LOC120545215


Basic Information

Item Value
gene id LOC120545215
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 595893 ~ 621737 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039779351.1
tcggACAGTGAATTCTCCGAATGCCATTCTCATGACAGATGTGCATACTGGCCGAGAGGAACAGAGGGTCCCACCTCTCACCACACGGACTGGAGGCCAGGGGCctgttccagaaagcagGAAGTTTGAAGCAAGTTTGAAGATGTCGAATGAGAAGAACCCGGAGGTGGTGGGCTGCGAGGCCTACATCATGAAGAACGTGTGGGAGATCCGAGCGAGAGAGTATGACCAGAAGATGCTGCAGGAGCACGAACGAAGAGAGAAGAGCGCTCTGCCGTCTATTAACCAGGATTGGGCAAATCGTTTGGCTGCTAGACAGGGACATTACAAAAGGGTGCAGAGGAAACCTAAACCTGCTGAGAATcagaccaacaacaacaacgtctGGAAGAGCAAGCTACCACAGGCTACTCCTACTCTTCCACGTGGTAAAGGTTCAGGTCCAATCGGCAGACCAGGAGAACAAAGCAGAGGCTTCTCCACTCCAGCCCCCAACTACAAGGACAAAAAGGGGCAGaacaatcattttaaaaggctacaATTACTCATGTTTATCAGCCAGACTCAACCTTCTGCTATGGTGTGGGGGAAATCATGGAAGTACAACAAATGCTTGCCATTACCAGCAGAGGGCGATGAAGCTAGATCAGACTGGGGCCAGTGCTGGATGTTTGCTACCCAGCAGCCTCACACTGAAGCAGGCAGCCCTTGGCTAAATGGACCCAACCCCAACTTGATGGATGCTGACAGCCTCCATCTCTGGAAGAAACCTGACTACCGGATGGTGGAATCACAAGAGCTAGACTTAAGTATTCCCACTGAGGAGTGGCAGATGTCCTGGAGAAAATCGGACAAAAAAAAGATGGAGGATGCATCTGTCACAAATGGAGAAAATGTCGCAAAATTTGGATTCTTCACCTCACTGGTGGAGACTCAGCACCAAAATGAAGCCTTGTCCTCATCAGAGTGGAGCGAGTCATGGAAATCCACCAAGCCAGCAAGTCAGCGGGATCCCTTTGCTGTTTCAAATGATGGTCTAATGAATGAGTCTATTGCTAAAAAGCGGGATGATAGAGGGATGAGCTCCAAGTGGGAAGAATGTTGGAGGCTTGTCAACCACCATGGCTGCAACAAATCCAAGTTGCCTCAAAAATCTCACAATCCAGAGTGGGCCGATTCGTGGAAAGCAGCCATGGTCGTCTTCAACAAGCACAAGAATTCAGATCCCTCTCTAAGGCAAGATCACAGTGGTACCTATGAGGATCACAGCCAGCTGAGAGAGTCACATCTCCACAAAGTCATGCTTGTGTCTCGTGAGCAGAAGCATAGAGATCTGTATGTGCAGCTCTGCAATGAATTTAATGCTCTGTCTGAATGGAGCAAGTCTTGGCAGGTGACCAAAAACAACTCAAAACCATGTGAAGAAATACAGAAAGTTCTGAAGAACTCGCCACCAATGATGGAGACTGCTTTGGAGACTCAAAAGGTGGATAACAACACAAAGGAGCATTATTCAACATTGGAGAAAGCAGACTCATGCTATGAGCAACTGAAACATGATGTGATCTATCACCCAAAGAAAGAATTTGCTCAATCTAAGCTGCGCCAtctgaaacatctggaaaatgtTATGTCTGCCACAGAATGGATTGACTCCTGGAAGACACTGAAACACAGAATGAGAATGGAGAGAAGAAGAATGAGGCCTGACCCTTCAAGGCCTTTCAGGGGATCTGAACAGGGAGGAGACATGAAGCCCAATGCCTCAGAGTGGAAAGACTCGTGGAAATTCACCTCTCAGCCCCTGCGCCAGGAGCCGGAGCCTTGGCAGCAGGGTTGGTCCTCCACGCCCCAAATCAGAGTAGATCATGCTAGGGTTCAGAACCACTTTGCGCCTATGGAACTCCCTAAGAATGGGCCAACCGTGGAGTGCATTTGGGGAGAATCATGGAGGTTCTTGAGGCGCCAGCACCAATCAGAACCTGGGCAGGGAAGGGCACAAACTAGCCAAGCAAGTTCAAGTGTGGCTTCCCAACATCCTGGTGTTTCACAGGCACAGAGAAGGTATGCTAGGTCAGTTAATGATTGGCAGGTGGCCTGGATGGTCTCAGAAACTCCGTTCCACCATGACAGACCCTCCTTAACCCAGTGGAGGGAAGCCTGGAGGTGGTCTGTCTTTCACACAGAGCACTGGACTGAGCAAGTGGCTGGAGAGAATGAAGTGGATGTGTTAATGGAGATTCAACCTAAGAGAGAGAAGATTTCCTTGCAGAGAGCCAAAGCTAAAATGAGCCGGTCTTTTGACAACCAGATGTTCAGGGAAAGATATCCTGAGAAACAGTGGGAGGCTTCATGGAGAGCTGGGTCACTTCTGAGCCATCAAACGAGTCATTATGGATCTTCAGGGATACCTGGAAAAAGCATGAGCGGCATTACACAGCAGCAACATACTGCTGGGCATGGATCTAAGTGGGGAAGGTCATTCAGGATCGCCAACCCCATGCCCCACATGGAGCAACCCTGGCTGAAGTCCTCTCCTAACCAATGTCACTATACAGTAATGTGGTCAAGAGGAAAGAACatacagaacaacaacaaaaacttaaGCAACAACCCTGCAACCTTCAAGCTATGGGGAAATTCCCATCGGTTCCTACAGGGGGCCAGCGCACAGATCAAAGACCAAACGTCTAAGACACCGGTTGACCCCAGGGTGATTATCCCAAACAAGGCCAAATCAAGGAAGCATTTGTACTCTAACATTGAGAAGGAGAAACAATCACAGAAGAAGTGGGCAGGATGCCACCTGTTGGGTAAAACTCAACCACTTCCCAAGAGAGGCCGTGCTTCCGGAAAGACACTTAAGATGGAGGACAAAACTGCAGAAAAGTTCTTTGAGGAGTGGGTAGAATCTTGGAGGCTCTCAGTCCGGCCTGGTGGTCTGAAAAAGCAGATGCCTGTCAAATCGTTCTCAGGTTGGGATGAGTCATGGAAGTGCCTCATTCCACCATACCCGCCGATGAATGGCCCCAAGGCCAAATAGAAGGCACGGCTCAGTCAACTGTCAGCTCAGTCAACTGTCAGCTCAGTCAAAACTTGCCACACATAAACCAtgttaattaataaaaatatttgaataattta
>XM_039779353.1
tggaCGCTGTTCTATTTTGAGCTAGGACAGCCCCTCAGACATCCATCAGATTCATGACTCTGGGAGTGACAGTATAAAAGAGCAGAGCTGCCTGCAGCATCTCCCACAGATCCTAAACAGCATTACCCCTGAAGTTTGAAGCAAGTTTGAAGATGTCGAATGAGAAGAACCCGGAGGTGGTGGGCTGCGAGGCCTACATCATGAAGAACGTGTGGGAGATCCGAGCGAGAGAGTATGACCAGAAGATGCTGCAGGAGCACGAACGAAGAGAGAAGAGCGCTCTGCCGTCTATTAACCAGGATTGGGCAAATCGTTTGGCTGCTAGACAGGGACATTACAAAAGGGTGCAGAGGAAACCTAAACCTGCTGAGAATcagaccaacaacaacaacgtctGGAAGAGCAAGCTACCACAGGCTACTCCTACTCTTCCACGTGGTAAAGGTTCAGGTCCAATCGGCAGACCAGGAGAACAAAGCAGAGGCTTCTCCACTCCAGCCCCCAACTACAAGGACAAAAAGGGGCAGaacaatcattttaaaaggctacaATTACTCATGTTTATCAGCCAGACTCAACCTTCTGCTATGGTGTGGGGGAAATCATGGAAGTACAACAAATGCTTGCCATTACCAGCAGAGGGCGATGAAGCTAGATCAGACTGGGGCCAGTGCTGGATGTTTGCTACCCAGCAGCCTCACACTGAAGCAGGCAGCCCTTGGCTAAATGGACCCAACCCCAACTTGATGGATGCTGACAGCCTCCATCTCTGGAAGAAACCTGACTACCGGATGGTGGAATCACAAGAGCTAGACTTAAGTATTCCCACTGAGGAGTGGCAGATGTCCTGGAGAAAATCGGACAAAAAAAAGATGGAGGATGCATCTGTCACAAATGGAGAAAATGTCGCAAAATTTGGATTCTTCACCTCACTGGTGGAGACTCAGCACCAAAATGAAGCCTTGTCCTCATCAGAGTGGAGCGAGTCATGGAAATCCACCAAGCCAGCAAGTCAGCGGGATCCCTTTGCTGTTTCAAATGATGGTCTAATGAATGAGTCTATTGCTAAAAAGCGGGATGATAGAGGGATGAGCTCCAAGTGGGAAGAATGTTGGAGGCTTGTCAACCACCATGGCTGCAACAAATCCAAGTTGCCTCAAAAATCTCACAATCCAGAGTGGGCCGATTCGTGGAAAGCAGCCATGGTCGTCTTCAACAAGCACAAGAATTCAGATCCCTCTCTAAGGCAAGATCACAGTGGTACCTATGAGGATCACAGCCAGCTGAGAGAGTCACATCTCCACAAAGTCATGCTTGTGTCTCGTGAGCAGAAGCATAGAGATCTGTATGTGCAGCTCTGCAATGAATTTAATGCTCTGTCTGAATGGAGCAAGTCTTGGCAGGTGACCAAAAACAACTCAAAACCATGTGAAGAAATACAGAAAGTTCTGAAGAACTCGCCACCAATGATGGAGACTGCTTTGGAGACTCAAAAGGTGGATAACAACACAAAGGAGCATTATTCAACATTGGAGAAAGCAGACTCATGCTATGAGCAACTGAAACATGATGTGATCTATCACCCAAAGAAAGAATTTGCTCAATCTAAGCTGCGCCAtctgaaacatctggaaaatgtTATGTCTGCCACAGAATGGATTGACTCCTGGAAGACACTGAAACACAGAATGAGAATGGAGAGAAGAAGAATGAGGCCTGACCCTTCAAGGCCTTTCAGGGGATCTGAACAGGGAGGAGACATGAAGCCCAATGCCTCAGAGTGGAAAGACTCGTGGAAATTCACCTCTCAGCCCCTGCGCCAGGAGCCGGAGCCTTGGCAGCAGGGTTGGTCCTCCACGCCCCAAATCAGAGTAGATCATGCTAGGGTTCAGAACCACTTTGCGCCTATGGAACTCCCTAAGAATGGGCCAACCGTGGAGTGCATTTGGGGAGAATCATGGAGGTTCTTGAGGCGCCAGCACCAATCAGAACCTGGGCAGGGAAGGGCACAAACTAGCCAAGCAAGTTCAAGTGTGGCTTCCCAACATCCTGGTGTTTCACAGGCACAGAGAAGGTATGCTAGGTCAGTTAATGATTGGCAGGTGGCCTGGATGGTCTCAGAAACTCCGTTCCACCATGACAGACCCTCCTTAACCCAGTGGAGGGAAGCCTGGAGGTGGTCTGTCTTTCACACAGAGCACTGGACTGAGCAAGTGGCTGGAGAGAATGAAGTGGATGTGTTAATGGAGATTCAACCTAAGAGAGAGAAGATTTCCTTGCAGAGAGCCAAAGCTAAAATGAGCCGGTCTTTTGACAACCAGATGTTCAGGGAAAGATATCCTGAGAAACAGTGGGAGGCTTCATGGAGAGCTGGGTCACTTCTGAGCCATCAAACGAGTCATTATGGATCTTCAGGGATACCTGGAAAAAGCATGAGCGGCATTACACAGCAGCAACATACTGCTGGGCATGGATCTAAGTGGGGAAGGTCATTCAGGATCGCCAACCCCATGCCCCACATGGAGCAACCCTGGCTGAAGTCCTCTCCTAACCAATGTCACTATACAGTAATGTGGTCAAGAGGAAAGAACatacagaacaacaacaaaaacttaaGCAACAACCCTGCAACCTTCAAGCTATGGGGAAATTCCCATCGGTTCCTACAGGGGGCCAGCGCACAGATCAAAGACCAAACGTCTAAGACACCGGTTGACCCCAGGGTGATTATCCCAAACAAGGCCAAATCAAGGAAGCATTTGTACTCTAACATTGAGAAGGAGAAACAATCACAGAAGAAGTGGGCAGGATGCCACCTGTTGGGTAAAACTCAACCACTTCCCAAGAGAGGCCGTGCTTCCGGAAAGACACTTAAGATGGAGGACAAAACTGCAGAAAAGTTCTTTGAGGAGTGGGTAGAATCTTGGAGGCTCTCAGTCCGGCCTGGTGGTCTGAAAAAGCAGATGCCTGTCAAATCGTTCTCAGGTTGGGATGAGTCATGGAAGTGCCTCATTCCACCATACCCGCCGATGAATGGCCCCAAGGCCAAATAGAAGGCACGGCTCAGTCAACTGTCAGCTCAGTCAACTGTCAGCTCAGTCAAAACTTGCCACACATAAACCAtgttaattaataaaaatatttgaataattta

Function

GO: NA

KEGG:

id description
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039779351.1 False 3144 mRNA 0.49 3 595893 621737
XM_039779353.1 True 3154 mRNA 0.48 3 595893 605140

Neighbor

gene id symbol gene type direction distance location
nek6 LOC102297357,LOC102792581,LOC100704402,LOC104936759,LOC101471322 coding downstream 31111 533379 ~ 564782 (-)
LOC120545827 NA coding downstream 136617 458084 ~ 459276 (-)
mapkap1 mapkap1,LOC102781088 coding downstream 253516 302496 ~ 342377 (-)
LOC120546082 LOC103362445,LOC102082667,LOC102197263,LOC102301125,LOC101469328 coding downstream 411110 144208 ~ 184783 (-)
crb2a NA coding upstream 3223 624960 ~ 659720 (-)
slc12a2 NA coding upstream 130675 752412 ~ 846977 (-)
slc27a6 slc27a6 coding upstream 262132 883869 ~ 951206 (-)
lmnb1 lmnb1 coding upstream 345262 966999 ~ 987881 (-)
LOC120545116 LOC103364476 coding upstream 390407 1012144 ~ 1033929 (-)
G171719 NA non-coding downstream 24989 570301 ~ 570904 (-)
G171718 NA non-coding downstream 28551 567019 ~ 567342 (-)
G171680 NA non-coding downstream 76823 518840 ~ 519070 (-)
G171674 NA non-coding downstream 115742 479794 ~ 480151 (-)
G171636 NA non-coding downstream 300608 295066 ~ 295285 (-)
LOC120545599 fbxw2 non-coding upstream 50735 672472 ~ 745412 (-)
G171792 NA non-coding upstream 258841 880578 ~ 880789 (-)
G171793 NA non-coding upstream 263715 885452 ~ 885653 (-)
G171794 NA non-coding upstream 268184 889921 ~ 890164 (-)
G171795 NA non-coding upstream 269423 891160 ~ 891377 (-)
prrc1 prrc1 other upstream 372700 994437 ~ 1008188 (-)
megf10 megf10 other upstream 419061 1040798 ~ 1146587 (-)
G171868 NA other upstream 548466 1170203 ~ 1170789 (-)
G172032 NA other upstream 974779 1596516 ~ 1602156 (-)
G172311 NA other upstream 2363085 2984822 ~ 2985260 (-)

Expression


Co-expression Network