bbln (clg14h9orf16,LOC103376136,LOC106518230,LOC103028983)


Basic Information

Item Value
gene id bbln
gene name clg14h9orf16,LOC103376136,LOC106518230,LOC103028983
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 20167927 ~ 20170745 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779248.1
ACATTTCTCCCATAATGCATCACTTCGAGCTAGCCAACAACCTTTGGAGACTTCCTCCTGGAACCCATAGATATATGTATGTCAATGGATATACCTGGAACCAAACTGTCTGACAATAACGTTAAATTTGCCAACCGCCAATAAAAAtccgaagaagaagaagaagaagaagaagaagaagaagaagaagaaaataacgTTAATTAGACATTTAACGGTGAACTTGTTTATTCATTCAGTTTGCTGAATTTTAACTGTTGCTCGTTAGTTTGCTAATGCTAATTACCTGTCAACCCAGCCAGCTAGGTTAACAGCATACAGTTAGGACAGCTAACTATTGTAAAGTAATAAACGTGAATATTTAAAGTTAAATAATGTCTGGACCAAATGGAGATCCAGACATCCCAATTGACGATGCTATTATCAACGACGAAGATGAATTCGAGGACGAAGAGTATGAAGCCATCAACTCCATGCTAGATCAGATCAACTCCTATCTCGATGACCTGGAAGATCGGAATGATTCACTTAATGGCAAACTGCACGAGCTTCTGGAGTCAAACCGGCAAGCCCGGCTGGAGTTCAGGGCCCAACTGCTGGGTTCCCAGAGCCAGGAGGAGCATTGTCCTGCAGACGGGGACTCCTCCTCAACCAGCAAGGAATACTTGAACAAGGACATTGAAAATGAGTGATGACGAGTGGGGTGGGATGggatggggtggggggggttgaGTTCAGCAAAATACAGGGATGTAAATATTTATGAAAGTTGACTCaactccttatctgtctgttgAACTAATGACCCTTGATCTGCGTCGCCCATCAATTTTCTTCTTGTGAATTTACACCCCCATCAGCAGATGGGATATTTTGTTTCTCCTCTATCAGTGAACTCAATCTAGTTTTCCCTCTTTTGTGATGTGCTGATGTTTGTTTCCTGAGCAGATTGGAGTTTATTGATCTCTAGCAGCTTCTTAAACAAGTTTCACACCATAGTCACTTGGGACTATTGCAGTAAAATCTAAGTCGTTGATGTgttgacatttaaaaagcaatgtcccccctttttttttgttaaggtAAAAAAGCAGATACACATGACAATGTGATGTGATAACATGCTGATATCTATGGTGACCCATTCTGTCAAACACATTACTGCAGACTCTCCCATGATCTTCAGTATGTCCTCATTGCCCATAGGGGCATAGTCAAACTTCTGTGTAGTGTGTTGAAATTGAGATTTTTAATAGCTTTTGTGTCTGTTCCTGTTTGTTTTATCCCAAAAAGTAAATGTGCAACACTACAGATGTGTATTAATGTTTGATCTGCATCATGACTGTATAACTGTCAATCTGCTGTCCTGTTCATTAGCATTAATCTGTTTAGGATAAGTGAGCTTATAAGTGTTTGTGTATATTAAGAGTTagccaaaaaaagtaaaaatgaagtCAACAAAGTCTGGGAATTGTCAgacattttaatataaattaaaatgactgaaaacaaaaatccaaaaatacataaaacttCCAGCAGTTAGAAAACATCATCTGTTTGTTCACCTTCATTTAGTagctaaataaaaataaaaacata

Function

NR:

description
PREDICTED: UPF0184 protein C9orf16 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779248.1 True 1602 mRNA 0.39 2 20167927 20170745

Neighbor

gene id symbol gene type direction distance location
traf2b traf2 coding upstream 117704 20037864 ~ 20050223 (+)
bspry bspry,LOC100703027,LOC102783296 coding upstream 139497 20020957 ~ 20028430 (+)
LOC120545547 LOC103368295 coding upstream 197815 19963771 ~ 19970112 (+)
pax8 pax8,LOC102780591 coding upstream 224084 19929571 ~ 19943843 (+)
lman2la lman2l,LOC108231067 coding upstream 267667 19894116 ~ 19900260 (+)
dnm1a dnm1 coding downstream 11000 20181745 ~ 20236007 (+)
hspa5 hspa5 coding downstream 92030 20262775 ~ 20266809 (+)
rgs3a rgs3,LOC102788614,LOC104953710 coding downstream 106542 20277287 ~ 20425401 (+)
znf618 znf618,LOC101485385 coding downstream 287611 20458356 ~ 20497767 (+)
trim32 trim32 coding downstream 525307 20696052 ~ 20701783 (+)
G176357 fubp3,LOC106522831 non-coding upstream 77069 20089106 ~ 20090858 (+)
G176335 LOC103376127 non-coding upstream 80286 20079851 ~ 20087641 (+)
LOC120544937 NA non-coding upstream 98097 20068760 ~ 20069830 (+)
G176346 fbxw5 non-coding upstream 105943 20055289 ~ 20061984 (+)
G176289 NA non-coding upstream 261804 19883987 ~ 19906123 (+)
G176410 NA non-coding downstream 66782 20237527 ~ 20241216 (+)
LOC120545553 NA non-coding downstream 266426 20437171 ~ 20440566 (+)
LOC120545557 NA non-coding downstream 327077 20497822 ~ 20499818 (+)
G176477 NA non-coding downstream 329721 20500466 ~ 20502348 (+)
G176507 NA non-coding downstream 766061 20936806 ~ 20937292 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 253247 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 765548 19380250 ~ 19402379 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 1444142 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 1510308 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 1516858 18635026 ~ 18651069 (+)
pappaa pappa other downstream 344602 20515347 ~ 20620786 (+)
G176526 NA other downstream 775939 20946684 ~ 20947055 (+)
G176753 NA other downstream 2108135 22278880 ~ 22282163 (+)
LOC120545252 NA other downstream 2325668 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 2361163 22531908 ~ 22537337 (+)

Expression


Co-expression Network