTTTCTGACTGCTCGGACACCatggtgttgtgtgtgcaaCTTATGTCAACTGTAATAACAAgacgaagaagaaaaaaaccatTAGCAATTAACAGTTAATggaacattatttaaagtgctcatattatgcttttgggctttttaccctttactttattgtgttatatatattttttgtgcacgttataggtttacaaagtgaa
>XM_039778809.1
AgaagcagacagacaaaaaccCCTTCTCAGTTCGGATCAGATGAGACGCAACAGTGAACCCactgaggagagaaagagaaggagttTTTGGAGTCTGTCATGGACCTGCTGCCGCCGTTAGCGTCCACAGTGTTAGCCTCCGCAGTCAGCCTGCTGAGGGACAGCGCTGCTGTTCAGAGCATCACCCGGAGGCTCAACAGGAGAACCATGTCATCTCTGGAGATGTGCTGGCCGGTGCCGATGCGAGCCATCGGGGCTCAGAACCTCCTCACCATGCCGGGAGGAGTTTCCACTTCAGGATACCTCCACAAGAAGGGAGGCAGCCAGTTCAGCCTGTTGAAATGGCCACTGAGGTACATCATCATCCATAAGGGCTGCGTTTACTACTTTAAGAGCAGTACCTCTCCTGCACCACAGGGGGCGTTCTCTCTCAACGGCTACAACAGagtgatgagagcagcagaggagaCAACGTCCAGTAATGTCTTTCCTTTTAAGATCGTCCACTTCAGTAAGAAACACAGGACGTGGTTTTTCTCTGCAGCCAGCGAGGACGAGAGGAGGaaaTGGATGCGATACCTGCGAAGGGAGATAGATCACTATAACGACAGAAAAGATCCCCAGATTTCAAGTGACTCAGAGTCAGATGCCGACAGTTTCTATGGCTCCATTGAGAAGCCCATGGATATTAAGCACCCCTTCAATAACGCAGAAGACGATTACGGGGAGGATGATGACGACGATGACGATGAGCCAGACTATTTGAAGCCAGACGGCGACTGTTCGCCGACATCGACAGGTCGACCCGCGGGGCCGCCCCCCACCTACCCCCCTCCCCCAGTGCCGGCAGCATCCCAGCTCCGTCAAGACTCCAGTCCAGGTTTCCACAAAGGCCCGCCTCCTGCCGTCCCACCTCTACACAGAATCCCGACCAGCCCGCTCCCCAAAAAACCCCCGCCCTGTGTCCCCCCTCCCTCCATACTGAAGGACCCCAACAAAGGACCACCCcctcccctgccctttgccccCCACCTGCACAGGTCCATTTCCCCCACCccgccgcctcctcctccccccaacGCAAAGAAAACTCTTCAAGGCCGGGTGGCATCAGCGGGGGGGCCTGGGAACGATAAGAGAGACTGGAGGCCTGTGCCGGCCTTATCGGTCCAGACCCCCGCAACTCTGCCCATCTGTGACCAATTAGAGAGCAGGATGGTCCTAAATGGTCCCGCCCACCGCTCCCTTAATGCTTTGGGGAGCCAATCAATGGGCAGCAACCACCACTGGGAGACGAGCAACCACCGCAGCAAGCCGAGCCTACCTCCTCAGTTAAACGTTGGAGGGGCTAACCTCAGACCTGTGATGTCAGACGCCCCGTCACACAATAAGCCGCCCCCCGGTCACCCGCCACTGCCTGGTCACCCTCCACTCTCTCCTCTACTTAAAGCTGGACTACTAAATAAGCCGCCGGTACCTAAACCTCCTCTGCCAACATTGAAACCCCCGCTGCCTGCAGCCAAGTCCAAGCAGTCGGGCACACCACTTCAAAGAGCATCTCCAGACGGCCAGAGCTTCCGTTCGCTGGGAGACGAGACGCCCACAGAGTTCAGGAGGAAACGAGACTCGTCCAAACACAGCGGAGGAGACGACTCCGACGAGGACTACGAGAACATGCAGCTGCCAGACTCCGTGTTCATTGATACGACTGAATCCAGCTTCGTGGAAAAGTTGTTCAGAGAGAGCCCCGTCCCTCCACAGGATGGACTGTACGCCATCAGGAACTCAGGAACCAAAACatcaaagGTGCTGGTGGTGTGGGATATCAGTATAGCCAAAGCCAGAAACTACCGACTGTTTGAAGAGgcGGACTGTGTGTTTCTGGACAACGAATTCACCTTCCCCACCCTGGCAGCTGTGATCGAACACTACTACAGCCATCCGCTTCCTCACCACGGCTCGCTCTGCCTGCAGAAGCCCTACACAAAGGGCTTCTGATCAACACAGTCGATCGGAAGCAGAACGCAGCGTCAGGATGCGTCTCCGTCAACGACACGTGGAAATAATCTCGCTCGCGCAGACGAAATAGCGGATCGTACCGCTCACTGTTCAGTGGGAAAGATCTGCGGTTGCACCAGAATGCACAGCAAAGCTTCAGGTTAAACAGCAAGGACAGTAACTTTCTGACTGCTCGGACACCatggtgttgtgtgtgcaaCTTATGTCAACTGTAATAACAAgacgaagaagaaaaaaaccatTAGCAATTAACAGTTAATggaacattatttaaagtgctcatattatgcttttgggctttttaccctttactttattgtgttatatatattttttgtgcacgttataggtttacaaagtgaa
>XM_039778810.1
GTTCTGCAGGGCTCAAACCACTgatgacacaaacacagacagaggagCTACACAGCTGACACAGCACTCCATGGAACCATGTCATCTCTGGAGATGTGCTGGCCGGTGCCGATGCGAGCCATCGGGGCTCAGAACCTCCTCACCATGCCGGGAGGAGTTTCCACTTCAGGATACCTCCACAAGAAGGGAGGCAGCCAGTTCAGCCTGTTGAAATGGCCACTGAGGTACATCATCATCCATAAGGGCTGCGTTTACTACTTTAAGAGCAGTACCTCTCCTGCACCACAGGGGGCGTTCTCTCTCAACGGCTACAACAGagtgatgagagcagcagaggagaCAACGTCCAGTAATGTCTTTCCTTTTAAGATCGTCCACTTCAGTAAGAAACACAGGACGTGGTTTTTCTCTGCAGCCAGCGAGGACGAGAGGAGGaaaTGGATGCGATACCTGCGAAGGGAGATAGATCACTATAACGACAGAAAAGATCCCCAGATTTCAAGTGACTCAGAGTCAGATGCCGACAGTTTCTATGGCTCCATTGAGAAGCCCATGGATATTAAGCACCCCTTCAATAACGCAGAAGACGATTACGGGGAGGATGATGACGACGATGACGATGAGCCAGACTATTTGAAGCCAGACGGCGACTGTTCGCCGACATCGACAGGTCGACCCGCGGGGCCGCCCCCCACCTACCCCCCTCCCCCAGTGCCGGCAGCATCCCAGCTCCGTCAAGACTCCAGTCCAGGTTTCCACAAAGGCCCGCCTCCTGCCGTCCCACCTCTACACAGAATCCCGACCAGCCCGCTCCCCAAAAAACCCCCGCCCTGTGTCCCCCCTCCCTCCATACTGAAGGACCCCAACAAAGGACCACCCcctcccctgccctttgccccCCACCTGCACAGGTCCATTTCCCCCACCccgccgcctcctcctccccccaacGCAAAGAAAACTCTTCAAGGCCGGGTGGCATCAGCGGGGGGGCCTGGGAACGATAAGAGAGACTGGAGGCCTGTGCCGGCCTTATCGGTCCAGACCCCCGCAACTCTGCCCATCTGTGACCAATTAGAGAGCAGGATGGTCCTAAATGGTCCCGCCCACCGCTCCCTTAATGCTTTGGGGAGCCAATCAATGGGCAGCAACCACCACTGGGAGACGAGCAACCACCGCAGCAAGCCGAGCCTACCTCCTCAGTTAAACGTTGGAGGGGCTAACCTCAGACCTGTGATGTCAGACGCCCCGTCACACAATAAGCCGCCCCCCGGTCACCCGCCACTGCCTGGTCACCCTCCACTCTCTCCTCTACTTAAAGCTGGACTACTAAATAAGCCGCCGGTACCTAAACCTCCTCTGCCAACATTGAAACCCCCGCTGCCTGCAGCCAAGTCCAAGCAGTCGGGCACACCACTTCAAAGAGCATCTCCAGACGGCCAGAGCTTCCGTTCGCTGGGAGACGAGACGCCCACAGAGTTCAGGAGGAAACGAGACTCGTCCAAACACAGCGGAGGAGACGACTCCGACGAGGACTACGAGAACATGCAGCTGCCAGACTCCGTGTTCATTGATACGACTGAATCCAGCTTCGTGGAAAAGTTGTTCAGAGAGAGCCCCGTCCCTCCACAGGATGGACTGTACGCCATCAGGAACTCAGGAACCAAAACatcaaagGTGCTGGTGGTGTGGGATATCAGTATAGCCAAAGCCAGAAACTACCGACTGTTTGAAGAGgcGGACTGTGTGTTTCTGGACAACGAATTCACCTTCCCCACCCTGGCAGCTGTGATCGAACACTACTACAGCCATCCGCTTCCTCACCACGGCTCGCTCTGCCTGCAGAAGCCCTACACAAAGGGCTTCTGATCAACACAGTCGATCGGAAGCAGAACGCAGCGTCAGGATGCGTCTCCGTCAACGACACGTGGAAATAATCTCGCTCGCGCAGACGAAATAGCGGATCGTACCGCTCACTGTTCAGTGGGAAAGATCTGCGGTTGCACCAGAATGCACAGCAAAGCTTCAGGTTAAACAGCAAGGACAGTAACTTTCTGACTGCTCGGACACCatggtgttgtgtgtgcaaCTTATGTCAACTGTAATAACAAgacgaagaagaaaaaaaccatTAGCAATTAACAGTTAATggaacattatttaaagtgctcatattatgcttttgggctttttaccctttactttattgtgttatatatattttttgtgcacgttataggtttacaaagtgaa

Function

symbol description
sh3bp2 Predicted to enable SH3 domain binding activity. Predicted to act upstream of or within signal transduction. Human ortholog(s) of this gene implicated in cherubism. Orthologous to human SH3BP2 (SH3 domain binding protein 2).

NR:

description
PREDICTED: SH3 domain-binding protein 2

GO: NA

KEGG:

id description
K07984 SH3BP2; SH3-domain binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778808.1 True 2565 mRNA 0.53 13 7479129 7505666
XM_039778809.1 False 2382 mRNA 0.54 13 7479129 7493875
XM_039778810.1 False 2253 mRNA 0.54 13 7479129 7522091

Neighbor

gene id symbol gene type direction distance location
vldlr vldlr coding downstream 13068 7397054 ~ 7466061 (-)
kcnv2a kcnv2,LOC102778926 coding downstream 85164 7380444 ~ 7393965 (-)
LOC120545581 NA coding downstream 117184 7324542 ~ 7361945 (-)
LOC120544992 NA coding downstream 181208 7295509 ~ 7297921 (-)
LOC120545786 rab27b,LOC104935727,LOC103374166,LOC104963949,LOC108228659 coding downstream 204162 7188195 ~ 7274967 (-)
scpp8 NA coding upstream 113329 7635420 ~ 7640489 (-)
parm1 NA coding upstream 142167 7664258 ~ 7680152 (-)
htr1ab LOC103375131,LOC101466473,LOC102210591,LOC100704763,LOC104923798 coding upstream 258197 7780288 ~ 7782476 (-)
c7b NA coding upstream 325633 7847724 ~ 7866608 (-)
gadd45gb.1 LOC102786399,LOC101463858,LOC102303517 coding upstream 424771 7946862 ~ 7948604 (-)
G173554 NA non-coding downstream 2124 7476541 ~ 7477005 (-)
G173550 NA non-coding downstream 100755 7377127 ~ 7378374 (-)
G173526 NA non-coding downstream 184703 7294030 ~ 7294426 (-)
G173467 NA non-coding downstream 316912 7161724 ~ 7162217 (-)
G173418 NA non-coding downstream 979982 6498867 ~ 6499147 (-)
G173564 NA non-coding upstream 14274 7536365 ~ 7536616 (-)
G173573 NA non-coding upstream 106450 7628541 ~ 7628753 (-)
G173638 NA non-coding upstream 302596 7824687 ~ 7825279 (-)
G173661 NA non-coding upstream 387280 7909371 ~ 7912301 (-)
G173673 LOC107375064,LOC107094677 non-coding upstream 419497 7941588 ~ 7944249 (-)
G173470 LOC103389048,LOC105418623 other downstream 319042 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 658263 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 1104640 6368307 ~ 6374489 (-)
LOC120545230 NA other downstream 2078451 5396633 ~ 5400678 (-)
odf2a LOC103374699 other downstream 2581772 4846279 ~ 4897357 (-)
G173727 LOC107687935 other upstream 835632 8357723 ~ 8358027 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other upstream 1103391 8625482 ~ 8634067 (-)
G173900 NA other upstream 1548071 9070162 ~ 9071208 (-)
G174120 NA other upstream 2320721 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 2338910 9861001 ~ 9903007 (-)

Expression


Co-expression Network