pmchl


Basic Information

Item Value
gene id pmchl
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 8664825 ~ 8665456 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778936.1
AGCAGAAGAGCTCCGGAAAGAAACTCCTTCACGAACCCAAGGCTGCTGCACCTCCTGGAAGCTCTTCACCATGAGACAGTCGCTCATGTCCGTCGTCTTCGCCGCAGCACTCTTGATCGAGTGCTATGCACTGTCAGTGGCGTCGCCAGTGGGCAAGACTGATGACGGCTCCTTGGAGCAGGACACTTTCGCCTCGCTGCTGAGCGACGATGCGACAGAAAACGGCCTCGGCGACGCAGATCCGGCCGCTGCGGGCAAAACCAGGAGACAGAGGGTAATCGTCATCGCCGATCCGAGCCTGTGGAGGGACCTGCGGGTGCTGCACAGCGGAGTGTCCCTCTACAAGCGGAGAGCTGACGACAACAGCCAGGTCATCGAGCAGAGAGACGCCGGCCAGGACCTGAACATCCCCATCCTGAGGAGGGACACAATGAGGTGCATGGTGGGACGGGTGTACCGGCCATGCTGGGAAGTCTAGGACATTTTGCTCTGCTTGTCCAGATGCCCGAGCAGCGGACGACCACCATATTTTTGGGCGGCCTCAGGCTGAGATGCAACAAAATCCAAATATCTATGtattatatttaaattattgCAGATCTGAGAATTAAAAACCCCGAATTCTGCCTTAA

Function

NR:

description
pro-MCH 2

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0030354 melanin-concentrating hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778936.1 True 632 mRNA 0.56 1 8664825 8665456

Neighbor

gene id symbol gene type direction distance location
tmc2a LOC105921883,LOC107083736 coding downstream 47861 8590269 ~ 8616964 (-)
LOC120546028 NA coding downstream 78016 8576503 ~ 8586809 (-)
slc30a5 slc30a5 coding downstream 89285 8558770 ~ 8575540 (-)
LOC120545024 LOC103353409 coding downstream 134796 8491106 ~ 8530029 (-)
LOC120545589 NA coding downstream 276215 8383515 ~ 8388610 (-)
LOC120545257 npr2,LOC102310518 coding upstream 34503 8699959 ~ 8784342 (-)
alad alad,LOC102791750 coding upstream 130374 8795830 ~ 8812094 (-)
ssna1 ssna1,LOC102792612 coding upstream 187331 8852787 ~ 8856729 (-)
stxbp1a stxbp1,LOC101480228,LOC106536584 coding upstream 956969 9622425 ~ 9706925 (-)
slc31a2 slc31a2 coding upstream 1056238 9721694 ~ 9732993 (-)
G173840 NA non-coding downstream 28571 8635736 ~ 8636254 (-)
G173778 LOC103353408 non-coding downstream 116813 8538120 ~ 8548012 (-)
G173768 LOC103353410 non-coding downstream 180576 8483879 ~ 8484249 (-)
G173765 NA non-coding downstream 185578 8478356 ~ 8479247 (-)
G173761 tjp2,LOC103353410 non-coding downstream 196445 8455764 ~ 8468380 (-)
G173848 NA non-coding upstream 26929 8692385 ~ 8692745 (-)
G173865 NA non-coding upstream 211225 8876681 ~ 8877345 (-)
G173874 NA non-coding upstream 233897 8899353 ~ 8903114 (-)
G173895 NA non-coding upstream 269691 8935147 ~ 8935592 (-)
G173906 NA non-coding upstream 438496 9103952 ~ 9104183 (-)
LOC120545754 zfand5,LOC102789640,LOC104922891,LOC103362637,LOC102194010,LOC102308986 other downstream 30758 8625482 ~ 8634067 (-)
G173727 LOC107687935 other downstream 306798 8357723 ~ 8358027 (-)
G173470 LOC103389048,LOC105418623 other downstream 1504738 7152870 ~ 7160087 (-)
LOC120546140 NA other downstream 1843959 6820812 ~ 6820866 (-)
LOC120544971 NA other downstream 2290336 6368307 ~ 6374489 (-)
G173900 NA other upstream 404706 9070162 ~ 9071208 (-)
G174120 NA other upstream 1177356 9842812 ~ 9843499 (-)
grin1a grin1a,LOC107600932,LOC103389281,LOC105024190,LOC106513393,LOC100534577,LOC101475684,LOC104936329,LOC102201489,LOC102777117,LOC102302700 other upstream 1195545 9861001 ~ 9903007 (-)
gtf3c4 gtf3c4,LOC102793669 other upstream 1431795 10097251 ~ 10108289 (-)
adra1ab LOC104947653,LOC100705829 other upstream 1713500 10378956 ~ 10395744 (-)

Expression


Co-expression Network