LOC120544996 (LOC104958126)


Basic Information

Item Value
gene id LOC120544996
gene name LOC104958126
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 9942713 ~ 9948797 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778917.1
GCATATACATCATTGCCTCCTTATGAAGAACTGCTGGGCTTTCTCTCGTCCGTGTGCTAATTGGCCTCAATATGTGGACgtctacactgtactAAGGGCCTGGTGAGGCATTCGCTGGTTTCTCGACAGCCATGGAGAAACTGAAGGTTCTGTTTGCTGTTGTCTTGTCTCTGGGAACGGCCGCAGCAGCCTCTCTGGGCGTTGTGCAAACAGAAGGTGGCGGTGTTCAGGGCCAGAATATCCGCCTCGGTCTTTTCCGCTCCGTAGATGTTTTCAAAGGAATTCCCTTCGCTGCCAAGCCTGGAACATTTGAGAAACCCAAACCTCACCCTGGCTGGGATGAAATCTCACTTCTTTCATCCGCAGGTATACTGAAGGCAACAAAGTTTGCTCAGAGATGTCTTCAGATCAGCATGCTCCAGACTTCAAGttttggtagtgcagactgccTCTACCTCAACATATGGGTTCCTCACGGCCAAAATGTGTCATCAAATCTCCCCGTCATGATATGGTTGTACGGAGGAGGCTTCATTGTCGGTGGTTCTATGGGGCCAAATTTTCTCAACAATTATCTGTACAGCGGTCGGGAAATTGCAGACAAGGGCAATGTAATTGTGGTGTCTGTGGGATACCGTGTGGGCACCCTGGGCTTCCTCAGTACAGGGGACTCTCGCTTACCTGGAAACTACGGCCTTTGGGACCAGCATGCCGCCATCGCCTGGGTGAACAGGAACATCCGCTTGTTTGGAGGAGACCCTGACAACATCACCATCTTTGGAGAGTCTGCAGGTGCAGCTAGTGTCAGCTTCCAGACTCTCTCCCCCCACAACAAAGGACTGTTCAAGAGAGCCATCTCCCAGAGTGGGGTTGCCTTCTGCCCCTGGGCACTGAACAGGAACCCACGCAAGGTGGCAGAGGAGGTTGCAGAGACCGTCGGCTGCCCCACTGATGACAGGATGGAGGCGTGTCTGAAATCAACTGATGCTGTGGCTCTCGTCATGGCTGCTCCCATTATTGTACCAGGCTCCCCAGACTATCCCGGTGTGAAcaacctgtctctgtctcctgttGTTGATGGAGACTTCCTCCCTGATCAGCCTGGCAACTTGTTTCACAACGCCGCTGAAACTGATTACCTTgcaggggttaataacatggaTGGACATCTGTTCACCTCGAAGGACATTCCTTCCCTTGGTGACAAGAATCAAGACACTATAGTAGAAGACGTAAAGAGGCTCCTTGCTGCTTATACCAAAGAGACGGGGCAAGCTGGTTTGGAGATTGCCTTTGCTGAATACTCGTCCAACTGGGGATCAACACCCACCCAGACCACCATTAAGACAGCTGCTGTGGATATTGGGACTGACTACCTCTTCCTGGTTCCTATACAGACTGCCATCTTCCAGCATGCAGCTAATGCCAAGTCTGGCCGTACCTACTCCTACCTGCTGTCTGAGCCCAGTTTATTGGCTGGACCAGGCAAACCCTACCATGACTGGGTGGGAGCCGATCACGCTGATGACCTGCAGTACGTGTTTGGCAAACCCTTTACCACACCAAAGGCTTAtggggacagacagagagacctGTCTGGCTATATTATTGCCTACTGGACTAACTTTGCCAGAACTGGaaacCCAAACAAAGGAAACCTACAGGTGCCTGTGACTTGGCCTGAATTCACCAGCACTGGACAGCAGTTCCTGGACATCAATGCTAAGATGAATGAGAGCTCCATTGGACAGGAAATGAGGCAGCGTTTTGTCCACCTTTGGACCAGCACCCTTCCCAGTCTCCCATCACATGCTCAATGatgcatttttttcatttaaaatacaccaaatatacaaataaaagagTGTGTACAATAAACCTTATGAGTTCAAAATA

Function

NR:

description
PREDICTED: bile salt-activated lipase-like

GO: NA

KEGG:

id description
K12298 CEL; bile salt-stimulated lipase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778917.1 True 1896 mRNA 0.50 12 9942713 9948797

Neighbor

gene id symbol gene type direction distance location
zgc:92275 LOC107665231,LOC107754619,LOC106565467 coding downstream 3763 9923206 ~ 9938950 (-)
LOC120545811 LOC103364603 coding downstream 84869 9835813 ~ 9857844 (-)
phpt1 phpt1,LOC104936327,LOC101477977,LOC106536853,LOC100711007 coding downstream 107936 9831300 ~ 9834777 (-)
mamdc4 NA coding downstream 111485 9799084 ~ 9831228 (-)
LOC120544929 LOC102775582,LOC102289500,LOC103364605,LOC106529419,LOC102193727,LOC108241375 coding downstream 150373 9782197 ~ 9792340 (-)
LOC120544997 LOC103362077 coding upstream 1363 9950160 ~ 9954737 (-)
LOC120545003 LOC103362077 coding upstream 9910 9958707 ~ 9963616 (-)
LOC120544999 LOC103362077 coding upstream 17291 9966088 ~ 9971850 (-)
gtf3c5 NA coding upstream 23897 9972694 ~ 9984025 (-)
gfi1b gfi1b coding upstream 44801 9993598 ~ 9999567 (-)
G174116 NA non-coding downstream 145742 9795843 ~ 9796971 (-)
LOC120545476 NA non-coding downstream 604295 9337767 ~ 9338418 (-)
G173944 NA non-coding downstream 644235 9297725 ~ 9298478 (-)
G173943 NA non-coding downstream 645099 9296393 ~ 9297614 (-)
G173942 NA non-coding downstream 657380 9285076 ~ 9285333 (-)
G174139 NA non-coding upstream 95835 10044632 ~ 10045354 (-)
G174143 NA non-coding upstream 139485 10088282 ~ 10088523 (-)
G174166 NA non-coding upstream 246279 10195076 ~ 10284037 (-)
G174168 NA non-coding upstream 287948 10236745 ~ 10239274 (-)
G174196 NA non-coding upstream 382530 10331327 ~ 10335010 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other downstream 39706 9861001 ~ 9903007 (-)
G174120 NA other downstream 99214 9842812 ~ 9843499 (-)
G173900 NA other downstream 871505 9070162 ~ 9071208 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 1308646 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 1584686 8357723 ~ 8358027 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 148454 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 430159 10378956 ~ 10395744 (-)
LOC120545042 NA other upstream 1204970 11153767 ~ 11164494 (-)
G174439 NA other upstream 2408131 12356928 ~ 12357890 (-)
G174442 lpar1 other upstream 2441758 12390555 ~ 12391484 (-)

Expression


Co-expression Network