reep5 (reep5,LOC105917055,LOC107098485,LOC103152299)


Basic Information

Item Value
gene id reep5
gene name reep5,LOC105917055,LOC107098485,LOC103152299
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 1506554 ~ 1522474 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779188.1
ATCCGGTCTGAGCCTAGCGGTATATTGGGTTGCAGGTAGCAGCCTTGTCGCAGTTTGACTCTCAACTCATTTCGTAAGCAGCCTCGCTAAAGAAGGAAGTGCAGCCATGGCGCAGGGGCTCAAAGACAGATTTAATAAGTTCCTCCATGAAAAGAATCTCATGACAGATGGGCTGGCAAAAGTCGAGGCGAGAACCGGAGTAAGCAGGACGTACATCGCCCTGGCTGTCGTCGTCATCATCGCAGTGTACCTGGTCATCGGTTACGGAGCCTCCCTGCTGTGTAACCTCATCGGCTTCCTTTACCCAGCATACATATCGATTAAGGCCATTGAGAGCGCCACCAAAGACGATGATACCAAATGGCTGACCTACTGGGTGGTGTACGGACTCTTCAGTGTGGCAGAGTTTTTCGCTGATATCTTCCTCTCCTGGTTCCCATTCTACTACATGGGAAAGGGGGCCTTCTTGGTGTGGTGCATGGCTCCGACCTCCGCCAACGGATCAGTCCTCATTTATAACCGGATCGTTCGACCATTTTTCCTCAAGAACGAAGCCAAGATTGACGACGCGGTGAAGAACCTGAAGGACAAGGCGTCAGAAGCTGCTGACAAGTTCAAAGATGAGGCCAAGAGAGCCACAGCAAACATCATCTTTGAGGAGAAGAAGAGCTCCTAAGGCGGAGGCTTCCTGTCTCCGGAGCCAActctggtgcagagagaaatGTTGccttgaaaatgtttgttttttagagATCTTGTTCAGTATGCAATCTTAATCTTCATCCAACCTGTATTAGATGTTATACGTGTCATGTGGCGCAAATGAAGCCATTTCCCAGCTcaatttacttatttaactttGCCTTGTTGGATGGCTTTCAGATAACGGTCTGCTGGCCCTGACGCGCTTTAGGAACCAAATAAAAACCAACTCAAGTGGTTCTTTGATTCTTTCA

Function

symbol description
reep5 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including gonad; hatching gland; nervous system; polster; and trigeminal placode. Orthologous to human REEP5 (receptor accessory protein 5).

NR:

description
receptor expression-enhancing protein 5

GO: NA

KEGG:

id description
K17279 REEP5_6; receptor expression-enhancing protein 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779188.1 True 956 mRNA 0.48 5 1506554 1522474

Neighbor

gene id symbol gene type direction distance location
syk syk coding downstream 83395 1392764 ~ 1423159 (-)
LOC120544936 LOC107748254 coding downstream 322651 1174528 ~ 1183903 (-)
LOC120545116 LOC103364476 coding downstream 472625 1012144 ~ 1033929 (-)
lmnb1 lmnb1 coding downstream 518673 966999 ~ 987881 (-)
slc27a6 slc27a6 coding downstream 555348 883869 ~ 951206 (-)
nrg1 NA coding upstream 132874 1655348 ~ 1715953 (-)
slc38a9 slc38a9,LOC103372190,LOC103372967 coding upstream 224109 1746583 ~ 1794896 (-)
purg purg,LOC101478350 coding upstream 280524 1802998 ~ 1813828 (-)
il6st NA coding upstream 298290 1820764 ~ 1863988 (-)
LOC120546089 NA coding upstream 335572 1858046 ~ 1860861 (-)
G171987 NA non-coding downstream 10027 1494835 ~ 1496527 (-)
G171986 NA non-coding downstream 12237 1493231 ~ 1494317 (-)
G171959 NA non-coding downstream 48940 1378242 ~ 1457614 (-)
G171960 NA non-coding downstream 132796 1369246 ~ 1373758 (-)
G171949 NA non-coding downstream 134820 1333823 ~ 1371734 (-)
G172000 NA non-coding upstream 35070 1557544 ~ 1557775 (-)
G172053 NA non-coding upstream 218550 1741024 ~ 1741430 (-)
G172111 NA non-coding upstream 424170 1946644 ~ 1946905 (-)
G172150 NA non-coding upstream 560334 2082808 ~ 2083242 (-)
G172151 NA non-coding upstream 567239 2089713 ~ 2089979 (-)
G171868 NA other downstream 335765 1170203 ~ 1170789 (-)
megf10 megf10 other downstream 359967 1040798 ~ 1146587 (-)
prrc1 prrc1 other downstream 498366 994437 ~ 1008188 (-)
G172032 NA other upstream 74042 1596516 ~ 1602156 (-)
G172311 NA other upstream 1462348 2984822 ~ 2985260 (-)
G172620 NA other upstream 2364114 3886588 ~ 3943831 (-)
cdk9 cdk9 other upstream 2616692 4139166 ~ 4147813 (-)
dpm2 dpm2 other upstream 3030397 4552871 ~ 4559768 (-)

Expression


Co-expression Network