bmpr1bb (bmpr1b,LOC102795848,LOC101481773,LOC102310602)


Basic Information

Item Value
gene id bmpr1bb
gene name bmpr1b,LOC102795848,LOC101481773,LOC102310602
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 18906742 ~ 18966325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779258.1
GGTGGGAGCTGTACGCAGGACGACGCGAGATTTAACCAGCCCCAAACGCGTGGTACACTTGGAAAAGTCTGCCGCAAGACAGAgggacacacatgcaaacaaaacagagcacgGTAGAGTTCAAAACAAGACAAATTGGGATCCTGTCGAGCTGCTGTTGAACCGAAAAGGAGACGagaAAGACGAGTGCTGGAGCGGTAGCTGGGTACAGTGACAGGATGCTTTCTGATGACCTATGTGTGGATGTTTCGGGAGAGGGCAGAGGGCATTTAGAGTCGTACATGTGAGGCCGTATGCAGGGAGATGTGCTGACATCCGAGCTTTGCATTTTCAACCGGAGGTTAAAGGCGGATGAGGAGGATGCTGCAGTGACGATTCAGAACAAGTCGTGTTTGCATAGATCACATCAGGCTGTCAGTGTGGAGTAGTGCTGGAGGCTGCGGGGCTGCTGTGTGCTGTGGGAAGTTCCTGAGAGTGCAGAAAGGCCGAGTGGCAGTCACTCACAGAGAGACACTTGTGCAGAAAGTGGACTGGTGCTATTTCACGGAAGGATATAAAACCCAGTCTTACACCTCTGCCTCTTTGCACCGGTGTGTTCGTTGTGGCTGCGCCTCAAGGATTTGAAGGAGGCGGGCGACTGGGGTTGGTGCTTGTGCTGGAGTAATGGTGGTGGTGAGGCTGCCTCAGGAGTGGGCCTGGCAGGCTGTTCTCCTAATGACTGGACTGGCATCACTGAACCGTGGTTCTGATGCCAACATGTTGGACACCATGCTGCTGAAGAACGGATGGAAGGGGGGATCAGAGCGAAGGGCGGAGATGAGCAGCAGCACAGCCACTCTTTCAGCTCAGAAAGTGCTTTGGTGTCACTGCTACCACCAGTGCCACCCAGACTCTGTCAACAATACTTGCATGACTGATGGTTACTGCTTCACCAtggtgaaggaggaggaggggggtctGGTGGTACACACTGCAGGTTGTTTGCCTCTTGCCGGCTCCGAGTTCCAGTGCAGAgaCACGGGGAATGCACGGAGCGCTATCGAGTGTTGCACGGATCAGGACTATTGCAACAGAGACTTGAATCTTACTATTCCTCCACTTATGCCGTCAGATAACGATGACAGCAGTATTCAGTACATGGCTCTCTTCATTTCAATCACAGTCTGCAGCATCATCCTGGGTCTCATCCTCGTCTTCTTCTACTTCAGATATAAGCGTCAGGTGTCACGACCACGCTACAGTATCGAGCTGGAGCAGGAAGAGACCTACATCCCCCCTGGGGAGTCACTGAAGGACCTGATAGAGCATTCCCGCAGCGTCGGGTCTGGCTCTGGGTCAGGACTCCCTCTACTGGTGCAGCGCACCATCGCCAAGCAGATTCAGATGGTTAAGCAGATTGGAAAAGGACGATACGGAGAGGTCTGGATGGGCAagtggagaggagagagagttgCTGTCAAAGTCTTCTTCACCACAGAGGAAGAGAGTTGGTTCAGAGAGACTGAAATATACCAGACCTTCTTGATGAGACATGACAATATACTGGGATTCATAGCAGCAGATATTAAGGGAACCGGCTCATGGACTCAGCTCTACCTAATTACAGACTACCATGAGAATGGATCTTTATACGACTACCTCAAGTCCAACACCTTAGACGTCAAGGCTCTGCTGAAACTGGCCTACTCGTCCATATCAGGCCTCTGTCACCTGCACACTGAGATCTATGGCACACAGGGCAAACCAGCCATCGCACACCGAGACCTGAAGAGTAAAAACATCTTGGTAAAAAAGAATGGATTCTGCTGTATAGCAGACCTTGGACTGGCGGTCAAGTTTAACAGtGACACCAACGAGGTGGATATCCCTCCCAACCTCCGAGTTGGGACAAAGCGCTACATGCCGCCTGAAGTGCTGGAAGAGACCCTGAACAGGACCTACTTCCAGTCTTTTATAATGGCTGACATGTACAGTTTTGGCCTCATCGTTTGGGAAATGGCCCGACGTTGCATCTCTGGAGGCATTGTGGAGGAGTATCAGCTGCCCTATCATGACCTTGTGCCCACTGATCCGTCCTATGAGGACATGATAGAAGTCGTCTGCATTAAGAAACAAAGACCTTCATTTGCTAACCGCTGGAGCAGTGATGAGTGTCTACGGCAGATGGGAAAACTGATGTCTGAGTGCTGGGCTCACAACCCAGCTTCTCGCCTCACAGCGCTGAGAGTGAAGAAGACCCTAGCGAAGATGTTGGAGACCCAAGACATCAAACTGTGACGGAGAGTTAAGAGAGATGCTCTCATCACCAGGGACTTGTGACTGCCACTGGCATAGCGCCACTTACACTGGCCAATAGAAGAAAGGGAAGATAAAAAAGAGAGACTATGAATGATAAGACAAAGGATACTGACAGAGAGGATGAGTGATGGCGATAACGGTAGACAGGGAGCCAGAAAAATGAGGCAAAAGATTTATTATGTCAGGGGAAATCTGCCTTCCTGTTGTCTGAGCTGCCTCTGCCTCAGACCAAGTGTTCAGGTTGTGCTTTCTGTGAAAGCTGAGTAGTTGTCGGGTCCAGACTGTACCATAGGGCAGGAGGACAGGGACCCTTGCAGGTGTGGAGCCCTAAAGTCCTCATTAGTTCTAAACAGAGGAAGCTCTGCCCTTCTAAAGCCATATAGCAGTATTCTATGTACAGTCTTTTGTACTGTCACAGCTgcctttgtgtttctttttttgactGTCACTGTCAACCATCCAAAGAAATGTCTAATTCATGCTCAGTGACCTCATTGTcaattatgttattattattattattgcaaaaCAAAGTAAGACAAAATTTATGATAAATCATATGTCCAGAAGGAACAGATATTTCTATATAGTATTCCTATGTAAATTTTATTTCAATGTTAAAATAAGACCTCTACGTGAAACATGTATCATCATTGATGAATTTGTGAAAGTTGGTTGTCCTTCAGAGCTGAGACGAAGGCCTTGCTCTCCCTTTCCACTCGCAATTCATTTGTACATAATTGAGCTGAAATCTATTGATAATTATTGCCTTTCTGgatgttaaaatgtgtttttgatgaTTTGTGTACAGAATATGTCCCGTCCACTCTACCACTATGGCATGTGCCTTATTTAATCTGTACATATGTGATTAATAAGAGTGTATGAGTGGATCTGGATAACATTCCCCCAATAAAAACAACTATGTGTCTCAAA
>XM_039779259.1
GGTGGGAGCTGTACGCAGGACGACGCGAGATTTAACCAGCCCCAAACGCGTGGTACACTTGGAAAAGTCTGCCGCAAGACAGAgggacacacatgcaaacaaaacagagcacgGTAGAGTTCAAAACAAGACAAATTGGGATCCTGTCGAGCTGCTGTTGAACCGAAAAGGAGACGagaAAGACGAGTGCTGGAGCGGTAGCTGGGTACAGTGACAGGATGCTTTCTGATGACCTATGTGTGGATGGCTGTCAGTGTGGAGTAGTGCTGGAGGCTGCGGGGCTGCTGTGTGCTGTGGGAAGTTCCTGAGAGTGCAGAAAGGCCGAGTGGCAGTCACTCACAGAGAGACACTTGTGCAGAAAGTGGACTGGTGCTATTTCACGGAAGGATATAAAACCCAGTCTTACACCTCTGCCTCTTTGCACCGGTGTGTTCGTTGTGGCTGCGCCTCAAGGATTTGAAGGAGGCGGGCGACTGGGGTTGGTGCTTGTGCTGGAGTAATGGTGGTGGTGAGGCTGCCTCAGGAGTGGGCCTGGCAGGCTGTTCTCCTAATGACTGGACTGGCATCACTGAACCGTGGTTCTGATGCCAACATGTTGGACACCATGCTGCTGAAGAACGGATGGAAGGGGGGATCAGAGCGAAGGGCGGAGATGAGCAGCAGCACAGCCACTCTTTCAGCTCAGAAAGTGCTTTGGTGTCACTGCTACCACCAGTGCCACCCAGACTCTGTCAACAATACTTGCATGACTGATGGTTACTGCTTCACCAtggtgaaggaggaggaggggggtctGGTGGTACACACTGCAGGTTGTTTGCCTCTTGCCGGCTCCGAGTTCCAGTGCAGAgaCACGGGGAATGCACGGAGCGCTATCGAGTGTTGCACGGATCAGGACTATTGCAACAGAGACTTGAATCTTACTATTCCTCCACTTATGCCGTCAGATAACGATGACAGCAGTATTCAGTACATGGCTCTCTTCATTTCAATCACAGTCTGCAGCATCATCCTGGGTCTCATCCTCGTCTTCTTCTACTTCAGATATAAGCGTCAGGTGTCACGACCACGCTACAGTATCGAGCTGGAGCAGGAAGAGACCTACATCCCCCCTGGGGAGTCACTGAAGGACCTGATAGAGCATTCCCGCAGCGTCGGGTCTGGCTCTGGGTCAGGACTCCCTCTACTGGTGCAGCGCACCATCGCCAAGCAGATTCAGATGGTTAAGCAGATTGGAAAAGGACGATACGGAGAGGTCTGGATGGGCAagtggagaggagagagagttgCTGTCAAAGTCTTCTTCACCACAGAGGAAGAGAGTTGGTTCAGAGAGACTGAAATATACCAGACCTTCTTGATGAGACATGACAATATACTGGGATTCATAGCAGCAGATATTAAGGGAACCGGCTCATGGACTCAGCTCTACCTAATTACAGACTACCATGAGAATGGATCTTTATACGACTACCTCAAGTCCAACACCTTAGACGTCAAGGCTCTGCTGAAACTGGCCTACTCGTCCATATCAGGCCTCTGTCACCTGCACACTGAGATCTATGGCACACAGGGCAAACCAGCCATCGCACACCGAGACCTGAAGAGTAAAAACATCTTGGTAAAAAAGAATGGATTCTGCTGTATAGCAGACCTTGGACTGGCGGTCAAGTTTAACAGtGACACCAACGAGGTGGATATCCCTCCCAACCTCCGAGTTGGGACAAAGCGCTACATGCCGCCTGAAGTGCTGGAAGAGACCCTGAACAGGACCTACTTCCAGTCTTTTATAATGGCTGACATGTACAGTTTTGGCCTCATCGTTTGGGAAATGGCCCGACGTTGCATCTCTGGAGGCATTGTGGAGGAGTATCAGCTGCCCTATCATGACCTTGTGCCCACTGATCCGTCCTATGAGGACATGATAGAAGTCGTCTGCATTAAGAAACAAAGACCTTCATTTGCTAACCGCTGGAGCAGTGATGAGTGTCTACGGCAGATGGGAAAACTGATGTCTGAGTGCTGGGCTCACAACCCAGCTTCTCGCCTCACAGCGCTGAGAGTGAAGAAGACCCTAGCGAAGATGTTGGAGACCCAAGACATCAAACTGTGACGGAGAGTTAAGAGAGATGCTCTCATCACCAGGGACTTGTGACTGCCACTGGCATAGCGCCACTTACACTGGCCAATAGAAGAAAGGGAAGATAAAAAAGAGAGACTATGAATGATAAGACAAAGGATACTGACAGAGAGGATGAGTGATGGCGATAACGGTAGACAGGGAGCCAGAAAAATGAGGCAAAAGATTTATTATGTCAGGGGAAATCTGCCTTCCTGTTGTCTGAGCTGCCTCTGCCTCAGACCAAGTGTTCAGGTTGTGCTTTCTGTGAAAGCTGAGTAGTTGTCGGGTCCAGACTGTACCATAGGGCAGGAGGACAGGGACCCTTGCAGGTGTGGAGCCCTAAAGTCCTCATTAGTTCTAAACAGAGGAAGCTCTGCCCTTCTAAAGCCATATAGCAGTATTCTATGTACAGTCTTTTGTACTGTCACAGCTgcctttgtgtttctttttttgactGTCACTGTCAACCATCCAAAGAAATGTCTAATTCATGCTCAGTGACCTCATTGTcaattatgttattattattattattgcaaaaCAAAGTAAGACAAAATTTATGATAAATCATATGTCCAGAAGGAACAGATATTTCTATATAGTATTCCTATGTAAATTTTATTTCAATGTTAAAATAAGACCTCTACGTGAAACATGTATCATCATTGATGAATTTGTGAAAGTTGGTTGTCCTTCAGAGCTGAGACGAAGGCCTTGCTCTCCCTTTCCACTCGCAATTCATTTGTACATAATTGAGCTGAAATCTATTGATAATTATTGCCTTTCTGgatgttaaaatgtgtttttgatgaTTTGTGTACAGAATATGTCCCGTCCACTCTACCACTATGGCATGTGCCTTATTTAATCTGTACATATGTGATTAATAAGAGTGTATGAGTGGATCTGGATAACATTCCCCCAATAAAAACAACTATGTGTCTCAAA

Function

symbol description
bmpr1b Enables ATP binding activity; SMAD binding activity; and transmembrane receptor protein serine/threonine kinase activity. Involved in several processes, including BMP signaling pathway; positive regulation of bone mineralization; and positive regulation of osteoblast differentiation. Predicted to be integral component of plasma membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Implicated in brachydactyly type A1D; brachydactyly type A2; and osteochondrodysplasia. Biomarker of asthma and pulmonary hypertension.

NR:

description
bone morphogenetic protein receptor type-1B-like

GO:

id name namespace
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0023014 signal transduction by protein phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function
GO:0005024 transforming growth factor beta-activated receptor activity molecular_function

KEGG:

id description
K13578 BMPR1B, ALK6, CDw293; bone morphogenetic protein receptor type-1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779258.1 True 3234 mRNA 0.48 14 18906742 18966325
XM_039779259.1 False 3070 mRNA 0.48 13 18906742 18966325

Neighbor

gene id symbol gene type direction distance location
pdlim5b LOC104950678,LOC102795075,LOC100697721 coding upstream 880 18868353 ~ 18905862 (+)
opn4xa LOC103360637 coding upstream 41855 18859268 ~ 18864887 (+)
LOC120545005 wdr70 coding upstream 72076 18772640 ~ 18834666 (+)
cplane1 NA coding upstream 134545 18752044 ~ 18772197 (+)
LOC120545567 LOC102210433,LOC104924646,LOC102792360,LOC100707569,LOC104958897 coding upstream 180358 18723885 ~ 18726384 (+)
glis3 NA coding downstream 210814 19177139 ~ 19193398 (+)
rfx3 rfx3 coding downstream 229331 19195656 ~ 19213465 (+)
LOC120545863 NA coding downstream 307072 19273397 ~ 19274633 (+)
mlana mlana coding downstream 352647 19318972 ~ 19322239 (+)
exosc2 exosc2 coding downstream 475251 19441576 ~ 19447599 (+)
G175973 NA non-coding upstream 52194 18851078 ~ 18854548 (+)
G175974 NA non-coding upstream 69988 18836175 ~ 18836754 (+)
G175925 LOC103360647,LOC104958910,LOC102220109 non-coding upstream 232777 18670383 ~ 18673965 (+)
G175917 NA non-coding upstream 248458 18657690 ~ 18658284 (+)
G175891 NA non-coding upstream 318449 18587759 ~ 18588293 (+)
G176173 LOC104959907,LOC106527788,LOC107745368,LOC106563285 non-coding downstream 521985 19488310 ~ 19492082 (+)
G176177 NA non-coding downstream 529711 19496036 ~ 19502184 (+)
G176225 LOC104956387,LOC101069739 non-coding downstream 596921 19563246 ~ 19565919 (+)
G176226 LOC103367784 non-coding downstream 600614 19566939 ~ 19567169 (+)
LOC120546000 NA non-coding downstream 624417 19590742 ~ 19593712 (+)
srsf9 srsf9,LOC104958899,LOC100707309 other upstream 182957 18676021 ~ 18723785 (+)
LOC120545610 NA other upstream 249123 18656524 ~ 18657619 (+)
cabp7b cabp7,LOC104925332 other upstream 255673 18635026 ~ 18651069 (+)
myo1hb LOC103374943,LOC101465300,LOC102786650 other upstream 358601 18536631 ~ 18548141 (+)
tmem120b tmem120b,LOC101471304,LOC102195879 other upstream 506296 18391739 ~ 18400446 (+)
LOC120545529 ermp1,LOC102800265 other downstream 413925 19380250 ~ 19402379 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other downstream 945511 19911836 ~ 19914680 (+)
pappaa pappa other downstream 1549022 20515347 ~ 20620786 (+)
G176526 NA other downstream 1980359 20946684 ~ 20947055 (+)
G176753 NA other downstream 3312555 22278880 ~ 22282163 (+)

Expression


Co-expression Network