dnajc21 (dnajc21)


Basic Information

Item Value
gene id dnajc21
gene name dnajc21
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 22377113 ~ 22384622 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779294.1
AGACCGATTCTCGCGAGATTTAGCGGCACCATACAGTGGATAGGGTTTATGATGCTTATGGTTCTAGCAACCGGTCGTAAATTAACTTATCGCATAGAAGCTGTTTGACAGTGGTAAAGGACATTGTGTGTATTTAAATATGTAAGGCCAAAACATTATAATATCATCTTCTCTAATATACTGTGAGAAGTCTGGATACTTTAAGAGATAGAATAGAAATGCTGCAGTTAGCATATCTAGCTACATGCTGCAGTTAGCTTTGACTGGGACAACGTGAAGAACATCTTTACAGAACATTTATCCTAGAGTCAACTCTGTCTTTATAGTTAGCTAACAATGAAGTGTCACTATGAAATCTTGGGTGTGAAACGAGACGCAGGAGACGATGAGTTGAAGAAAACGTATCGTAAATTAGCATTGAAGTGGCATCCGGATAAAAACTTGGACAATGCTGAAGATGCGGCGGAGCAGTTCAAGCTGATTCAGGCAGCTTATGAGGTCCTGAGTGATCCGCAGGAGAGAGCTTGGTATGACAATCATAGGGAGGCTCTTCTGAAAGGAGGAATCAGTGGAGATTATGAAGATGACAGCATTGACCTGCTGCAGTACTTCACGGTCACCTGCTACTCTGGCTTTGGAGATGACGAGAAGGGCTTTTACACAGTCTACAGGAATCTCTTTGAGTCCATTGTAAAGGAGGAGATGGAGCACAGCAAGGTggaagatgaggaagaggaggagtttCCTCCCTTTGgagactctcagagtgactatGACACCGTAGTGCACGTGTTTTACGGCTACTGGCAGAGCTTCTGCACTCGTAAAAACTTTGCCTGGAAGGAGGAGTATGATTCGAGGCAGGCCTCCAACCGCTGGGAGAAAAGGGccatggagaaggagaacaagAAGACCAGAGAAAAGGCTCGAAAGGAGCGCAACGAGCTTGTGCGTCAACTCGTGGCTTTTGTTCGCAAGCGTGACCGGCGTGTGCAGGCCCACAGGAAGCTGGTGGAGGAGCAGAACGCTGAGAAGGTCAAGAAGGTGGAGGAGCTGAGGCGGGAGCAGAGGCTCAGACAGGCCAAACTGGCAGAGGAGTACAAGGAGCAAAGCTGGGCGGCCATGTCTGAACTTGAGAAGGAGCTGCAGCAGATAGAGGCTCAGTACGGAGAGGAGTTTGGAGATGCATCCGAGAGTGAGGAAGAAGAGCTGGATATGGACACACGGGAGAAGAACGGCGACGagggaggagATGCAAAGCAGCCCAATGGACACGAACTGACAATTGATGATTATTATGATGGTCTGTACTGCCCAGcctgtgacaaatccttcaaATCAGATAAAGCTATGAAAAACCATGAAAAATCAAAAAAGCACCGGGAGATGGTAGCGTTTCTACGGCAACAgctggaggaggaagatgatTTACTTGGTTTGAACCTGAACGGAAAGGAAGGAGGACAGGAGGaaaatgaggaggaggaagatgaggaggaagacaAGCCAAGGCAAAAgctgtccaaaaagcaaaagaggaaaaagaaacagaagaaaGTAGTACAGCCGAGTGCtccagaagaggaggaggaagaggaggaggaggaggaggaggaggaagaagagaaaccaACGTTGACCACATGCGAGGAAGATGCCCCCGATAAGTCAGAGAACACTACAGAGCCGGAGAAGCAGGACGCTCCCCCTCCAACAGAAGTCAAGAGCAGCTCTGGGAAGACAAAAGGAAAGAagggaggaggaaaagaaaaaacgaaGAATGTCAAGTCAAACACAGAAGGAGAACAGCTTCCTGAGAAGGAAATAAACCTCCGCTGTGTGACCTGCGACAACGAGTTCTCCACAAGAAACAAGTTGTTTGACCATCTAAAGACCAGCGGTCACGCCAGCCCTCTTTCTTCAAACGCTCCCAACAGCTCCATGAACAAGAGCAAAAaagacaagaagaagaacagaTAACAGATTATCTGGTCAGATGAACCTAAAAGAGTTTGACTCAGCAGGGACACAGAAAACATAAGTATCCCGGTAggaaaataggaaaaaaaaaaaaaactttcaaaatggACTGCTGGAGAGCAGATAGTagatagtgttttttttaattacacaaTCTGATCAGTAAGAcagttgtgtatgtgtgagagagataagactgttttactattgtaaaatATAGTTTTCCAGATTAGTAGGATGAAATATTTTCAGTACCTTTCCCAGTAACTTATGAACGTCTCTGTACTGATAAACCTATGTGGAGAAAtccaaacatacagtatgtgcacagGATACACCCTATTATTAGATCCTTGAGTATCACCTCGTGGTTTGTCGTAGGGGTATCAGTGTATCATAAAAACAAAAGGTGACGACACTGCATGTTGGTATTTATACAACTCTGGATTGATTTGCATTAATGCCTCAGTAACCATATCTAACAATAAACTCCTGTATGTTGGATATTTCTGTACAAAACACGCACCTgta
>XM_039779295.1
AGACCGATTCTCGCGAGATTTAGCGGCACCATACAGTGGATAGGGTTTATGATGCTTATGGTTCTAGCAACCGGTCGTAAATTAACTTATCGCATAGAAGCTGTTTGACAGTGGTAAAGGACATTGTGTGTATTTAAATATGTAAGGCCAAAACATTATAATATCATCTTCTCTAATATACTGTGAGAAGTCTGGATACTTTAAGAGATAGAATAGAAATGCTGCAGTTAGCATATCTAGCTACATGCTGCAGTTAGCTTTGACTGGGACAACGTGAAGAACATCTTTACAGAACATTTATCCTAGAGTCAACTCTGTCTTTATAGTTAGCTAACAATGAAGTGTCACTATGAAATCTTGGGTGTGAAACGAGACGCAGGAGACGATGAGTTGAAGAAAACGTATCGTAAATTAGCATTGAAGTGGCATCCGGATAAAAACTTGGACAATGCTGAAGATGCGGCGGAGCAGTTCAAGCTGATTCAGGCAGCTTATGAGGTCCTGAGTGATCCGCAGGAGAGAGCTTGGTATGACAATCATAGGGAGGCTCTTCTGAAAGGAGGAATCAGTGGAGATTATGAAGATGACAGCATTGACCTGCTGCAGTACTTCACGGTCACCTGCTACTCTGGCTTTGGAGATGACGAGAAGGGCTTTTACACAGTCTACAGGAATCTCTTTGAGTCCATTGTAAAGGAGGAGATGGAGCACAGCAAGGTggaagatgaggaagaggaggagtttCCTCCCTTTGgagactctcagagtgactatGACACCGTAGTGCACGTGTTTTACGGCTACTGGCAGAGCTTCTGCACTCGTAAAAACTTTGCCTGGAAGGAGGAGTATGATTCGAGGCAGGCCTCCAACCGCTGGGAGAAAAGGGccatggagaaggagaacaagAAGACCAGAGAAAAGGCTCGAAAGGAGCGCAACGAGCTTGTGCGTCAACTCGTGGCTTTTGTTCGCAAGCGTGACCGGCGTGTGCAGGCCCACAGGAAGCTGGTGGAGGAGCAGAACGCTGAGAAGGTCAAGAAGGTGGAGGAGCTGAGGCGGGAGCAGAGGCTCAGACAGGCCAAACTGGCAGAGGAGTACAAGGAGCAAAGCTGGGCGGCCATGTCTGAACTTGAGAAGGAGCTGCAGCAGATAGAGGCTCAGTACGGAGAGGAGTTTGGAGATGCATCCGAGAGTGAGGAAGAAGAGCTGGATATGGACACACGGGAGAAGAACGGCGACGagggaggagATGCAAAGCAGCCCAATGGACACGAACTGACAATTGATGATTATTATGATGGTCTGTACTGCCCAGcctgtgacaaatccttcaaATCAGATAAAGCTATGAAAAACCATGAAAAATCAAAAAAGCACCGGGAGATGGTAGCGTTTCTACGGCAACAgctggaggaggaagatgatTTACTTGGTTTGAACCTGAACGGAAAGGAAGGAGGACAGGAGGaaaatgaggaggaggaagatgaggaggaagacaAGCCAAGGCAAAAgctgtccaaaaagcaaaagaggaaaaagaaacagaagaaaGTAGTACAGCCGAGTGCtccagaagaggaggaggaagaggaggaggaggaggaggaggaggaagaagagaaaccaACGTTGACCACATGCGAGGAAGATGCCCCCGATAAGTCAGAGAACACTACAGAGCCGGAGAAGCAGGACGCTCCCCCTCCAACAGAAGTCAAGAGCTCTGGGAAGACAAAAGGAAAGAagggaggaggaaaagaaaaaacgaaGAATGTCAAGTCAAACACAGAAGGAGAACAGCTTCCTGAGAAGGAAATAAACCTCCGCTGTGTGACCTGCGACAACGAGTTCTCCACAAGAAACAAGTTGTTTGACCATCTAAAGACCAGCGGTCACGCCAGCCCTCTTTCTTCAAACGCTCCCAACAGCTCCATGAACAAGAGCAAAAaagacaagaagaagaacagaTAACAGATTATCTGGTCAGATGAACCTAAAAGAGTTTGACTCAGCAGGGACACAGAAAACATAAGTATCCCGGTAggaaaataggaaaaaaaaaaaaaactttcaaaatggACTGCTGGAGAGCAGATAGTagatagtgttttttttaattacacaaTCTGATCAGTAAGAcagttgtgtatgtgtgagagagataagactgttttactattgtaaaatATAGTTTTCCAGATTAGTAGGATGAAATATTTTCAGTACCTTTCCCAGTAACTTATGAACGTCTCTGTACTGATAAACCTATGTGGAGAAAtccaaacatacagtatgtgcacagGATACACCCTATTATTAGATCCTTGAGTATCACCTCGTGGTTTGTCGTAGGGGTATCAGTGTATCATAAAAACAAAAGGTGACGACACTGCATGTTGGTATTTATACAACTCTGGATTGATTTGCATTAATGCCTCAGTAACCATATCTAACAATAAACTCCTGTATGTTGGATATTTCTGTACAAAACACGCACCTgta

Function

symbol description
dnajc21 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human DNAJC21 (DnaJ heat shock protein family (Hsp40) member C21).

NR:

description
dnaJ homolog subfamily C member 21

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K09506 DNAJA5; DnaJ homolog subfamily A member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779294.1 True 2511 mRNA 0.45 12 22377113 22384622
XM_039779295.1 False 2508 mRNA 0.45 12 22377113 22384622

Neighbor

gene id symbol gene type direction distance location
rad1 rad1 coding upstream 4322 22369167 ~ 22372791 (+)
ctif ctif coding upstream 149229 22168378 ~ 22227884 (+)
shc3 shc3,LOC102305817 coding upstream 290132 22056040 ~ 22086981 (+)
sema4d sema4d coding upstream 323072 22012935 ~ 22054041 (+)
LOC120545760 snca,LOC104940963,LOC100691213,LOC101468074,LOC107374679,LOC103142753,LOC102228921 coding upstream 414448 21950258 ~ 21962665 (+)
nedd4l nedd4l,LOC107584553 coding downstream 38960 22423582 ~ 22471548 (+)
esm1 esm1,LOC102788147 coding downstream 427496 22812118 ~ 22814146 (+)
arhgap24 arhgap24,LOC102789489 coding downstream 439678 22824300 ~ 22892523 (+)
ptpn13 ptpn13 coding downstream 552082 22936704 ~ 22984920 (+)
LOC120545187 NA coding downstream 600582 22985204 ~ 22989316 (+)
G176797 NA non-coding upstream 576 22375668 ~ 22376537 (+)
G176752 smad7 non-coding upstream 82529 22277694 ~ 22294584 (+)
G176723 NA non-coding upstream 319218 22057687 ~ 22057895 (+)
G176704 NA non-coding upstream 404670 21972109 ~ 21972443 (+)
G176703 NA non-coding upstream 405128 21971638 ~ 21971985 (+)
G176805 NA non-coding downstream 5642 22390264 ~ 22390687 (+)
G176808 agxt2,LOC104961017,LOC104961016,LOC103368456 non-coding downstream 11479 22396101 ~ 22399573 (+)
G176809 NA non-coding downstream 14987 22399609 ~ 22400328 (+)
G176810 NA non-coding downstream 15948 22400570 ~ 22402064 (+)
LOC120546009 NA non-coding downstream 89743 22474365 ~ 22477715 (+)
G176753 NA other upstream 94950 22278880 ~ 22282163 (+)
G176526 NA other upstream 1430058 20946684 ~ 20947055 (+)
pappaa pappa other upstream 1756327 20515347 ~ 20620786 (+)
LOC120545241 LOC105930800,LOC102780299,LOC103149678,LOC107095870,LOC100701678 other upstream 2462433 19911836 ~ 19914680 (+)
LOC120545529 ermp1,LOC102800265 other upstream 2974734 19380250 ~ 19402379 (+)
LOC120545252 NA other downstream 111791 22496413 ~ 22524405 (+)
G176870 cplx4 other downstream 147286 22531908 ~ 22537337 (+)
klhl8 klhl8 other downstream 613631 22998253 ~ 23008834 (+)
G177094 NA other downstream 798051 23182673 ~ 23184262 (+)
hnrpkl LOC103364541,LOC100706673,LOC103155138,LOC103473466 other downstream 1056361 23440983 ~ 23458605 (+)

Expression


Co-expression Network