LOC120544950 (LOC103473489,LOC103142714,LOC106917991,LOC106959058,LOC108231074)


Basic Information

Item Value
gene id LOC120544950
gene name LOC103473489,LOC103142714,LOC106917991,LOC106959058,LOC108231074
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 23015127 ~ 23036096 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778852.1
TAACTGGGAGCTAGAGCACATCACACACACTGCCAGGTTCAGGGGAGTTTGGAGAAAAACTTAAAAGctattgagatgtgtagaaACTCTTCTTGAGAGGTGAacacagaaaaataataaaaaagggaCAGAAGACAAAGAATGCTTCTGCAGCTGCTCAGTTTTGCTGCTCTTCTTGCTTGCGcCCATTGCCAGTGTCAGCAAGGCTGGAGGGAGTATGAGAATAAATGTTACTTCTTTTCAACTGATACAAAGTCATGGATGGAGGCCAACGCATTTTGTTTGGGGCTTAACACCAACCTGATGAGCATTCTGGACATTCATGAAAGGtTGTGGGTAAGGACACAAATTGGCACGGAGAGCTACTGGATCGGCCTAAATGACCAAATCTCAGAAGGTGTCTGGGAGTGGAGTGATGGGAGTCTTTTTATACCATACATATCATACTGGATGCAAGGCCAGCCTGATAACTGGGGCGATGAACCCGGGGAGGACTGTGGTCAGGTAGTAGGATCTAGCTTTGGACAGTGGAATGACGAGAACTGTGGCGTTAAGAGGAAATACATCTGCAAGTACATGAACCCGAATCCTAGCCCACAGTGTGACTTAGCCAACGGCTGGACACAGCACGGCTCCAGCTGCTACAAATTGAAGGCGGACACCAGAAAGAGTTGGGCAGCAGCGAGACATGACTGCGTGCAGGACGGAGGAGACCTGGTGTCCATTGCCACAGCAGAAGAGGAGCAGTATGTCACAGGATCACTGGATCCATCATGGATTGACCTCTGGATTGGGCTTTCCACACTGAAATGCAACAAGATTTCATGTCAAGTTGAAGCAGGAAACAGTCAGTACACCTGGTCTGATGCTCTCCCAGTGGGGTACACAAACTGGGCGAACGGTGAACCTTCAGgTGATACACAGGCCGGCTCATGTTCTGCGATCATCAAGGATTCATCAACTACATTTGGGAAATGGAGATCCCATGTGTGCAGATATGAACGTCCTTACATGTGTAAACGACCACTGAACACCATCTGCCCTTCTGGCTGGCTGAGCTTCGCTGGCAGTTGTTACTGGATGGTCAGTAATATCAATCTGTTGACCACCTGGCATGAGGCCAGCACCAAGTGCTCCGATATGGGGGCCCACCTGCTGATTATAAACAGTCAAGAAGAACAGTTCTTCATAAATGGAAACCTTCCAGACTTTCACCAAGTTGACATTCCTGACATCTGGATCGGTTTATCAGATAAGGACCAGGACGGGGATTTCAAATGGGTGGATAAAGGAGCGATTACTTTTTCAAACTATGGTCCTGGTTGGCCTAGAAACACTGCTGGCACCTGGGACTGTGGACAAATCTTCACAGGAAATTATGAGGGCAAATGGGAAACAACTAGCTGCTTCAAGAGCATGGGTTACATTTGTGAGATGACAGGTGGACAGAACATCAAACCAACTTCAGCTCCTGATTCCCACTGTGACCCTGGATATTTGTTGTATGGGGACTTCTGCTATCACTTTGAGAGTGAGTCAGTGAAAAACTGGCAGGATGCTGATACTCACTGTAGCAGAGATCAGGGTCATCTGGCCAGCTTCCACTCACAGGAAGAACTGAGTTTCCTAACTGCTCACATGCCAGGGGAAGCCTGGGTTGGTTTGAATGATATCAATGTTGAAAATCAGTGGGTATACACCGATGGAACTCCTGCGGACCTCCTCCCATGGGCGACCAACCAGCCAGACAACTGGGAGGACAACGAGGACTGTGCGCACCTCAGAGGGATGGATCACCATGAACCTGGAAAACTCAATGATGATTTCTGCACCTCCACTAAGAAATTTATCTGCAAAAAAGCCAAGGGACAAGGACCTCCTCCCCGGCCCCCAACATCTGGACCAGGATGGAATGAGAAATGTGGTTCTTGGATGGCTGACCCTTTTAACGACCACTGCTACCAGTTTAACTACCTGTCCATGAGGACGTGGGCAGAAGCTCGGGCCGACTGTGTCAACCAGGGAGGAGACCTCGTCAGTATCACCGATCCCTTCGAACAGGCCTTCATACAAGGCTTGATCCAGCTGAGTCCCACAGGGATCTCTCTGTGGATGGGCGGTCATGATTCTGTCACCGAAGGCGGCTGGGAGTGGTCAGATGGTTCTCCTTTCAGATACATCCGCTGGAATACAGGTAACCCAGACGACTATTACGGTGAAGACTGCCTGTCTATTTATATTAACAACGGCTACTGGAACGACGACAACTGTGAGAACAAAAGAGGATACATCTGCAAGCGGAAAGGAAAGACACCTGAGCCTCCTCCACCTCATGATGGTTTCATGACGGCGCTGGTGTGCCAGGACTCCTCTGCTGTCCTTCACTGTCCACATGGAAGTGTAATTAACGTCCAGTCGGCTTTCTACGGACGAAAGAGTGATGACATCTGTCCACACCTGGATGGTTCAGGGGGAGGAAGCTGCACAGTGGAAGGTGTCCTTCCTTACATTAGAAAGCAATGTGACAACCATCCTCACTGCTTTGCATTCGCCCATGTGGAGGTGGACCCCTGTCCCACAGTTTCCAAATACCTTGAGATCGTCTACAGCTGTGAACAAAAAGTGTGTCTGCAAGGCCTGGGTGTCGAGGACGGGAACATCACAGACTCCCAGCTCTCTGCTTCGTCCTCCACTGGTCTCTTCACTCCCAACAAAGCTCGTTTGAATGGAAATTCCTGCTGGATGCCTTCAGGAAGCCCAACTTCAAGCTGGATCCAGGTAAATCTGGGCCAGACCAGAAAAGTAACAGGAATAGTAATCCAGGGTTGTCCTCAAAATGACCACTGGCTCACCAAATTTAAGATCCAGCACAGTACGGACGGAACAAGCTGGACTGACTACACTGCTGACGGCCAGTTTTTCCCAGGctcaacagacagaaacagtcCTGAAACTCAGCTACTGGGTACACCTGTGTCAGCCCAGTATGTCCGCATTCTCCCACTGGAGTTCAGCGGTCAGGCAGGCCTTCGCTTCGACGTCTTAGGGTGCACACCAGACTATGCAATCACATGCGCCAATGTGCCCAACTTCAACTTTGCCAATGATAAAATGACTGTTCATTGTCCAGCTAGCTGTGCCAATGCTAATTACAGAGTGTACGGCACTACAGTATATCGTGGGGACTCAAACATATGTGCTGCAGCTATCCATGCTGGAGTGATATTAAATGACATCGGAGGAGACTGTACTTTGTTGAAAGCTGCAGGACAGAACTTCTATGCGGGCTCCACCAGGAATGGCATCACCTCAAGACAATTTGATGGAAACTATGCTGTGTCGTACACTTTTGCAGATGGGGAGCTGAGGTGTTCAGGGCCTGACTGGTACGAGTTTGGAGACTTCTGCTACAAACCTTttcaagacaaaaaaacatggcATGGTGCCCAGCACACCTGCAGGACTATCGGTGCTCAACTCGTGTCCATCCTCTCAATGAAGGAGCAGAGCTGGCTGGAAAGCTACTTGTACATGGccaccAGTGACGTGTGGACTGGTCTGAATGACCTGGTTGTGACTGGTATGTACACCTGGTCTGATGATCACATGGTTACCTTCACTTACTGGGCTCCAGGGGAACCCAACAACCACGATGGGTTCAGTGAAGACTGTGTTGAGATGTTACACCAGACTGGACGATGGAACGACGTGTCCTGTACAGAACTCAATACCTACATATGTAAAATGCCCAAAGCACATTACCCATTGCCCTCTGTAAAACCCACTGTGTATGGGTGTGCTCAGGGCTGGGATGCATACGGCTACTCCTGCTACTGGATGGAGGAGACCACCAGGAGCTGGTCAGAGGCTAAGGATTTCTGTAAAGAGCAGGACGGCTTCTTACTGCACATCGGAGACATTTATGAGCAGGCCCATTTTACAGTGGCACTGTCAGGAAAGACGGGTATGTGGTGGATCGGCCTGCGTGCTAAAGGAGAGGCAGGTGGAGGGGTCGACTACATCTGGGACAACGGCTCACCTCTCACCTTCACTCACTGGGACAGAGATCAGCCAGATAACGGGGATGGGACTTGTGTGACTATGACAACGGGTCAGATTGGTGGTTTCTGGGATGACCAGCAGTGCTCAGAGAAACACGCCTTTGTCTGTGAGAAACCCAGGCCTGACATCACCCCACCCACTAAGCCCCCGACTCCTCCTCCTGCACAGGGCTGTGCTGATAGCTGGACGGCTCTGCCTCACTTCAGAAACTGTTATAAGCTCTTCCACAATTTGGGCTGGTCCAAGAAGAAGAGCTGGGGGGCAGCACATGAGGACTGTGTCGCCAGAGGAGCTAACCTGGTCAGCATCCAcagtcaggaggaggaagagttcCTGTCTCTGTACAGCAAAGGCAGCAGCAAGTGGATAGGCCTCAAGCACAACCCAACAGAAGGAGGTTATTCTTGGAGCGACGGcacacctctctctcacaccaACTGGGGCAGCGGGGAGCCCAACAACCATGAGGGCCGCGAGGAGTGTGTAGAGATGGTGAGCAGCAGCAACGGGACCTACTCCTGGTGGAACGATCTCAACTGTGACGCTCACCAGGACTGGATATGCATGATTACTAAAGGAAAGAACCCCATCCTGCCCCCAGTGCCCCCACCTCCACTCCCAGCTCCTGATTGTGGTACTAACCTTGGCTGGAGGAAgaacaaaaacatctgctactaCTACAACGACACCGACATTGTGGATTTCCACACGGCTATGAGACGCTGTCACCAGGAGAAGGCCTTACTCGTCTCCATCCTAAACAAAGACGAACAGGCATATGTTAACAGCATGGTGGGGACAGGCCAGGTGGCTGCAGCTTGGATTGGAATGAGGATGTTTGGCATTGCTGGTGGAGAATACATGTGGGTGGACTTCTCCCCTGTGACGTACACTCACTGGGGTCCAGGTGAGCCCAACAACGCCAACGGGGAGGAACAGTGTGTTCAGATGAACAGACATCAAGGTGGATGGAACGATGCCAACTGTGGTCGGGCTGGAGCAGGTTATGTCTGTAAGAAGTTCCCCGGAGATATTCACACCCCTCCTCCACCCACACAGCCCTGGGAGGGCAACTGCCCGGCAGGTTGGATGCGTTTCAAGGATAAATGCTTCATGTTCAAAGGGAAGAAAAATGACATTAAAGCCAACTGGTCTTATGCTCGGAACTGGTGCAAAGACCAAGGAGGAGAGCTGGCAGTTATTGATGACCAGTACGAGAATGaCTTTGTTTCTAGTTACCTGAGGGACCTGAGGGGTCCCACGTGGATCGGGCTGTCAGATCTCTTGTTAGAGAATCAGTACGCCTGGAGTGACGGCGTCAGCCCTGTGCTGTACACCAACTGGAACGACAAGGAGCCTAACAATGCAGGAGGAACGGAACACTGTGTGGCgatggctcacagtcacctggaTAGCGGCAAGTGGAACGATGACGCATGTCATAAGGATCATAGCTTTGTCTGCTACAGGAAGAAATCGAGCAGCATCAATCCTCCACCCCCAACCAAGAGCCCCTGCCCAGCTGGCTACATCTCCTGGTACCAGAACTGCTACAAGCTGGTGGAGGAGCCGGCGACCTGGGACAAGGCTCAGACGTCCTGCGAGCAGCAGGGAGGCGACCTGGCCAGCATCGATATGAGCTACGACCAGGCCTTCGTCGCTGGAGTGGTCCTGCAGGGCAGAGCCGACGCCTGGATCGGACTCAGACGCAAGGATGATGGCTCCTACACGTGGACAGATGGCTGGCCAGTTTTTTTCACTCAGTGGGGACCAGGAGAACCCAGCAACATTAAGGATGAGGGCTGCGTGAGTATGCACGCTTCACGCGCGTTCCACGGGACCTGGAATGATACTAAGTGTGACCAAGCTAAACCCTACATCTGCAAGATCTCCTCAGAGAAACCGCCGCCGACTCCTGCCCCTGGTGACGGGAAGTGTCTGCCATTCTGGATACCCTACGGCCGCTACTGTTACTACGTGCACAACGGTAAACAGGGTTTCTCTTGGCCAGACTCCCTTCACTACTGCCAGTCGGCCAAGGCAAATCTGGTGTCCATCCACAGCAGAGCGGAGGTGGAGTTCCTCAGAAACCTCAACTACACCAAATATCACAACATCTGGATCGGCCTCACCAGGGACCGCAACTTTGGCTGGGGCTGGACAGATCAGACGTCTCTGGGCTTCGTCAACTGGGCTCCAGGTGAGCCCAATGCAGCCTTTCACCCTGGGGAGGTAGGCGAGGAGAACTGCGTGGAGATGTACGAGGACGGACGCTGGAATGACAACAACTGCCTGCAGAAGAGAGGCTTTGCATGCCGCCACCGCCAGTATTATACAACAGATGATGGCGGTAATCCAATTTTCCCCACCGATGATCCAAACGTCAATAATGGAGGGGTGATAGCCGGCGCCATCATTGCAGCCATTGTGGTTTGCAGCTTGATAGCTGGATTGCTGTACTATGTTTTCAGTGTCCGAGGCTATAAACTGAGCGATTTGAGCCTGCCAACGAAAACAACCACTCCTGTTGATGTGCCTGCTTTCACCAACCCCAACTTTTCAGGAGAATCAGACACATAGACCATCATTTAAGTTTTGTACAGTacattgaattttttttcaaatcagtgATAGTGTAATTTTTAAGTTTCCAGAGTGCTATAAGATTGAACTCTATTGTATATATTGTAATAcactaataaaaataatttgtaaACTTTGTTTTAAAGTGTCGCACTTACATTTTTGGGGTGCAACAGTTGTAATGTTTACAGCAATCTGTGCCACATGGCCAAAGTAATTCAGAAATGTTGTTTATGAAACtcactgttaatgtgttatttACTGACCTTTACCACCAAATTGTGTAATTCTTGTTTCCTTAATAAAATGTGTAAACAACAATAAATTAAGAGTTAacaacaataaata

Function

NR:

description
PREDICTED: macrophage mannose receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778852.1 True 6993 mRNA 0.50 50 23015127 23036096

Neighbor

gene id symbol gene type direction distance location
sdad1 sdad1 coding upstream 18286 22990154 ~ 22996841 (+)
LOC120545187 NA coding upstream 25811 22985204 ~ 22989316 (+)
ptpn13 ptpn13 coding upstream 30207 22936704 ~ 22984920 (+)
arhgap24 arhgap24,LOC102789489 coding upstream 122604 22824300 ~ 22892523 (+)
esm1 esm1,LOC102788147 coding upstream 200981 22812118 ~ 22814146 (+)
LOC120545462 ppef2,LOC103366113 coding downstream 38474 23074570 ~ 23088410 (+)
amacr amacr coding downstream 119742 23155838 ~ 23165201 (+)
slc45a2 slc45a2 coding downstream 133391 23169487 ~ 23202930 (+)
nxnl2 nxnl2 coding downstream 187591 23223687 ~ 23226613 (+)
csgalnact1a LOC102302787 coding downstream 193741 23229837 ~ 23259542 (+)
G176974 NA non-coding upstream 81482 22893156 ~ 22933645 (+)
G176908 NA non-coding upstream 267801 22747108 ~ 22747326 (+)
G176906 LOC107085810,LOC102226223,LOC103473886,LOC106958946,LOC106918003,LOC105921164 non-coding upstream 300630 22713906 ~ 22714497 (+)
G176905 hcn1,LOC108278484,LOC106958946 non-coding upstream 309003 22705726 ~ 22706124 (+)
G176904 hcn1,LOC104948050,LOC106560798,LOC107749006,LOC107662227,LOC103390262 non-coding upstream 353309 22661584 ~ 22661818 (+)
G177039 scarb2,LOC104955650,LOC107395254 non-coding downstream 68546 23104642 ~ 23116716 (+)
G177043 NA non-coding downstream 98553 23134649 ~ 23134887 (+)
G177079 NA non-coding downstream 105633 23141729 ~ 23141935 (+)
G177089 NA non-coding downstream 130463 23166559 ~ 23171678 (+)
G177091 NA non-coding downstream 136156 23172252 ~ 23177502 (+)
klhl8 klhl8 other upstream 6293 22998253 ~ 23008834 (+)
G176870 cplx4 other upstream 477790 22531908 ~ 22537337 (+)
LOC120545252 NA other upstream 490722 22496413 ~ 22524405 (+)
G176753 NA other upstream 732964 22278880 ~ 22282163 (+)
G176526 NA other upstream 2068072 20946684 ~ 20947055 (+)
G177094 NA other downstream 146577 23182673 ~ 23184262 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 404887 23440983 ~ 23458605 (+)
rpl37 rpl37 other downstream 687382 23723478 ~ 23727242 (+)
LOC120546142 NA other downstream 688070 23724166 ~ 23724245 (+)
LOC120546141 NA other downstream 689878 23725974 ~ 23726052 (+)

Expression


Co-expression Network